RNA–Protein interactions for RNA: ENST00000635562.1

PSPC1-208, Transcript of paraspeckle component 1, humanhuman

TSL 3

Gene PSPC1, Length 422 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-208ENST00000635562 SMSP52788 366 aa2.9□□□□□ -1.95
PSPC1-208ENST00000635562 PRMT2P55345 433 aa2.9□□□□□ -1.95
PSPC1-208ENST00000635562 SLC37A1P57057 533 aa2.9□□□□□ -1.95
PSPC1-208ENST00000635562 ST8SIA6P61647 398 aa2.9□□□□□ -1.95
PSPC1-208ENST00000635562 GCNT1Q02742 428 aa2.9□□□□□ -1.95
PSPC1-208ENST00000635562 TFF2Q03403 129 aa2.9□□□□□ -1.95
PSPC1-208ENST00000635562 TMEM115Q12893 351 aaPredicted RBP2.9□□□□□ -1.95
PSPC1-208ENST00000635562 SLC10A2Q12908 348 aaPredicted RBP2.9□□□□□ -1.95
PSPC1-208ENST00000635562 PDZK1IP1Q13113 114 aa2.9□□□□□ -1.95
PSPC1-208ENST00000635562 SRSF5Q13243 272 aaKnown RBP2.9□□□□□ -1.95
PSPC1-208ENST00000635562 PPIL2Q13356 520 aa2.9□□□□□ -1.95
PSPC1-208ENST00000635562 SNTB2Q13425 540 aaKnown RBP2.9□□□□□ -1.95
PSPC1-208ENST00000635562 OLIG2Q13516 323 aa2.9□□□□□ -1.95
PSPC1-208ENST00000635562 TSTA3Q13630 321 aaPredicted RBP2.9□□□□□ -1.95
PSPC1-208ENST00000635562 IL11RAQ14626 422 aa2.9□□□□□ -1.95
PSPC1-208ENST00000635562 RRS1Q15050 365 aaKnown RBP2.9□□□□□ -1.95
PSPC1-208ENST00000635562 PGM5Q15124 567 aa2.9□□□□□ -1.95
PSPC1-208ENST00000635562 MTHFSDQ2M296 383 aaKnown RBP2.9□□□□□ -1.95
PSPC1-208ENST00000635562 RGS21Q2M5E4 152 aa2.9□□□□□ -1.95
PSPC1-208ENST00000635562 KLHL40Q2TBA0 621 aa2.9□□□□□ -1.95
PSPC1-208ENST00000635562 BCL7AQ4VC05 210 aa2.9□□□□□ -1.95
PSPC1-208ENST00000635562 LRRC24Q50LG9 513 aa2.9□□□□□ -1.95
PSPC1-208ENST00000635562 FAM98BQ52LJ0 330 aaKnown RBP2.9□□□□□ -1.95
PSPC1-208ENST00000635562 IGSF11Q5DX21 431 aa2.9□□□□□ -1.95
PSPC1-208ENST00000635562 PPP6R3Q5H9R7 873 aaPredicted RBP2.9□□□□□ -1.95
PSPC1-208ENST00000635562 CBWD5Q5RIA9 395 aa2.9□□□□□ -1.95
PSPC1-208ENST00000635562 RARS2Q5T160 578 aaKnown RBP2.9□□□□□ -1.95
PSPC1-208ENST00000635562 CLEC6AQ6EIG7 209 aa2.9□□□□□ -1.95
PSPC1-208ENST00000635562 ZNF425Q6IV72 752 aa2.9□□□□□ -1.95
PSPC1-208ENST00000635562 KIAA1161Q6NSJ0 714 aa2.9□□□□□ -1.95
PSPC1-208ENST00000635562 CASC4Q6P4E1 433 aa2.9□□□□□ -1.95
PSPC1-208ENST00000635562 TMEM88Q6PEY1 159 aa2.9□□□□□ -1.95
PSPC1-208ENST00000635562 TRIM65Q6PJ69 517 aa2.9□□□□□ -1.95
PSPC1-208ENST00000635562 DCDC5Q6ZRR9 648 aa2.9□□□□□ -1.95
PSPC1-208ENST00000635562 MTSS1LQ765P7 747 aa2.9□□□□□ -1.95
PSPC1-208ENST00000635562 EFL1Q7Z2Z2 1120 aaKnown RBP2.9□□□□□ -1.95
PSPC1-208ENST00000635562 HAUS6Q7Z4H7 955 aa2.9□□□□□ -1.95
PSPC1-208ENST00000635562 TFAP2DQ7Z6R9 452 aa2.9□□□□□ -1.95
PSPC1-208ENST00000635562 VPS36Q86VN1 386 aa2.9□□□□□ -1.95
PSPC1-208ENST00000635562 FJX1Q86VR8 437 aa2.9□□□□□ -1.95
PSPC1-208ENST00000635562 CAMK1DQ8IU85 385 aa2.9□□□□□ -1.95
PSPC1-208ENST00000635562 RHPN2Q8IUC4 686 aa2.9□□□□□ -1.95
PSPC1-208ENST00000635562 TICAM1Q8IUC6 712 aa2.9□□□□□ -1.95
PSPC1-208ENST00000635562 CRYBG2Q8N1P7 616 aa2.9□□□□□ -1.95
PSPC1-208ENST00000635562 FSIP1Q8NA03 581 aa2.9□□□□□ -1.95
PSPC1-208ENST00000635562 CAMKVQ8NCB2 501 aa2.9□□□□□ -1.95
PSPC1-208ENST00000635562 DBF4BQ8NFT6 615 aa2.9□□□□□ -1.95
PSPC1-208ENST00000635562 OR2T3Q8NH03 318 aa2.9□□□□□ -1.95
PSPC1-208ENST00000635562 GRAPLQ8TC17 118 aaPredicted RBP2.9□□□□□ -1.95
PSPC1-208ENST00000635562 GPT2Q8TD30 523 aa2.9□□□□□ -1.95
PSPC1-208ENST00000635562 ELP5Q8TE02 316 aa2.9□□□□□ -1.95
PSPC1-208ENST00000635562 PDCD6IPQ8WUM4 868 aaKnown RBP2.9□□□□□ -1.95
PSPC1-208ENST00000635562 DPF1Q92782 380 aa2.9□□□□□ -1.95
PSPC1-208ENST00000635562 KAT2AQ92830 837 aa2.9□□□□□ -1.95
PSPC1-208ENST00000635562 APBB2Q92870 758 aa2.9□□□□□ -1.95
PSPC1-208ENST00000635562 ISG20Q96AZ6 181 aaKnown RBP2.9□□□□□ -1.95
PSPC1-208ENST00000635562 ELP4Q96EB1 424 aa2.9□□□□□ -1.95
PSPC1-208ENST00000635562 SAAL1Q96ER3 474 aa2.9□□□□□ -1.95
PSPC1-208ENST00000635562 SAT2Q96F10 170 aaPredicted RBP2.9□□□□□ -1.95
PSPC1-208ENST00000635562 RBM41Q96IZ5 413 aaKnown RBP2.9□□□□□ -1.95
PSPC1-208ENST00000635562 RITA1Q96K30 269 aa2.9□□□□□ -1.95
PSPC1-208ENST00000635562 ZNF560Q96MR9 790 aa2.9□□□□□ -1.95
PSPC1-208ENST00000635562 ZNF778Q96MU6 729 aa2.9□□□□□ -1.95
PSPC1-208ENST00000635562 NECTIN4Q96NY8 510 aa2.9□□□□□ -1.95
PSPC1-208ENST00000635562 RPRD1AQ96P16 312 aaPredicted RBP2.9□□□□□ -1.95
PSPC1-208ENST00000635562 OR1F2PQ96R84 312 aa2.9□□□□□ -1.95
PSPC1-208ENST00000635562 CYTH2Q99418 400 aa2.9□□□□□ -1.95
PSPC1-208ENST00000635562 SSX3Q99909 188 aa2.9□□□□□ -1.95
PSPC1-208ENST00000635562 JPH2Q9BR39 696 aaPredicted RBP2.9□□□□□ -1.95
PSPC1-208ENST00000635562 C9orf16Q9BUW7 83 aa2.9□□□□□ -1.95
PSPC1-208ENST00000635562 FRMD8P1Q9BZ68 369 aaPredicted RBP2.9□□□□□ -1.95
PSPC1-208ENST00000635562 SEMA4CQ9C0C4 833 aa2.9□□□□□ -1.95
PSPC1-208ENST00000635562 TMEM117Q9H0C3 514 aa2.9□□□□□ -1.95
PSPC1-208ENST00000635562 VCX2Q9H322 139 aa2.9□□□□□ -1.95
PSPC1-208ENST00000635562 POLR1BQ9H9Y6 1135 aa2.9□□□□□ -1.95
PSPC1-208ENST00000635562 MLXIPLQ9NP71 852 aa2.9□□□□□ -1.95
PSPC1-208ENST00000635562 TLR8Q9NR97 1041 aaKnown RBP2.9□□□□□ -1.95
PSPC1-208ENST00000635562 IL17RBQ9NRM6 502 aa2.9□□□□□ -1.95
PSPC1-208ENST00000635562 ASB6Q9NWX5 421 aa2.9□□□□□ -1.95
PSPC1-208ENST00000635562 P4HTMQ9NXG6 502 aa2.9□□□□□ -1.95
PSPC1-208ENST00000635562 IL37Q9NZH6 218 aa2.9□□□□□ -1.95
PSPC1-208ENST00000635562 PKD2L2Q9NZM6 624 aa2.9□□□□□ -1.95
PSPC1-208ENST00000635562 FLRT1Q9NZU1 646 aa2.9□□□□□ -1.95
PSPC1-208ENST00000635562 UXTQ9UBK9 157 aaPredicted RBP2.9□□□□□ -1.95
PSPC1-208ENST00000635562 DBF4Q9UBU7 674 aaPredicted RBP2.9□□□□□ -1.95
PSPC1-208ENST00000635562 HMGXB4Q9UGU5 601 aa2.9□□□□□ -1.95
PSPC1-208ENST00000635562 CD207Q9UJ71 328 aa2.9□□□□□ -1.95
PSPC1-208ENST00000635562 ERVK-19Q9WJR5 959 aa2.9□□□□□ -1.95
PSPC1-208ENST00000635562 ADAM18Q9Y3Q7 739 aa2.9□□□□□ -1.95
PSPC1-208ENST00000635562 SIRT4Q9Y6E7 314 aaPredicted RBP2.9□□□□□ -1.95
PSPC1-208ENST00000635562 WNT6Q9Y6F9 365 aa2.9□□□□□ -1.95
PSPC1-208ENST00000635562 NCOA3Q9Y6Q9 1424 aa2.9□□□□□ -1.95
PSPC1-208ENST00000635562 UBE4BO95155 1302 aa2.9□□□□□ -1.95
PSPC1-208ENST00000635562 KANK1Q14678 1352 aa2.89□□□□□ -1.95
PSPC1-208ENST00000635562 TRBV2A0A0J9YWF9 115 aa2.89□□□□□ -1.95
PSPC1-208ENST00000635562 LRRC53A6NM62 1247 aa2.89□□□□□ -1.95
PSPC1-208ENST00000635562 C17orf100A8MU93 164 aa2.89□□□□□ -1.95
PSPC1-208ENST00000635562 BTBD18B2RXH4 712 aa2.89□□□□□ -1.95
PSPC1-208ENST00000635562 GOLGA6L19H0YKK7 550 aa2.89□□□□□ -1.95
PSPC1-208ENST00000635562 LGALS8O00214 317 aa2.89□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms