RNA–Protein interactions for RNA: ENST00000621474.4

CBWD3-217, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-217ENST00000621474 HGSO14964 777 aaPredicted RBP13.86□□□□□ -0.19
CBWD3-217ENST00000621474 RPN2P04844 631 aa13.86□□□□□ -0.19
CBWD3-217ENST00000621474 SPTBP11277 2137 aa13.86□□□□□ -0.19
CBWD3-217ENST00000621474 ERGP11308 486 aa13.86□□□□□ -0.19
CBWD3-217ENST00000621474 HGFP14210 728 aa13.86□□□□□ -0.19
CBWD3-217ENST00000621474 SHMT2P34897 504 aa13.86□□□□□ -0.19
CBWD3-217ENST00000621474 SPRP35270 261 aaPredicted RBP13.86□□□□□ -0.19
CBWD3-217ENST00000621474 GMPRP36959 345 aa13.86□□□□□ -0.19
CBWD3-217ENST00000621474 LSSP48449 732 aa13.86□□□□□ -0.19
CBWD3-217ENST00000621474 PPM1FP49593 454 aaPredicted RBP13.86□□□□□ -0.19
CBWD3-217ENST00000621474 FOXK2Q01167 660 aa13.86□□□□□ -0.19
CBWD3-217ENST00000621474 SLC29A2Q14542 456 aa13.86□□□□□ -0.19
CBWD3-217ENST00000621474 NAA30Q147X3 362 aaPredicted RBP13.86□□□□□ -0.19
CBWD3-217ENST00000621474 RTP5Q14D33 572 aa13.86□□□□□ -0.19
CBWD3-217ENST00000621474 C3orf38Q5JPI3 329 aa13.86□□□□□ -0.19
CBWD3-217ENST00000621474 IRGCQ6NXR0 463 aa13.86□□□□□ -0.19
CBWD3-217ENST00000621474 KLHL35Q6PF15 583 aa13.86□□□□□ -0.19
CBWD3-217ENST00000621474 PRSS42Q7Z5A4 293 aa13.86□□□□□ -0.19
CBWD3-217ENST00000621474 CMC1Q7Z7K0 106 aa13.86□□□□□ -0.19
CBWD3-217ENST00000621474 FBXO15Q8NCQ5 510 aaPredicted RBP13.86□□□□□ -0.19
CBWD3-217ENST00000621474 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.86□□□□□ -0.19
CBWD3-217ENST00000621474 RAD51AP1Q96B01 352 aa13.86□□□□□ -0.19
CBWD3-217ENST00000621474 FOPNLQ96NB1 174 aa13.86□□□□□ -0.19
CBWD3-217ENST00000621474 PAFAH2Q99487 392 aa13.86□□□□□ -0.19
CBWD3-217ENST00000621474 MAP3K3Q99759 626 aa13.86□□□□□ -0.19
CBWD3-217ENST00000621474 ZMYND15Q9H091 742 aa13.86□□□□□ -0.19
CBWD3-217ENST00000621474 POPDC3Q9HBV1 291 aa13.86□□□□□ -0.19
CBWD3-217ENST00000621474 OR6C2Q9NZP2 312 aa13.86□□□□□ -0.19
CBWD3-217ENST00000621474 POMT2Q9UKY4 750 aa13.86□□□□□ -0.19
CBWD3-217ENST00000621474 A0A087WUV0 522 aaPredicted RBP13.86□□□□□ -0.19
CBWD3-217ENST00000621474 CCDC187A0A096LP49 1063 aa13.86□□□□□ -0.19
CBWD3-217ENST00000621474 IGHV5-51A0A0C4DH38 117 aa13.86□□□□□ -0.19
CBWD3-217ENST00000621474 TOX3O15405 576 aaPredicted RBP13.86□□□□□ -0.19
CBWD3-217ENST00000621474 PHGDHO43175 533 aaKnown RBP13.86□□□□□ -0.19
CBWD3-217ENST00000621474 CHRM5P08912 532 aaPredicted RBP13.86□□□□□ -0.19
CBWD3-217ENST00000621474 ITIH1P19827 911 aa13.86□□□□□ -0.19
CBWD3-217ENST00000621474 PRDX3P30048 256 aaKnown RBP13.86□□□□□ -0.19
CBWD3-217ENST00000621474 CCNFP41002 786 aa13.86□□□□□ -0.19
CBWD3-217ENST00000621474 RGS4P49798 205 aa13.86□□□□□ -0.19
CBWD3-217ENST00000621474 IL2P60568 153 aa13.86□□□□□ -0.19
CBWD3-217ENST00000621474 BMPR2Q13873 1038 aa13.86□□□□□ -0.19
CBWD3-217ENST00000621474 UAP1Q16222 522 aaPredicted RBP13.86□□□□□ -0.19
CBWD3-217ENST00000621474 PHKG1Q16816 387 aa13.86□□□□□ -0.19
CBWD3-217ENST00000621474 LRRC8EQ6NSJ5 796 aa13.86□□□□□ -0.19
CBWD3-217ENST00000621474 RAB11FIP2Q7L804 512 aa13.86□□□□□ -0.19
CBWD3-217ENST00000621474 BMPERQ8N8U9 685 aa13.86□□□□□ -0.19
CBWD3-217ENST00000621474 UBXN4Q92575 508 aa13.86□□□□□ -0.19
CBWD3-217ENST00000621474 ZDHHC12Q96GR4 267 aa13.86□□□□□ -0.19
CBWD3-217ENST00000621474 PDLIM5Q96HC4 596 aaKnown RBP13.86□□□□□ -0.19
CBWD3-217ENST00000621474 OR2A14Q96R47 310 aa13.86□□□□□ -0.19
CBWD3-217ENST00000621474 DHRS4Q9BTZ2 278 aa13.86□□□□□ -0.19
CBWD3-217ENST00000621474 ZNF768Q9H5H4 540 aaKnown RBP13.86□□□□□ -0.19
CBWD3-217ENST00000621474 GPAMQ9HCL2 828 aa13.86□□□□□ -0.19
CBWD3-217ENST00000621474 LOXL2Q9Y4K0 774 aa13.86□□□□□ -0.19
CBWD3-217ENST00000621474 ACACAQ13085 2346 aa13.85□□□□□ -0.19
CBWD3-217ENST00000621474 ACACBO00763 2458 aa13.85□□□□□ -0.19
CBWD3-217ENST00000621474 CFAP47Q6ZTR5 3102 aa13.85□□□□□ -0.19
CBWD3-217ENST00000621474 AHCTF1Q8WYP5 2266 aa13.85□□□□□ -0.19
CBWD3-217ENST00000621474 A0A1W2PPV9 198 aa13.85□□□□□ -0.19
CBWD3-217ENST00000621474 TLCD2A6NGC4 264 aa13.85□□□□□ -0.19
CBWD3-217ENST00000621474 C1QTNF9BB2RNN3 333 aa13.85□□□□□ -0.19
CBWD3-217ENST00000621474 TMX2-CTNND1H3BSU7 103 aa13.85□□□□□ -0.19
CBWD3-217ENST00000621474 PLD2O14939 933 aa13.85□□□□□ -0.19
CBWD3-217ENST00000621474 PRICKLE3O43900 615 aaPredicted RBP13.85□□□□□ -0.19
CBWD3-217ENST00000621474 CATP04040 527 aaKnown RBP13.85□□□□□ -0.19
CBWD3-217ENST00000621474 ALDOAP04075 364 aaKnown RBP13.85□□□□□ -0.19
CBWD3-217ENST00000621474 C1QTNF9P0C862 333 aa13.85□□□□□ -0.19
CBWD3-217ENST00000621474 SLC35E2BP0CK96 405 aa13.85□□□□□ -0.19
CBWD3-217ENST00000621474 CCL4P13236 92 aa13.85□□□□□ -0.19
CBWD3-217ENST00000621474 ETV5P41161 510 aa13.85□□□□□ -0.19
CBWD3-217ENST00000621474 ILF2Q12905 390 aaKnown RBP13.85□□□□□ -0.19
CBWD3-217ENST00000621474 EIF3IQ13347 325 aaKnown RBP13.85□□□□□ -0.19
CBWD3-217ENST00000621474 FASTKQ14296 549 aaKnown RBP13.85□□□□□ -0.19
CBWD3-217ENST00000621474 USP10Q14694 798 aaKnown RBP13.85□□□□□ -0.19
CBWD3-217ENST00000621474 ZXDCQ2QGD7 858 aaPredicted RBP13.85□□□□□ -0.19
CBWD3-217ENST00000621474 FBXO38Q6PIJ6 1188 aa13.85□□□□□ -0.19
CBWD3-217ENST00000621474 SBSNQ6UWP8 590 aa13.85□□□□□ -0.19
CBWD3-217ENST00000621474 UBE2R2Q712K3 238 aaPredicted RBP13.85□□□□□ -0.19
CBWD3-217ENST00000621474 MYO1HQ8N1T3 1032 aa13.85□□□□□ -0.19
CBWD3-217ENST00000621474 C2orf73Q8N5S3 287 aaPredicted RBP13.85□□□□□ -0.19
CBWD3-217ENST00000621474 OR9A1PQ8NGU1 263 aa13.85□□□□□ -0.19
CBWD3-217ENST00000621474 OR2L8Q8NGY9 312 aa13.85□□□□□ -0.19
CBWD3-217ENST00000621474 WDR36Q8NI36 951 aaKnown RBP13.85□□□□□ -0.19
CBWD3-217ENST00000621474 HMGCLL1Q8TB92 370 aa13.85□□□□□ -0.19
CBWD3-217ENST00000621474 DCAKDQ8WVC6 231 aa13.85□□□□□ -0.19
CBWD3-217ENST00000621474 KLHL6Q8WZ60 621 aa13.85□□□□□ -0.19
CBWD3-217ENST00000621474 PMEPA1Q969W9 287 aa13.85□□□□□ -0.19
CBWD3-217ENST00000621474 UBXN10Q96LJ8 280 aa13.85□□□□□ -0.19
CBWD3-217ENST00000621474 PKP4Q99569 1192 aa13.85□□□□□ -0.19
CBWD3-217ENST00000621474 CMKLR1Q99788 373 aa13.85□□□□□ -0.19
CBWD3-217ENST00000621474 SLC12A9Q9BXP2 914 aa13.85□□□□□ -0.19
CBWD3-217ENST00000621474 PITPNM3Q9BZ71 974 aa13.85□□□□□ -0.19
CBWD3-217ENST00000621474 STRADBQ9C0K7 418 aa13.85□□□□□ -0.19
CBWD3-217ENST00000621474 POLR1BQ9H9Y6 1135 aa13.85□□□□□ -0.19
CBWD3-217ENST00000621474 OCIAD1Q9NX40 245 aa13.85□□□□□ -0.19
CBWD3-217ENST00000621474 SIDT1Q9NXL6 827 aaKnown RBP13.85□□□□□ -0.19
CBWD3-217ENST00000621474 ACTR10Q9NZ32 417 aa13.85□□□□□ -0.19
CBWD3-217ENST00000621474 PDE10AQ9Y233 779 aa13.85□□□□□ -0.19
CBWD3-217ENST00000621474 PCDHGA8Q9Y5G5 932 aa13.85□□□□□ -0.19
CBWD3-217ENST00000621474 SDK2Q58EX2 2172 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms