RNA–Protein interactions for RNA: ENST00000615606.4

CLTCL1-208, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,994 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-208ENST00000615606 CNPPD1Q9BV87 410 aa9.24□□□□□ -0.93
CLTCL1-208ENST00000615606 MARCH5Q9NX47 278 aa9.24□□□□□ -0.93
CLTCL1-208ENST00000615606 NDUFA13Q9P0J0 144 aa9.24□□□□□ -0.93
CLTCL1-208ENST00000615606 PAIP2BQ9ULR5 123 aaKnown RBP9.24□□□□□ -0.93
CLTCL1-208ENST00000615606 SLC22A14Q9Y267 594 aa9.24□□□□□ -0.93
CLTCL1-208ENST00000615606 LRRC14BA6NHZ5 514 aa9.24□□□□□ -0.93
CLTCL1-208ENST00000615606 HIDE1A8MVS5 230 aa9.24□□□□□ -0.93
CLTCL1-208ENST00000615606 CDC7O00311 574 aa9.24□□□□□ -0.93
CLTCL1-208ENST00000615606 ADAM12O43184 909 aa9.24□□□□□ -0.93
CLTCL1-208ENST00000615606 GLDCP23378 1020 aa9.24□□□□□ -0.93
CLTCL1-208ENST00000615606 TPP2P29144 1249 aaPredicted RBP9.24□□□□□ -0.93
CLTCL1-208ENST00000615606 GSSP48637 474 aa9.24□□□□□ -0.93
CLTCL1-208ENST00000615606 ERVK-8P63133 956 aa9.24□□□□□ -0.93
CLTCL1-208ENST00000615606 ZNF252P-AS1Q0IIN9 211 aa9.24□□□□□ -0.93
CLTCL1-208ENST00000615606 EMC10Q5UCC4 262 aa9.24□□□□□ -0.93
CLTCL1-208ENST00000615606 KHDRBS2Q5VWX1 349 aaKnown RBP9.24□□□□□ -0.93
CLTCL1-208ENST00000615606 LRRC74BQ6ZQY2 392 aa9.24□□□□□ -0.93
CLTCL1-208ENST00000615606 TRIM74Q86UV6 250 aa9.24□□□□□ -0.93
CLTCL1-208ENST00000615606 CAND1Q86VP6 1230 aaKnown RBP9.24□□□□□ -0.93
CLTCL1-208ENST00000615606 RELL1Q8IUW5 271 aa9.24□□□□□ -0.93
CLTCL1-208ENST00000615606 GPR65Q8IYL9 337 aa9.24□□□□□ -0.93
CLTCL1-208ENST00000615606 NPWQ8N729 165 aa9.24□□□□□ -0.93
CLTCL1-208ENST00000615606 FBXO15Q8NCQ5 510 aaPredicted RBP9.24□□□□□ -0.93
CLTCL1-208ENST00000615606 TRPV3Q8NET8 790 aa9.24□□□□□ -0.93
CLTCL1-208ENST00000615606 RASSF5Q8WWW0 418 aa9.24□□□□□ -0.93
CLTCL1-208ENST00000615606 PIGKQ92643 395 aa9.24□□□□□ -0.93
CLTCL1-208ENST00000615606 SEMA6AQ9H2E6 1030 aa9.24□□□□□ -0.93
CLTCL1-208ENST00000615606 TMEM27Q9HBJ8 222 aa9.24□□□□□ -0.93
CLTCL1-208ENST00000615606 C3orf18Q9UK00 162 aa9.24□□□□□ -0.93
CLTCL1-208ENST00000615606 DHRS7Q9Y394 339 aa9.24□□□□□ -0.93
CLTCL1-208ENST00000615606 DRGXA6NNA5 263 aa9.23□□□□□ -0.93
CLTCL1-208ENST00000615606 WASH4PA8MWX3 477 aa9.23□□□□□ -0.93
CLTCL1-208ENST00000615606 ABLIM1O14639 778 aa9.23□□□□□ -0.93
CLTCL1-208ENST00000615606 OR10H3O60404 316 aa9.23□□□□□ -0.93
CLTCL1-208ENST00000615606 KRT33AO76009 404 aa9.23□□□□□ -0.93
CLTCL1-208ENST00000615606 SEMA4FO95754 770 aa9.23□□□□□ -0.93
CLTCL1-208ENST00000615606 CST1P01037 141 aa9.23□□□□□ -0.93
CLTCL1-208ENST00000615606 C6P13671 934 aa9.23□□□□□ -0.93
CLTCL1-208ENST00000615606 ARSAP15289 507 aa9.23□□□□□ -0.93
CLTCL1-208ENST00000615606 ATF6P18850 670 aa9.23□□□□□ -0.93
CLTCL1-208ENST00000615606 ACRV1P26436 265 aa9.23□□□□□ -0.93
CLTCL1-208ENST00000615606 ERVFC1P60507 584 aa9.23□□□□□ -0.93
CLTCL1-208ENST00000615606 PTPRCAPQ14761 206 aa9.23□□□□□ -0.93
CLTCL1-208ENST00000615606 TMEM240Q5SV17 173 aa9.23□□□□□ -0.93
CLTCL1-208ENST00000615606 CDC73Q6P1J9 531 aa9.23□□□□□ -0.93
CLTCL1-208ENST00000615606 CLNKQ7Z7G1 428 aa9.23□□□□□ -0.93
CLTCL1-208ENST00000615606 ARMC8Q8IUR7 673 aa9.23□□□□□ -0.93
CLTCL1-208ENST00000615606 PRSS58Q8IYP2 241 aa9.23□□□□□ -0.93
CLTCL1-208ENST00000615606 VN1R2Q8NFZ6 395 aa9.23□□□□□ -0.93
CLTCL1-208ENST00000615606 SPPL3Q8TCT6 385 aa9.23□□□□□ -0.93
CLTCL1-208ENST00000615606 SLC5A11Q8WWX8 675 aa9.23□□□□□ -0.93
CLTCL1-208ENST00000615606 DNASE1L2Q92874 299 aa9.23□□□□□ -0.93
CLTCL1-208ENST00000615606 LMAN1LQ9HAT1 526 aa9.23□□□□□ -0.93
CLTCL1-208ENST00000615606 SAMHD1Q9Y3Z3 626 aaKnown RBP9.23□□□□□ -0.93
CLTCL1-208ENST00000615606 PRKAB1Q9Y478 270 aa9.23□□□□□ -0.93
CLTCL1-208ENST00000615606 MYH9P35579 1960 aaKnown RBP9.23□□□□□ -0.93
CLTCL1-208ENST00000615606 IGLON5A6NGN9 336 aa9.23□□□□□ -0.93
CLTCL1-208ENST00000615606 SOBPA7XYQ1 873 aa9.23□□□□□ -0.93
CLTCL1-208ENST00000615606 MID1O15344 667 aa9.23□□□□□ -0.93
CLTCL1-208ENST00000615606 SLC16A5O15375 505 aa9.23□□□□□ -0.93
CLTCL1-208ENST00000615606 KRT8P05787 483 aa9.23□□□□□ -0.93
CLTCL1-208ENST00000615606 MPC1LP0DKB6 136 aa9.23□□□□□ -0.93
CLTCL1-208ENST00000615606 ADRB3P13945 408 aa9.23□□□□□ -0.93
CLTCL1-208ENST00000615606 RPP38P78345 283 aaKnown RBP9.23□□□□□ -0.93
CLTCL1-208ENST00000615606 HSPB3Q12988 150 aa9.23□□□□□ -0.93
CLTCL1-208ENST00000615606 PUS10Q3MIT2 529 aaKnown RBP9.23□□□□□ -0.93
CLTCL1-208ENST00000615606 PRRT3Q5FWE3 981 aa9.23□□□□□ -0.93
CLTCL1-208ENST00000615606 VWA5B1Q5TIE3 1220 aa9.23□□□□□ -0.93
CLTCL1-208ENST00000615606 SPESP1Q6UW49 350 aa9.23□□□□□ -0.93
CLTCL1-208ENST00000615606 SLC36A4Q6YBV0 504 aa9.23□□□□□ -0.93
CLTCL1-208ENST00000615606 PLEKHM3Q6ZWE6 761 aa9.23□□□□□ -0.93
CLTCL1-208ENST00000615606 ULK2Q8IYT8 1036 aa9.23□□□□□ -0.93
CLTCL1-208ENST00000615606 MRPL38Q96DV4 380 aaKnown RBP9.23□□□□□ -0.93
CLTCL1-208ENST00000615606 TRIM39Q9HCM9 518 aa9.23□□□□□ -0.93
CLTCL1-208ENST00000615606 PAK6Q9NQU5 681 aaPredicted RBP9.23□□□□□ -0.93
CLTCL1-208ENST00000615606 ZNF358Q9NW07 568 aa9.23□□□□□ -0.93
CLTCL1-208ENST00000615606 COL5A3P25940 1745 aaPredicted RBP9.23□□□□□ -0.93
CLTCL1-208ENST00000615606 WFS1O76024 890 aa9.23□□□□□ -0.93
CLTCL1-208ENST00000615606 KLK3P07288 261 aaPredicted RBP9.23□□□□□ -0.93
CLTCL1-208ENST00000615606 LAMP2P13473 410 aa9.23□□□□□ -0.93
CLTCL1-208ENST00000615606 HMGCLP35914 325 aa9.23□□□□□ -0.93
CLTCL1-208ENST00000615606 PREPP48147 710 aa9.23□□□□□ -0.93
CLTCL1-208ENST00000615606 LEPRP48357 1165 aaKnown RBP9.23□□□□□ -0.93
CLTCL1-208ENST00000615606 BLVRAP53004 296 aa9.23□□□□□ -0.93
CLTCL1-208ENST00000615606 SLC18A1P54219 525 aa9.23□□□□□ -0.93
CLTCL1-208ENST00000615606 TAF13Q15543 124 aa9.23□□□□□ -0.93
CLTCL1-208ENST00000615606 LHX8Q68G74 356 aa9.23□□□□□ -0.93
CLTCL1-208ENST00000615606 ADCY4Q8NFM4 1077 aa9.23□□□□□ -0.93
CLTCL1-208ENST00000615606 NCSTNQ92542 709 aa9.23□□□□□ -0.93
CLTCL1-208ENST00000615606 TCEAL4Q96EI5 215 aa9.23□□□□□ -0.93
CLTCL1-208ENST00000615606 SLC47A1Q96FL8 570 aa9.23□□□□□ -0.93
CLTCL1-208ENST00000615606 VPS35Q96QK1 796 aa9.23□□□□□ -0.93
CLTCL1-208ENST00000615606 GAL3ST4Q96RP7 486 aa9.23□□□□□ -0.93
CLTCL1-208ENST00000615606 ZNF282Q9UDV7 671 aaPredicted RBP9.23□□□□□ -0.93
CLTCL1-208ENST00000615606 PACSIN3Q9UKS6 424 aa9.23□□□□□ -0.93
CLTCL1-208ENST00000615606 TBX21Q9UL17 535 aa9.23□□□□□ -0.93
CLTCL1-208ENST00000615606 MAP4K5Q9Y4K4 846 aa9.23□□□□□ -0.93
CLTCL1-208ENST00000615606 PDE4DIPQ5VU43 2346 aa9.23□□□□□ -0.93
CLTCL1-208ENST00000615606 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.23□□□□□ -0.93
CLTCL1-208ENST00000615606 MAGEB17A8MXT2 336 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms