RNA–Protein interactions for RNA: ENST00000618534.4

NEK3-208, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene NEK3, Length 2,414 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-208ENST00000618534 USP39Q53GS9 565 aaKnown RBP19.94■□□□□ 0.78
NEK3-208ENST00000618534 ZC3H12BQ5HYM0 836 aaKnown RBP19.94■□□□□ 0.78
NEK3-208ENST00000618534 RNF219Q5W0B1 726 aaPredicted RBP19.94■□□□□ 0.78
NEK3-208ENST00000618534 LAIR1Q6GTX8 287 aa19.94■□□□□ 0.78
NEK3-208ENST00000618534 TRIM46Q7Z4K8 759 aa19.94■□□□□ 0.78
NEK3-208ENST00000618534 CYP4Z1Q86W10 505 aa19.94■□□□□ 0.78
NEK3-208ENST00000618534 SERPINA9Q86WD7 417 aa19.94■□□□□ 0.78
NEK3-208ENST00000618534 PIK3C3Q8NEB9 887 aa19.94■□□□□ 0.78
NEK3-208ENST00000618534 RORBQ92753 470 aa19.94■□□□□ 0.78
NEK3-208ENST00000618534 MTFMTQ96DP5 389 aaKnown RBP19.94■□□□□ 0.78
NEK3-208ENST00000618534 VMP1Q96GC9 406 aa19.94■□□□□ 0.78
NEK3-208ENST00000618534 PYURFQ96I23 114 aa19.94■□□□□ 0.78
NEK3-208ENST00000618534 SPATA17Q96L03 361 aa19.94■□□□□ 0.78
NEK3-208ENST00000618534 FAM193BQ96PV7 902 aaPredicted RBP19.94■□□□□ 0.78
NEK3-208ENST00000618534 GPR63Q9BZJ6 419 aa19.94■□□□□ 0.78
NEK3-208ENST00000618534 NACA2Q9H009 215 aa19.94■□□□□ 0.78
NEK3-208ENST00000618534 DNMT3LQ9UJW3 386 aa19.94■□□□□ 0.78
NEK3-208ENST00000618534 PCDHB9Q9Y5E1 797 aa19.94■□□□□ 0.78
NEK3-208ENST00000618534 PCDHGB1Q9Y5G3 927 aa19.94■□□□□ 0.78
NEK3-208ENST00000618534 PRSS21Q9Y6M0 314 aa19.94■□□□□ 0.78
NEK3-208ENST00000618534 FRMPD3Q5JV73 1810 aa19.94■□□□□ 0.78
NEK3-208ENST00000618534 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP19.94■□□□□ 0.78
NEK3-208ENST00000618534 OR6C75A6NL08 312 aa19.94■□□□□ 0.78
NEK3-208ENST00000618534 LOC730098B7Z3J9 87 aa19.94■□□□□ 0.78
NEK3-208ENST00000618534 MANBAO00462 879 aa19.94■□□□□ 0.78
NEK3-208ENST00000618534 BCKDHAP12694 445 aa19.94■□□□□ 0.78
NEK3-208ENST00000618534 CD6P30203 668 aa19.94■□□□□ 0.78
NEK3-208ENST00000618534 MTA1Q13330 715 aa19.94■□□□□ 0.78
NEK3-208ENST00000618534 ZNF177Q13360 481 aaPredicted RBP19.94■□□□□ 0.78
NEK3-208ENST00000618534 SIM2Q14190 667 aaPredicted RBP19.94■□□□□ 0.78
NEK3-208ENST00000618534 ACOX1Q15067 660 aa19.94■□□□□ 0.78
NEK3-208ENST00000618534 SMU1Q2TAY7 513 aa19.94■□□□□ 0.78
NEK3-208ENST00000618534 NCEH1Q6PIU2 408 aa19.94■□□□□ 0.78
NEK3-208ENST00000618534 CLDN19Q8N6F1 224 aa19.94■□□□□ 0.78
NEK3-208ENST00000618534 SOCS4Q8WXH5 440 aa19.94■□□□□ 0.78
NEK3-208ENST00000618534 LINC01599Q8WXQ3 324 aa19.94■□□□□ 0.78
NEK3-208ENST00000618534 ITPKCQ96DU7 683 aa19.94■□□□□ 0.78
NEK3-208ENST00000618534 INPP5KQ9BT40 448 aa19.94■□□□□ 0.78
NEK3-208ENST00000618534 XRN2Q9H0D6 950 aaKnown RBP eCLIP19.94■□□□□ 0.781e-5■■■□□ 18
NEK3-208ENST00000618534 RIBC2Q9H4K1 309 aa19.94■□□□□ 0.78
NEK3-208ENST00000618534 SPC25Q9HBM1 224 aa19.94■□□□□ 0.78
NEK3-208ENST00000618534 SERHLQ9NQF3 203 aa19.94■□□□□ 0.78
NEK3-208ENST00000618534 GOLGA8CPA6NN73 597 aa19.93■□□□□ 0.78
NEK3-208ENST00000618534 H0Y626 953 aa19.93■□□□□ 0.78
NEK3-208ENST00000618534 COQ9O75208 318 aa19.93■□□□□ 0.78
NEK3-208ENST00000618534 RECQL5O94762 991 aaPredicted RBP19.93■□□□□ 0.78
NEK3-208ENST00000618534 TRIM16O95361 564 aa19.93■□□□□ 0.78
NEK3-208ENST00000618534 ALDH2P05091 517 aa19.93■□□□□ 0.78
NEK3-208ENST00000618534 ALPIP09923 528 aa19.93■□□□□ 0.78
NEK3-208ENST00000618534 CYBAP13498 195 aa19.93■□□□□ 0.78
NEK3-208ENST00000618534 ATP5C1P36542 298 aaKnown RBP19.93■□□□□ 0.78
NEK3-208ENST00000618534 IL1RL1Q01638 556 aa19.93■□□□□ 0.78
NEK3-208ENST00000618534 CPZQ66K79 652 aa19.93■□□□□ 0.78
NEK3-208ENST00000618534 ANKRD46Q86W74 232 aa19.93■□□□□ 0.78
NEK3-208ENST00000618534 GLMNQ92990 594 aa19.93■□□□□ 0.78
NEK3-208ENST00000618534 ERLEC1Q96DZ1 483 aa19.93■□□□□ 0.78
NEK3-208ENST00000618534 ALOXE3Q9BYJ1 711 aa19.93■□□□□ 0.78
NEK3-208ENST00000618534 TNKS2Q9H2K2 1166 aa19.93■□□□□ 0.78
NEK3-208ENST00000618534 ATP13A3Q9H7F0 1226 aa19.93■□□□□ 0.78
NEK3-208ENST00000618534 PCDHGA10Q9Y5H3 936 aa19.93■□□□□ 0.78
NEK3-208ENST00000618534 M0R3G1 203 aa19.93■□□□□ 0.78
NEK3-208ENST00000618534 SLC22A1O15245 554 aa19.93■□□□□ 0.78
NEK3-208ENST00000618534 NADKO95544 446 aaPredicted RBP19.93■□□□□ 0.78
NEK3-208ENST00000618534 KLKB1P03952 638 aa19.93■□□□□ 0.78
NEK3-208ENST00000618534 RGS4P49798 205 aa19.93■□□□□ 0.78
NEK3-208ENST00000618534 VBP1P61758 197 aa19.93■□□□□ 0.78
NEK3-208ENST00000618534 CARD16Q5EG05 197 aa19.93■□□□□ 0.78
NEK3-208ENST00000618534 SHQ1Q6PI26 577 aaKnown RBP19.93■□□□□ 0.78
NEK3-208ENST00000618534 MBOAT1Q6ZNC8 495 aa19.93■□□□□ 0.78
NEK3-208ENST00000618534 ZDHHC21Q8IVQ6 265 aa19.93■□□□□ 0.78
NEK3-208ENST00000618534 MFSD4AQ8N468 514 aa19.93■□□□□ 0.78
NEK3-208ENST00000618534 RHNO1Q9BSD3 238 aa19.93■□□□□ 0.78
NEK3-208ENST00000618534 PCDH12Q9NPG4 1184 aa19.93■□□□□ 0.78
NEK3-208ENST00000618534 ATAD3AQ9NVI7 634 aa19.93■□□□□ 0.78
NEK3-208ENST00000618534 ASIC5Q9NY37 505 aa19.93■□□□□ 0.78
NEK3-208ENST00000618534 AP3M1Q9Y2T2 418 aa19.93■□□□□ 0.78
NEK3-208ENST00000618534 SLC38A8A6NNN8 435 aa19.92■□□□□ 0.78
NEK3-208ENST00000618534 M0QX08 132 aa19.92■□□□□ 0.78
NEK3-208ENST00000618534 SLC25A14O95258 325 aaPredicted RBP19.92■□□□□ 0.78
NEK3-208ENST00000618534 PRAMEF1O95521 474 aa19.92■□□□□ 0.78
NEK3-208ENST00000618534 ZNF7P17097 686 aaPredicted RBP19.92■□□□□ 0.78
NEK3-208ENST00000618534 ACVR2AP27037 513 aa19.92■□□□□ 0.78
NEK3-208ENST00000618534 EIF2B2P49770 351 aaKnown RBP19.92■□□□□ 0.78
NEK3-208ENST00000618534 FKBP1BP68106 108 aa19.92■□□□□ 0.78
NEK3-208ENST00000618534 NPTX1Q15818 432 aa19.92■□□□□ 0.78
NEK3-208ENST00000618534 TRIM71Q2Q1W2 868 aaKnown RBP19.92■□□□□ 0.78
NEK3-208ENST00000618534 TMEM236Q5W0B7 351 aa19.92■□□□□ 0.78
NEK3-208ENST00000618534 CCDC81Q6ZN84 652 aa19.92■□□□□ 0.78
NEK3-208ENST00000618534 CEP68Q76N32 757 aa19.92■□□□□ 0.78
NEK3-208ENST00000618534 C2orf69Q8N8R5 385 aa19.92■□□□□ 0.78
NEK3-208ENST00000618534 S100ZQ8WXG8 99 aa19.92■□□□□ 0.78
NEK3-208ENST00000618534 ULK4Q96C45 1275 aa19.92■□□□□ 0.78
NEK3-208ENST00000618534 YIPF6Q96EC8 236 aa19.92■□□□□ 0.78
NEK3-208ENST00000618534 DLGAP4Q9Y2H0 992 aa19.92■□□□□ 0.78
NEK3-208ENST00000618534 TRIM17Q9Y577 477 aa19.92■□□□□ 0.78
NEK3-208ENST00000618534 PMF1-BGLAPU3KQ54 211 aa19.92■□□□□ 0.78
NEK3-208ENST00000618534 TRIM43BA6NCK2 446 aa19.92■□□□□ 0.78
NEK3-208ENST00000618534 GLTPD2A6NH11 291 aa19.92■□□□□ 0.78
NEK3-208ENST00000618534 ERN1O75460 977 aaKnown RBP19.92■□□□□ 0.78
NEK3-208ENST00000618534 WDR47O94967 919 aa19.92■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms