RNA–Protein interactions for RNA: ENST00000616247.4

LMO3-235, Transcript of LIM domain only 3, humanhuman

TSL 5 BASIC

Gene LMO3, Length 3,227 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-235ENST00000616247 CIR1Q86X95 450 aaPredicted RBP6.54□□□□□ -1.36
LMO3-235ENST00000616247 LIX1Q8N485 282 aa6.54□□□□□ -1.36
LMO3-235ENST00000616247 NATD1Q8N6N6 113 aa6.54□□□□□ -1.36
LMO3-235ENST00000616247 OR4L1Q8NH43 312 aa6.54□□□□□ -1.36
LMO3-235ENST00000616247 PIK3R3Q92569 461 aa6.54□□□□□ -1.36
LMO3-235ENST00000616247 PSMG2Q969U7 264 aa6.54□□□□□ -1.36
LMO3-235ENST00000616247 NTAN1Q96AB6 310 aa6.54□□□□□ -1.36
LMO3-235ENST00000616247 MTERF3Q96E29 417 aa6.54□□□□□ -1.36
LMO3-235ENST00000616247 YIPF6Q96EC8 236 aa6.54□□□□□ -1.36
LMO3-235ENST00000616247 SENP8Q96LD8 212 aa6.54□□□□□ -1.36
LMO3-235ENST00000616247 ZNF599Q96NL3 588 aa6.54□□□□□ -1.36
LMO3-235ENST00000616247 RDH12Q96NR8 316 aa6.54□□□□□ -1.36
LMO3-235ENST00000616247 SLC9A7Q96T83 725 aa6.54□□□□□ -1.36
LMO3-235ENST00000616247 GMLQ99445 158 aa6.54□□□□□ -1.36
LMO3-235ENST00000616247 SMOQ99835 787 aa6.54□□□□□ -1.36
LMO3-235ENST00000616247 CCNB1IP1Q9NPC3 277 aa6.54□□□□□ -1.36
LMO3-235ENST00000616247 GPR83Q9NYM4 423 aa6.54□□□□□ -1.36
LMO3-235ENST00000616247 ZNF639Q9UID6 485 aa6.54□□□□□ -1.36
LMO3-235ENST00000616247 ZNF490Q9ULM2 529 aaPredicted RBP6.54□□□□□ -1.36
LMO3-235ENST00000616247 ABCG2Q9UNQ0 655 aa6.54□□□□□ -1.36
LMO3-235ENST00000616247 PEX16Q9Y5Y5 336 aa6.54□□□□□ -1.36
LMO3-235ENST00000616247 SIPA1L1O43166 1804 aa6.53□□□□□ -1.36
LMO3-235ENST00000616247 RBBP6Q7Z6E9 1792 aaKnown RBP6.53□□□□□ -1.36
LMO3-235ENST00000616247 C19orf81C9J6K1 198 aa6.53□□□□□ -1.36
LMO3-235ENST00000616247 NBNO60934 754 aa6.53□□□□□ -1.36
LMO3-235ENST00000616247 VPS26AO75436 327 aa6.53□□□□□ -1.36
LMO3-235ENST00000616247 SEMA3DO95025 777 aa6.53□□□□□ -1.36
LMO3-235ENST00000616247 ALX3O95076 343 aa6.53□□□□□ -1.36
LMO3-235ENST00000616247 SNX4O95219 450 aa6.53□□□□□ -1.36
LMO3-235ENST00000616247 PAPSS2O95340 614 aaPredicted RBP6.53□□□□□ -1.36
LMO3-235ENST00000616247 ITGB1P05556 798 aa6.53□□□□□ -1.36
LMO3-235ENST00000616247 UQCRC1P31930 480 aa6.53□□□□□ -1.36
LMO3-235ENST00000616247 S100A3P33764 101 aa6.53□□□□□ -1.36
LMO3-235ENST00000616247 HTR3AP46098 478 aa6.53□□□□□ -1.36
LMO3-235ENST00000616247 CDKN1CP49918 316 aaPredicted RBP6.53□□□□□ -1.36
LMO3-235ENST00000616247 CLCNKBP51801 687 aa6.53□□□□□ -1.36
LMO3-235ENST00000616247 ERVPABLB-1P60509 514 aa6.53□□□□□ -1.36
LMO3-235ENST00000616247 ZNF45Q02386 682 aa6.53□□□□□ -1.36
LMO3-235ENST00000616247 SEMA3AQ14563 771 aa6.53□□□□□ -1.36
LMO3-235ENST00000616247 CPSF6Q16630 551 aaKnown RBP eCLIP6.53□□□□□ -1.36
LMO3-235ENST00000616247 INTS6LQ5JSJ4 861 aaKnown RBP6.53□□□□□ -1.36
LMO3-235ENST00000616247 ZNF484Q5JVG2 852 aa6.53□□□□□ -1.36
LMO3-235ENST00000616247 PDZK1Q5T2W1 519 aa6.53□□□□□ -1.36
LMO3-235ENST00000616247 SYT6Q5T7P8 510 aaPredicted RBP6.53□□□□□ -1.36
LMO3-235ENST00000616247 SDHAF4Q5VUM1 108 aa6.53□□□□□ -1.36
LMO3-235ENST00000616247 SIGIRRQ6IA17 410 aa6.53□□□□□ -1.36
LMO3-235ENST00000616247 PDE12Q6L8Q7 609 aaKnown RBP6.53□□□□□ -1.36
LMO3-235ENST00000616247 TIGD7Q6NT04 549 aaPredicted RBP6.53□□□□□ -1.36
LMO3-235ENST00000616247 LETMD1Q6P1Q0 360 aa6.53□□□□□ -1.36
LMO3-235ENST00000616247 DOK6Q6PKX4 331 aa6.53□□□□□ -1.36
LMO3-235ENST00000616247 PAMR1Q6UXH9 720 aa6.53□□□□□ -1.36
LMO3-235ENST00000616247 Q6ZSR9 355 aa6.53□□□□□ -1.36
LMO3-235ENST00000616247 ZNF605Q86T29 641 aa6.53□□□□□ -1.36
LMO3-235ENST00000616247 RASAL3Q86YV0 1011 aa6.53□□□□□ -1.36
LMO3-235ENST00000616247 SLC44A2Q8IWA5 706 aaPredicted RBP6.53□□□□□ -1.36
LMO3-235ENST00000616247 IL17RDQ8NFM7 739 aa6.53□□□□□ -1.36
LMO3-235ENST00000616247 OR4K2Q8NGD2 314 aa6.53□□□□□ -1.36
LMO3-235ENST00000616247 OR6F1Q8NGZ6 308 aa6.53□□□□□ -1.36
LMO3-235ENST00000616247 EEF1AKMT1Q8WVE0 214 aa6.53□□□□□ -1.36
LMO3-235ENST00000616247 PCNPQ8WW12 178 aaKnown RBP6.53□□□□□ -1.36
LMO3-235ENST00000616247 DNASE1L2Q92874 299 aa6.53□□□□□ -1.36
LMO3-235ENST00000616247 CDCA5Q96FF9 252 aa6.53□□□□□ -1.36
LMO3-235ENST00000616247 BTN2A3PQ96KV6 586 aa6.53□□□□□ -1.36
LMO3-235ENST00000616247 TEPSINQ96N21 525 aa6.53□□□□□ -1.36
LMO3-235ENST00000616247 TMLHEQ9NVH6 421 aa6.53□□□□□ -1.36
LMO3-235ENST00000616247 ZIM2Q9NZV7 527 aa6.53□□□□□ -1.36
LMO3-235ENST00000616247 GJD2Q9UKL4 321 aa6.53□□□□□ -1.36
LMO3-235ENST00000616247 DUSP12Q9UNI6 340 aa6.53□□□□□ -1.36
LMO3-235ENST00000616247 KIAA1217Q5T5P2 1943 aa6.53□□□□□ -1.36
LMO3-235ENST00000616247 H3BM21 787 aa6.53□□□□□ -1.36
LMO3-235ENST00000616247 GPR182O15218 404 aa6.53□□□□□ -1.36
LMO3-235ENST00000616247 TEX28O15482 410 aa6.53□□□□□ -1.36
LMO3-235ENST00000616247 KIAA0513O60268 411 aa6.53□□□□□ -1.36
LMO3-235ENST00000616247 KERAO60938 352 aa6.53□□□□□ -1.36
LMO3-235ENST00000616247 SCELO95171 688 aa6.53□□□□□ -1.36
LMO3-235ENST00000616247 PGRP06401 933 aa6.53□□□□□ -1.36
LMO3-235ENST00000616247 YES1P07947 543 aa6.53□□□□□ -1.36
LMO3-235ENST00000616247 SLC10A3P09131 477 aa6.53□□□□□ -1.36
LMO3-235ENST00000616247 HAPLN1P10915 354 aaPredicted RBP6.53□□□□□ -1.36
LMO3-235ENST00000616247 SSTR4P31391 388 aa6.53□□□□□ -1.36
LMO3-235ENST00000616247 CYP2C18P33260 490 aa6.53□□□□□ -1.36
LMO3-235ENST00000616247 SCNN1AP37088 669 aa6.53□□□□□ -1.36
LMO3-235ENST00000616247 HNF4AP41235 474 aa6.53□□□□□ -1.36
LMO3-235ENST00000616247 PPP3CCP48454 512 aa6.53□□□□□ -1.36
LMO3-235ENST00000616247 DAPP51397 102 aa6.53□□□□□ -1.36
LMO3-235ENST00000616247 IL2P60568 153 aa6.53□□□□□ -1.36
LMO3-235ENST00000616247 GPLD1P80108 840 aa6.53□□□□□ -1.36
LMO3-235ENST00000616247 CDC20Q12834 499 aa6.53□□□□□ -1.36
LMO3-235ENST00000616247 IL18R1Q13478 541 aa6.53□□□□□ -1.36
LMO3-235ENST00000616247 ABRAXAS2Q15018 415 aa6.53□□□□□ -1.36
LMO3-235ENST00000616247 TSTQ16762 297 aaKnown RBP6.53□□□□□ -1.36
LMO3-235ENST00000616247 DCAF4L1Q3SXM0 396 aa6.53□□□□□ -1.36
LMO3-235ENST00000616247 OR2T5Q6IEZ7 315 aa6.53□□□□□ -1.36
LMO3-235ENST00000616247 FAM131AQ6UXB0 335 aa6.53□□□□□ -1.36
LMO3-235ENST00000616247 TMPRSS11AQ6ZMR5 421 aa6.53□□□□□ -1.36
LMO3-235ENST00000616247 PAQR9Q6ZVX9 377 aa6.53□□□□□ -1.36
LMO3-235ENST00000616247 AMIGO1Q86WK6 493 aa6.53□□□□□ -1.36
LMO3-235ENST00000616247 CCDC28AQ8IWP9 274 aa6.53□□□□□ -1.36
LMO3-235ENST00000616247 ARHGAP12Q8IWW6 846 aa6.53□□□□□ -1.36
LMO3-235ENST00000616247 OR4F6Q8NGB9 312 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms