RNA–Protein interactions for RNA: ENST00000613122.4

CTDP1-208, Transcript of CTD phosphatase subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CTDP1, Length 5,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-208ENST00000613122 SLC30A8Q8IWU4 369 aa19.79■□□□□ 0.76
CTDP1-208ENST00000613122 GPR65Q8IYL9 337 aa19.79■□□□□ 0.76
CTDP1-208ENST00000613122 ZNF527Q8NB42 609 aa19.79■□□□□ 0.76
CTDP1-208ENST00000613122 SLC13A3Q8WWT9 602 aa19.79■□□□□ 0.76
CTDP1-208ENST00000613122 PLEKHG4BQ96PX9 1271 aa19.79■□□□□ 0.76
CTDP1-208ENST00000613122 GPATCH1Q9BRR8 931 aaKnown RBP19.79■□□□□ 0.76
CTDP1-208ENST00000613122 ABCB10Q9NRK6 738 aa19.79■□□□□ 0.76
CTDP1-208ENST00000613122 MYOM1P52179 1685 aa19.79■□□□□ 0.76
CTDP1-208ENST00000613122 CLDN7O95471 211 aa19.79■□□□□ 0.76
CTDP1-208ENST00000613122 CYB5AP00167 134 aa19.79■□□□□ 0.76
CTDP1-208ENST00000613122 PRDX6P30041 224 aa19.79■□□□□ 0.76
CTDP1-208ENST00000613122 GNALP38405 381 aa19.79■□□□□ 0.76
CTDP1-208ENST00000613122 PAQR3Q6TCH7 311 aa19.79■□□□□ 0.76
CTDP1-208ENST00000613122 CLNKQ7Z7G1 428 aa19.79■□□□□ 0.76
CTDP1-208ENST00000613122 TDRPQ86YL5 185 aa19.79■□□□□ 0.76
CTDP1-208ENST00000613122 KMOO15229 486 aa19.78■□□□□ 0.76
CTDP1-208ENST00000613122 TNFRSF21O75509 655 aa19.78■□□□□ 0.76
CTDP1-208ENST00000613122 EIF2B2P49770 351 aaKnown RBP19.78■□□□□ 0.76
CTDP1-208ENST00000613122 PJA1Q8NG27 643 aa19.78■□□□□ 0.76
CTDP1-208ENST00000613122 GIPC3Q8TF64 312 aa19.78■□□□□ 0.76
CTDP1-208ENST00000613122 WDR60Q8WVS4 1066 aa19.78■□□□□ 0.76
CTDP1-208ENST00000613122 CRELD1Q96HD1 420 aa19.78■□□□□ 0.76
CTDP1-208ENST00000613122 NSMCE3Q96MG7 304 aa19.78■□□□□ 0.76
CTDP1-208ENST00000613122 KXD1Q9BQD3 176 aa19.78■□□□□ 0.76
CTDP1-208ENST00000613122 SMURF2Q9HAU4 748 aa19.78■□□□□ 0.76
CTDP1-208ENST00000613122 ZNF446Q9NWS9 450 aa19.78■□□□□ 0.76
CTDP1-208ENST00000613122 LGALS13Q9UHV8 139 aa19.78■□□□□ 0.76
CTDP1-208ENST00000613122 MED31Q9Y3C7 131 aa19.78■□□□□ 0.76
CTDP1-208ENST00000613122 MPZL2O60487 215 aa19.78■□□□□ 0.76
CTDP1-208ENST00000613122 MLLT6P55198 1093 aaPredicted RBP19.78■□□□□ 0.76
CTDP1-208ENST00000613122 MS4A13Q5J8X5 152 aa19.78■□□□□ 0.76
CTDP1-208ENST00000613122 LY6G5CQ5SRR4 150 aa19.78■□□□□ 0.76
CTDP1-208ENST00000613122 DENND5AQ6IQ26 1287 aa19.78■□□□□ 0.76
CTDP1-208ENST00000613122 FAM110BQ8TC76 370 aa19.78■□□□□ 0.76
CTDP1-208ENST00000613122 LDHAL6BQ9BYZ2 381 aaPredicted RBP19.78■□□□□ 0.76
CTDP1-208ENST00000613122 DGKBQ9Y6T7 804 aa19.78■□□□□ 0.76
CTDP1-208ENST00000613122 ERI3O43414 337 aaKnown RBP19.78■□□□□ 0.76
CTDP1-208ENST00000613122 TPST2O60704 377 aa19.78■□□□□ 0.76
CTDP1-208ENST00000613122 TULP3O75386 442 aa19.78■□□□□ 0.76
CTDP1-208ENST00000613122 PRKAR1AP10644 381 aa19.78■□□□□ 0.76
CTDP1-208ENST00000613122 MLIPQ5VWP3 458 aa19.78■□□□□ 0.76
CTDP1-208ENST00000613122 TNFAIP8L2Q6P589 184 aaPredicted RBP19.78■□□□□ 0.76
CTDP1-208ENST00000613122 TPRG1Q6ZUI0 275 aa19.78■□□□□ 0.76
CTDP1-208ENST00000613122 PYCR2Q96C36 320 aa19.78■□□□□ 0.76
CTDP1-208ENST00000613122 ART5Q96L15 291 aa19.78■□□□□ 0.76
CTDP1-208ENST00000613122 TTYH3Q9C0H2 523 aa19.78■□□□□ 0.76
CTDP1-208ENST00000613122 BCAS3Q9H6U6 928 aa19.78■□□□□ 0.76
CTDP1-208ENST00000613122 USP29Q9HBJ7 922 aa19.78■□□□□ 0.76
CTDP1-208ENST00000613122 TESMINQ9Y4I5 508 aa19.78■□□□□ 0.76
CTDP1-208ENST00000613122 CFAP20Q9Y6A4 193 aaKnown RBP19.78■□□□□ 0.76
CTDP1-208ENST00000613122 LRRC70Q7Z2Q7 622 aa19.78■□□□□ 0.76
CTDP1-208ENST00000613122 Q8N9G6 341 aaPredicted RBP19.78■□□□□ 0.76
CTDP1-208ENST00000613122 PSMA8Q8TAA3 256 aa19.78■□□□□ 0.76
CTDP1-208ENST00000613122 DENND1AQ8TEH3 1009 aa19.78■□□□□ 0.76
CTDP1-208ENST00000613122 SMPDL3AQ92484 453 aa19.78■□□□□ 0.76
CTDP1-208ENST00000613122 MKKSQ9NPJ1 570 aaPredicted RBP19.78■□□□□ 0.76
CTDP1-208ENST00000613122 TAC3Q9UHF0 121 aa19.78■□□□□ 0.76
CTDP1-208ENST00000613122 SALL4Q9UJQ4 1053 aa19.78■□□□□ 0.76
CTDP1-208ENST00000613122 TGFB1P01137 390 aa19.78■□□□□ 0.76
CTDP1-208ENST00000613122 RPL5P46777 297 aaKnown RBP19.78■□□□□ 0.76
CTDP1-208ENST00000613122 DNAJB8Q8NHS0 232 aa19.78■□□□□ 0.76
CTDP1-208ENST00000613122 CMTM7Q96FZ5 175 aa19.78■□□□□ 0.76
CTDP1-208ENST00000613122 ELOA3DA6NLF2 546 aaPredicted RBP19.77■□□□□ 0.76
CTDP1-208ENST00000613122 CBSLP0DN79 551 aa19.77■□□□□ 0.76
CTDP1-208ENST00000613122 CBSP35520 551 aa19.77■□□□□ 0.76
CTDP1-208ENST00000613122 AP1S2P56377 157 aa19.77■□□□□ 0.76
CTDP1-208ENST00000613122 PPP3R1P63098 170 aa19.77■□□□□ 0.76
CTDP1-208ENST00000613122 ELOA3BQ3SY89 546 aa19.77■□□□□ 0.76
CTDP1-208ENST00000613122 ARHGAP40Q5TG30 622 aa19.77■□□□□ 0.76
CTDP1-208ENST00000613122 FAM47BQ8NA70 645 aa19.77■□□□□ 0.76
CTDP1-208ENST00000613122 DCAF4L2Q8NA75 395 aa19.77■□□□□ 0.76
CTDP1-208ENST00000613122 ELOA3Q8NG57 546 aa19.77■□□□□ 0.76
CTDP1-208ENST00000613122 SLC35F5Q8WV83 523 aa19.77■□□□□ 0.76
CTDP1-208ENST00000613122 NARS2Q96I59 477 aaKnown RBP19.77■□□□□ 0.76
CTDP1-208ENST00000613122 CXCR6O00574 342 aa19.77■□□□□ 0.76
CTDP1-208ENST00000613122 HERVK_113P63132 956 aa19.77■□□□□ 0.76
CTDP1-208ENST00000613122 SMCO1Q147U7 214 aa19.77■□□□□ 0.76
CTDP1-208ENST00000613122 NPY5RQ15761 445 aa19.77■□□□□ 0.76
CTDP1-208ENST00000613122 CROCCP3Q8IVE0 287 aa19.77■□□□□ 0.76
CTDP1-208ENST00000613122 IQCKQ8N0W5 287 aa19.77■□□□□ 0.76
CTDP1-208ENST00000613122 ERVK-6Q9BXR3 956 aa19.77■□□□□ 0.76
CTDP1-208ENST00000613122 DHRS7Q9Y394 339 aa19.77■□□□□ 0.76
CTDP1-208ENST00000613122 CPSF4LA6NMK7 179 aaKnown RBP19.77■□□□□ 0.76
CTDP1-208ENST00000613122 FAM25EA8MYX2 175 aa19.77■□□□□ 0.76
CTDP1-208ENST00000613122 PLK4O00444 970 aa19.77■□□□□ 0.76
CTDP1-208ENST00000613122 ACADLP28330 430 aa19.77■□□□□ 0.76
CTDP1-208ENST00000613122 BTN3A2P78410 334 aa19.77■□□□□ 0.76
CTDP1-208ENST00000613122 LRRC66Q68CR7 880 aa19.77■□□□□ 0.76
CTDP1-208ENST00000613122 TRMT10BQ6PF06 316 aaKnown RBP19.77■□□□□ 0.76
CTDP1-208ENST00000613122 POC5Q8NA72 575 aa19.77■□□□□ 0.76
CTDP1-208ENST00000613122 TP53INP1Q96A56 240 aa19.77■□□□□ 0.76
CTDP1-208ENST00000613122 RNF121Q9H920 327 aa19.77■□□□□ 0.76
CTDP1-208ENST00000613122 S100A14Q9HCY8 104 aa19.77■□□□□ 0.76
CTDP1-208ENST00000613122 THUMPD1Q9NXG2 353 aaKnown RBP19.77■□□□□ 0.76
CTDP1-208ENST00000613122 SNED1Q8TER0 1413 aa19.77■□□□□ 0.75
CTDP1-208ENST00000613122 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP19.77■□□□□ 0.75
CTDP1-208ENST00000613122 GSC2O15499 205 aa19.77■□□□□ 0.75
CTDP1-208ENST00000613122 IL1R2P27930 398 aa19.77■□□□□ 0.75
CTDP1-208ENST00000613122 NRLP54845 237 aa19.77■□□□□ 0.75
CTDP1-208ENST00000613122 PDE12Q6L8Q7 609 aaKnown RBP19.77■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms