RNA–Protein interactions for RNA: ENST00000612417.4

CDH1-213, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 2,068 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-213ENST00000612417 VN1R2Q8NFZ6 395 aa14.37□□□□□ -0.11
CDH1-213ENST00000612417 VPS50Q96JG6 964 aa14.37□□□□□ -0.11
CDH1-213ENST00000612417 LMLNQ96KR4 655 aa14.37□□□□□ -0.11
CDH1-213ENST00000612417 ZNF583Q96ND8 569 aa14.37□□□□□ -0.11
CDH1-213ENST00000612417 DOK1Q99704 481 aa14.37□□□□□ -0.11
CDH1-213ENST00000612417 SLC25A13Q9UJS0 675 aa14.37□□□□□ -0.11
CDH1-213ENST00000612417 CDH7Q9ULB5 785 aa14.37□□□□□ -0.11
CDH1-213ENST00000612417 RGS14O43566 566 aa14.37□□□□□ -0.11
CDH1-213ENST00000612417 CLIC3O95833 236 aa14.37□□□□□ -0.11
CDH1-213ENST00000612417 IGSF6O95976 241 aa14.37□□□□□ -0.11
CDH1-213ENST00000612417 ALPIP09923 528 aa14.37□□□□□ -0.11
CDH1-213ENST00000612417 PABPC1P11940 636 aaKnown RBP14.37□□□□□ -0.11
CDH1-213ENST00000612417 CTPS1P17812 591 aa14.37□□□□□ -0.11
CDH1-213ENST00000612417 GKP32189 559 aa14.37□□□□□ -0.11
CDH1-213ENST00000612417 HSPA7P48741 367 aa14.37□□□□□ -0.11
CDH1-213ENST00000612417 ALDH3A2P51648 485 aa14.37□□□□□ -0.11
CDH1-213ENST00000612417 DGKQP52824 942 aa14.37□□□□□ -0.11
CDH1-213ENST00000612417 ARSFP54793 590 aa14.37□□□□□ -0.11
CDH1-213ENST00000612417 EMP3P54852 163 aa14.37□□□□□ -0.11
CDH1-213ENST00000612417 BCL2L1Q07817 233 aa14.37□□□□□ -0.11
CDH1-213ENST00000612417 FAM98BQ52LJ0 330 aaKnown RBP14.37□□□□□ -0.11
CDH1-213ENST00000612417 DGKKQ5KSL6 1271 aa14.37□□□□□ -0.11
CDH1-213ENST00000612417 CCNYL2Q5T2Q4 361 aa14.37□□□□□ -0.11
CDH1-213ENST00000612417 SULT1C3Q6IMI6 304 aa14.37□□□□□ -0.11
CDH1-213ENST00000612417 TBPL2Q6SJ96 375 aa14.37□□□□□ -0.11
CDH1-213ENST00000612417 FAM151BQ6UXP7 276 aa14.37□□□□□ -0.11
CDH1-213ENST00000612417 FKBP9P1Q75LS8 142 aa14.37□□□□□ -0.11
CDH1-213ENST00000612417 TRIM46Q7Z4K8 759 aa14.37□□□□□ -0.11
CDH1-213ENST00000612417 CLVS1Q8IUQ0 354 aaPredicted RBP14.37□□□□□ -0.11
CDH1-213ENST00000612417 OFCC1Q8IZS5 231 aa14.37□□□□□ -0.11
CDH1-213ENST00000612417 TERB1Q8NA31 727 aa14.37□□□□□ -0.11
CDH1-213ENST00000612417 OR52E4Q8NGH9 312 aa14.37□□□□□ -0.11
CDH1-213ENST00000612417 FAM81AQ8TBF8 368 aa14.37□□□□□ -0.11
CDH1-213ENST00000612417 SLC13A3Q8WWT9 602 aa14.37□□□□□ -0.11
CDH1-213ENST00000612417 OTUB2Q96DC9 234 aa14.37□□□□□ -0.11
CDH1-213ENST00000612417 ABHD8Q96I13 439 aa14.37□□□□□ -0.11
CDH1-213ENST00000612417 HBEGFQ99075 208 aa14.37□□□□□ -0.11
CDH1-213ENST00000612417 SLX1AQ9BQ83 275 aa14.37□□□□□ -0.11
CDH1-213ENST00000612417 BOCQ9BWV1 1114 aa14.37□□□□□ -0.11
CDH1-213ENST00000612417 CD244Q9BZW8 370 aa14.37□□□□□ -0.11
CDH1-213ENST00000612417 ZFYVE1Q9HBF4 777 aa14.37□□□□□ -0.11
CDH1-213ENST00000612417 PKD2L2Q9NZM6 624 aa14.37□□□□□ -0.11
CDH1-213ENST00000612417 PCDHGA11Q9Y5H2 935 aa14.37□□□□□ -0.11
CDH1-213ENST00000612417 PLXNB3Q9ULL4 1909 aa14.36□□□□□ -0.11
CDH1-213ENST00000612417 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP14.36□□□□□ -0.11
CDH1-213ENST00000612417 H0Y858 1186 aa14.36□□□□□ -0.11
CDH1-213ENST00000612417 SLC28A1O00337 649 aa14.36□□□□□ -0.11
CDH1-213ENST00000612417 KATNA1O75449 491 aa14.36□□□□□ -0.11
CDH1-213ENST00000612417 SEC24DO94855 1032 aaPredicted RBP14.36□□□□□ -0.11
CDH1-213ENST00000612417 HPRP00739 348 aa14.36□□□□□ -0.11
CDH1-213ENST00000612417 TRBC1P01850 177 aa14.36□□□□□ -0.11
CDH1-213ENST00000612417 MT-ND1P03886 318 aa14.36□□□□□ -0.11
CDH1-213ENST00000612417 ITGALP20701 1170 aa14.36□□□□□ -0.11
CDH1-213ENST00000612417 FSHRP23945 695 aa14.36□□□□□ -0.11
CDH1-213ENST00000612417 ACRV1P26436 265 aa14.36□□□□□ -0.11
CDH1-213ENST00000612417 DCKP27707 260 aa14.36□□□□□ -0.11
CDH1-213ENST00000612417 HLCSP50747 726 aa14.36□□□□□ -0.11
CDH1-213ENST00000612417 HABP4Q5JVS0 413 aaKnown RBP14.36□□□□□ -0.11
CDH1-213ENST00000612417 GPRC6AQ5T6X5 926 aa14.36□□□□□ -0.11
CDH1-213ENST00000612417 MACC1Q6ZN28 852 aa14.36□□□□□ -0.11
CDH1-213ENST00000612417 LKAAEAR1Q8TD35 194 aa14.36□□□□□ -0.11
CDH1-213ENST00000612417 GTF2H4Q92759 462 aa14.36□□□□□ -0.11
CDH1-213ENST00000612417 RHBDF1Q96CC6 855 aa14.36□□□□□ -0.11
CDH1-213ENST00000612417 CNDP2Q96KP4 475 aaKnown RBP14.36□□□□□ -0.11
CDH1-213ENST00000612417 RDH12Q96NR8 316 aa14.36□□□□□ -0.11
CDH1-213ENST00000612417 ZBTB18Q99592 522 aa14.36□□□□□ -0.11
CDH1-213ENST00000612417 NTMT1Q9BV86 223 aa14.36□□□□□ -0.11
CDH1-213ENST00000612417 PIF1Q9H611 641 aa14.36□□□□□ -0.11
CDH1-213ENST00000612417 RDH14Q9HBH5 336 aa14.36□□□□□ -0.11
CDH1-213ENST00000612417 VAPAQ9P0L0 249 aa14.36□□□□□ -0.11
CDH1-213ENST00000612417 TRPS1Q9UHF7 1281 aa14.36□□□□□ -0.11
CDH1-213ENST00000612417 EIF3LQ9Y262 564 aaKnown RBP14.36□□□□□ -0.11
CDH1-213ENST00000612417 NUP210Q8TEM1 1887 aaPredicted RBP14.36□□□□□ -0.11
CDH1-213ENST00000612417 REV3LO60673 3130 aa14.36□□□□□ -0.11
CDH1-213ENST00000612417 TRIM64BA6NI03 449 aa14.35□□□□□ -0.11
CDH1-213ENST00000612417 SOCS5O75159 536 aa14.35□□□□□ -0.11
CDH1-213ENST00000612417 ALBP02768 609 aa14.35□□□□□ -0.11
CDH1-213ENST00000612417 ALPLP05186 524 aa14.35□□□□□ -0.11
CDH1-213ENST00000612417 SRCP12931 536 aa14.35□□□□□ -0.11
CDH1-213ENST00000612417 TCF3P15923 654 aa14.35□□□□□ -0.11
CDH1-213ENST00000612417 AKT1P31749 480 aa14.35□□□□□ -0.11
CDH1-213ENST00000612417 SOX11P35716 441 aa14.35□□□□□ -0.11
CDH1-213ENST00000612417 CSNK1DP48730 415 aa14.35□□□□□ -0.11
CDH1-213ENST00000612417 SNRPD1P62314 119 aaKnown RBP14.35□□□□□ -0.11
CDH1-213ENST00000612417 RPL38P63173 70 aaKnown RBP14.35□□□□□ -0.11
CDH1-213ENST00000612417 CTBSQ01459 385 aa14.35□□□□□ -0.11
CDH1-213ENST00000612417 CHRNB3Q05901 458 aa14.35□□□□□ -0.11
CDH1-213ENST00000612417 DAG1Q14118 895 aa14.35□□□□□ -0.11
CDH1-213ENST00000612417 CDKN3Q16667 212 aa14.35□□□□□ -0.11
CDH1-213ENST00000612417 ZBTB2Q8N680 514 aa14.35□□□□□ -0.11
CDH1-213ENST00000612417 ZNF557Q8N988 423 aaPredicted RBP14.35□□□□□ -0.11
CDH1-213ENST00000612417 ZNF548Q8NEK5 533 aaPredicted RBP14.35□□□□□ -0.11
CDH1-213ENST00000612417 ST13P5Q8NFI4 369 aaPredicted RBP14.35□□□□□ -0.11
CDH1-213ENST00000612417 C12orf43Q96C57 262 aaKnown RBP14.35□□□□□ -0.11
CDH1-213ENST00000612417 LRRC3BQ96PB8 259 aa14.35□□□□□ -0.11
CDH1-213ENST00000612417 TUBA1CQ9BQE3 449 aa14.35□□□□□ -0.11
CDH1-213ENST00000612417 ASB8Q9H765 288 aa14.35□□□□□ -0.11
CDH1-213ENST00000612417 LIN28AQ9H9Z2 209 aaKnown RBP14.35□□□□□ -0.11
CDH1-213ENST00000612417 IL26Q9NPH9 171 aa14.35□□□□□ -0.11
CDH1-213ENST00000612417 OPTCQ9UBM4 332 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms