RNA–Protein interactions for RNA: ENST00000612404.4

SREK1-216, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 1 (best) BASIC

Gene SREK1, Length 2,128 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-216ENST00000612404 TBC1D21Q8IYX1 336 aa17.06■□□□□ 0.32
SREK1-216ENST00000612404 LSMEM2Q8N112 164 aa17.06■□□□□ 0.32
SREK1-216ENST00000612404 BCAS4Q8TDM0 211 aa17.06■□□□□ 0.32
SREK1-216ENST00000612404 TRPC4APQ8TEL6 797 aa17.06■□□□□ 0.32
SREK1-216ENST00000612404 RAD51AP1Q96B01 352 aa17.06■□□□□ 0.32
SREK1-216ENST00000612404 ZC3H10Q96K80 434 aaKnown RBP17.06■□□□□ 0.32
SREK1-216ENST00000612404 C1QTNF3Q9BXJ4 246 aa17.06■□□□□ 0.32
SREK1-216ENST00000612404 EML4Q9HC35 981 aaKnown RBP17.06■□□□□ 0.32
SREK1-216ENST00000612404 SUSD2Q9UGT4 822 aa17.06■□□□□ 0.32
SREK1-216ENST00000612404 PILRBQ9UKJ0 227 aa17.06■□□□□ 0.32
SREK1-216ENST00000612404 ANGPTL3Q9Y5C1 460 aa17.06■□□□□ 0.32
SREK1-216ENST00000612404 ARHGEF17Q96PE2 2063 aaPredicted RBP17.06■□□□□ 0.32
SREK1-216ENST00000612404 FAM107AO95990 144 aa17.06■□□□□ 0.32
SREK1-216ENST00000612404 RBBP7Q16576 425 aa17.06■□□□□ 0.32
SREK1-216ENST00000612404 AGTRAPQ6RW13 159 aa17.06■□□□□ 0.32
SREK1-216ENST00000612404 WASH2PQ6VEQ5 465 aa17.06■□□□□ 0.32
SREK1-216ENST00000612404 TEX9Q8N6V9 391 aa17.06■□□□□ 0.32
SREK1-216ENST00000612404 ZBTB44Q8NCP5 570 aa17.06■□□□□ 0.32
SREK1-216ENST00000612404 ZNF483Q8TF39 744 aaPredicted RBP17.06■□□□□ 0.32
SREK1-216ENST00000612404 UBTD2Q8WUN7 234 aa17.06■□□□□ 0.32
SREK1-216ENST00000612404 PYCR2Q96C36 320 aa17.06■□□□□ 0.32
SREK1-216ENST00000612404 MED8Q96G25 268 aa17.06■□□□□ 0.32
SREK1-216ENST00000612404 TRMOQ9BU70 441 aa17.06■□□□□ 0.32
SREK1-216ENST00000612404 ILKAPQ9H0C8 392 aaPredicted RBP17.06■□□□□ 0.32
SREK1-216ENST00000612404 C11orf16Q9NQ32 467 aa17.06■□□□□ 0.32
SREK1-216ENST00000612404 WASH6PQ9NQA3 447 aa17.06■□□□□ 0.32
SREK1-216ENST00000612404 ABCF3Q9NUQ8 709 aa17.06■□□□□ 0.32
SREK1-216ENST00000612404 PCOLCE2Q9UKZ9 415 aa17.06■□□□□ 0.32
SREK1-216ENST00000612404 HEBP2Q9Y5Z4 205 aa17.06■□□□□ 0.32
SREK1-216ENST00000612404 MYO15AQ9UKN7 3530 aa17.06■□□□□ 0.32
SREK1-216ENST00000612404 MTHFD1P11586 935 aaKnown RBP17.05■□□□□ 0.32
SREK1-216ENST00000612404 F3P13726 295 aa17.05■□□□□ 0.32
SREK1-216ENST00000612404 MPSTP25325 297 aa17.05■□□□□ 0.32
SREK1-216ENST00000612404 IMPA1P29218 277 aa17.05■□□□□ 0.32
SREK1-216ENST00000612404 GGT5P36269 586 aa17.05■□□□□ 0.32
SREK1-216ENST00000612404 HNRNPKP61978 463 aaKnown RBP eCLIP17.05■□□□□ 0.32
SREK1-216ENST00000612404 GTF2H2Q13888 395 aa17.05■□□□□ 0.32
SREK1-216ENST00000612404 ELOCQ15369 112 aa17.05■□□□□ 0.32
SREK1-216ENST00000612404 ZXDCQ2QGD7 858 aaPredicted RBP17.05■□□□□ 0.32
SREK1-216ENST00000612404 PTCHD3Q3KNS1 767 aa17.05■□□□□ 0.32
SREK1-216ENST00000612404 GTF2H2CQ6P1K8 395 aa17.05■□□□□ 0.32
SREK1-216ENST00000612404 SYTL1Q8IYJ3 562 aa17.05■□□□□ 0.32
SREK1-216ENST00000612404 ZNF781Q8N8C0 355 aa17.05■□□□□ 0.32
SREK1-216ENST00000612404 PPFIBP2Q8ND30 876 aa17.05■□□□□ 0.32
SREK1-216ENST00000612404 LMX1AQ8TE12 382 aa17.05■□□□□ 0.32
SREK1-216ENST00000612404 ELAC2Q9BQ52 826 aaKnown RBP17.05■□□□□ 0.32
SREK1-216ENST00000612404 NPHS2Q9NP85 383 aa17.05■□□□□ 0.32
SREK1-216ENST00000612404 PCDHGA2Q9Y5H1 932 aa17.05■□□□□ 0.32
SREK1-216ENST00000612404 TNRC6BQ9UPQ9 1833 aaKnown RBP17.05■□□□□ 0.32
SREK1-216ENST00000612404 CACNA1EQ15878 2313 aa17.05■□□□□ 0.32
SREK1-216ENST00000612404 K7EPI3 171 aa17.05■□□□□ 0.32
SREK1-216ENST00000612404 PPP6CO00743 305 aa17.05■□□□□ 0.32
SREK1-216ENST00000612404 NDUFAB1O14561 156 aa17.05■□□□□ 0.32
SREK1-216ENST00000612404 WDR47O94967 919 aa17.05■□□□□ 0.32
SREK1-216ENST00000612404 ARL1P40616 181 aaPredicted RBP17.05■□□□□ 0.32
SREK1-216ENST00000612404 LCP2Q13094 533 aa17.05■□□□□ 0.32
SREK1-216ENST00000612404 NAE1Q13564 534 aa17.05■□□□□ 0.32
SREK1-216ENST00000612404 TSTA3Q13630 321 aaPredicted RBP17.05■□□□□ 0.32
SREK1-216ENST00000612404 LPAL2Q16609 132 aa17.05■□□□□ 0.32
SREK1-216ENST00000612404 KIF19Q2TAC6 998 aa17.05■□□□□ 0.32
SREK1-216ENST00000612404 CGB2Q6NT52 195 aa17.05■□□□□ 0.32
SREK1-216ENST00000612404 GOLGA7Q7Z5G4 137 aa17.05■□□□□ 0.32
SREK1-216ENST00000612404 SYT12Q8IV01 421 aa17.05■□□□□ 0.32
SREK1-216ENST00000612404 ZNF480Q8WV37 535 aa17.05■□□□□ 0.32
SREK1-216ENST00000612404 CXorf40BQ96DE9 158 aa17.05■□□□□ 0.32
SREK1-216ENST00000612404 IL17FQ96PD4 163 aa17.05■□□□□ 0.32
SREK1-216ENST00000612404 MVB12BQ9H7P6 319 aa17.05■□□□□ 0.32
SREK1-216ENST00000612404 PNPOQ9NVS9 261 aa17.05■□□□□ 0.32
SREK1-216ENST00000612404 DOLKQ9UPQ8 538 aa17.05■□□□□ 0.32
SREK1-216ENST00000612404 RAP2CQ9Y3L5 183 aa17.05■□□□□ 0.32
SREK1-216ENST00000612404 SNX11Q9Y5W9 270 aa17.05■□□□□ 0.32
SREK1-216ENST00000612404 COLEC10Q9Y6Z7 277 aa17.05■□□□□ 0.32
SREK1-216ENST00000612404 TP53BP1Q12888 1972 aaPredicted RBP17.04■□□□□ 0.32
SREK1-216ENST00000612404 PI4KAP42356 2102 aa17.04■□□□□ 0.32
SREK1-216ENST00000612404 KMT2EQ8IZD2 1858 aa17.04■□□□□ 0.32
SREK1-216ENST00000612404 PRAMEF33A0A0G2JMD5 474 aa17.04■□□□□ 0.32
SREK1-216ENST00000612404 A6NCN8 305 aa17.04■□□□□ 0.32
SREK1-216ENST00000612404 UBFD1O14562 309 aaKnown RBP17.04■□□□□ 0.32
SREK1-216ENST00000612404 SDC3O75056 442 aa17.04■□□□□ 0.32
SREK1-216ENST00000612404 NAA20P61599 178 aa17.04■□□□□ 0.32
SREK1-216ENST00000612404 PRKAA1Q13131 559 aa17.04■□□□□ 0.32
SREK1-216ENST00000612404 TERF2Q15554 542 aa17.04■□□□□ 0.32
SREK1-216ENST00000612404 CUZD1Q86UP6 607 aa17.04■□□□□ 0.32
SREK1-216ENST00000612404 FAM46DQ8NEK8 389 aa17.04■□□□□ 0.32
SREK1-216ENST00000612404 ATP6V1E2Q96A05 226 aa17.04■□□□□ 0.32
SREK1-216ENST00000612404 CAMK1GQ96NX5 476 aa17.04■□□□□ 0.32
SREK1-216ENST00000612404 SLC32A1Q9H598 525 aa17.04■□□□□ 0.32
SREK1-216ENST00000612404 NOL11Q9H8H0 719 aaKnown RBP17.04■□□□□ 0.32
SREK1-216ENST00000612404 ZBTB26Q9HCK0 441 aa17.04■□□□□ 0.32
SREK1-216ENST00000612404 SPASTQ9UBP0 616 aa17.04■□□□□ 0.32
SREK1-216ENST00000612404 POLG2Q9UHN1 485 aa17.04■□□□□ 0.32
SREK1-216ENST00000612404 ZDHHC2Q9UIJ5 367 aa17.04■□□□□ 0.32
SREK1-216ENST00000612404 LNPEPQ9UIQ6 1025 aa17.04■□□□□ 0.32
SREK1-216ENST00000612404 SNUPNO95149 360 aaKnown RBP17.03■□□□□ 0.32
SREK1-216ENST00000612404 MLYCDO95822 493 aa17.03■□□□□ 0.32
SREK1-216ENST00000612404 TROVE2P10155 538 aaKnown RBP eCLIP17.03■□□□□ 0.32
SREK1-216ENST00000612404 SLC6A12P48065 614 aa17.03■□□□□ 0.32
SREK1-216ENST00000612404 GRB7Q14451 532 aa17.03■□□□□ 0.32
SREK1-216ENST00000612404 SH2D4BQ5SQS7 431 aa17.03■□□□□ 0.32
SREK1-216ENST00000612404 METTL2BQ6P1Q9 378 aaKnown RBP17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms