RNA–Protein interactions for RNA: ENST00000607841.5

CTSA-219, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 571 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-219ENST00000607841 CNTFP26441 200 aa13.82□□□□□ -0.2
CTSA-219ENST00000607841 CRABP2P29373 138 aa13.82□□□□□ -0.2
CTSA-219ENST00000607841 PKLRP30613 574 aa13.82□□□□□ -0.2
CTSA-219ENST00000607841 BDKRB1P46663 353 aa13.82□□□□□ -0.2
CTSA-219ENST00000607841 LSSP48449 732 aa13.82□□□□□ -0.2
CTSA-219ENST00000607841 SERPINB9P50453 376 aa13.82□□□□□ -0.2
CTSA-219ENST00000607841 RAB10P61026 200 aa13.82□□□□□ -0.2
CTSA-219ENST00000607841 VSNL1P62760 191 aa13.82□□□□□ -0.2
CTSA-219ENST00000607841 CAMK2BQ13554 666 aa13.82□□□□□ -0.2
CTSA-219ENST00000607841 GRB7Q14451 532 aa13.82□□□□□ -0.2
CTSA-219ENST00000607841 KIR2DS3Q14952 304 aa13.82□□□□□ -0.2
CTSA-219ENST00000607841 ARHGAP19Q14CB8 494 aa13.82□□□□□ -0.2
CTSA-219ENST00000607841 LGSNQ5TDP6 509 aa13.82□□□□□ -0.2
CTSA-219ENST00000607841 CACHD1Q5VU97 1274 aa13.82□□□□□ -0.2
CTSA-219ENST00000607841 ANKS6Q68DC2 871 aa13.82□□□□□ -0.2
CTSA-219ENST00000607841 FAM92BQ6ZTR7 304 aa13.82□□□□□ -0.2
CTSA-219ENST00000607841 RAPH1Q70E73 1250 aa13.82□□□□□ -0.2
CTSA-219ENST00000607841 PRSS42Q7Z5A4 293 aa13.82□□□□□ -0.2
CTSA-219ENST00000607841 ARHGAP22Q7Z5H3 698 aa13.82□□□□□ -0.2
CTSA-219ENST00000607841 CCDC91Q7Z6B0 441 aa13.82□□□□□ -0.2
CTSA-219ENST00000607841 CEP97Q8IW35 865 aa13.82□□□□□ -0.2
CTSA-219ENST00000607841 ADGRF3Q8IZF5 1079 aa13.82□□□□□ -0.2
CTSA-219ENST00000607841 FBXO39Q8N4B4 442 aa13.82□□□□□ -0.2
CTSA-219ENST00000607841 RCBTB1Q8NDN9 531 aa13.82□□□□□ -0.2
CTSA-219ENST00000607841 OR2L8Q8NGY9 312 aa13.82□□□□□ -0.2
CTSA-219ENST00000607841 UHMK1Q8TAS1 419 aaKnown RBP13.82□□□□□ -0.2
CTSA-219ENST00000607841 SLC44A1Q8WWI5 657 aa13.82□□□□□ -0.2
CTSA-219ENST00000607841 ANKRD7Q92527 254 aa13.82□□□□□ -0.2
CTSA-219ENST00000607841 HIST1H2AHQ96KK5 128 aa13.82□□□□□ -0.2
CTSA-219ENST00000607841 HIST1H2AJQ99878 128 aa13.82□□□□□ -0.2
CTSA-219ENST00000607841 H2AFJQ9BTM1 129 aa13.82□□□□□ -0.2
CTSA-219ENST00000607841 SLC12A9Q9BXP2 914 aa13.82□□□□□ -0.2
CTSA-219ENST00000607841 TRIM54Q9BYV2 358 aa13.82□□□□□ -0.2
CTSA-219ENST00000607841 POLR1BQ9H9Y6 1135 aa13.82□□□□□ -0.2
CTSA-219ENST00000607841 ACTR10Q9NZ32 417 aa13.82□□□□□ -0.2
CTSA-219ENST00000607841 PLAGL1Q9UM63 463 aa13.82□□□□□ -0.2
CTSA-219ENST00000607841 LOXL2Q9Y4K0 774 aa13.82□□□□□ -0.2
CTSA-219ENST00000607841 PCDHGA8Q9Y5G5 932 aa13.82□□□□□ -0.2
CTSA-219ENST00000607841 AK5Q9Y6K8 562 aa13.82□□□□□ -0.2
CTSA-219ENST00000607841 NCOR2Q9Y618 2525 aa13.81□□□□□ -0.2
CTSA-219ENST00000607841 TLCD2A6NGC4 264 aa13.81□□□□□ -0.2
CTSA-219ENST00000607841 POC1B-GALNT4F8VUJ3 575 aa13.81□□□□□ -0.2
CTSA-219ENST00000607841 PLD2O14939 933 aa13.81□□□□□ -0.2
CTSA-219ENST00000607841 KRT38O76015 456 aa13.81□□□□□ -0.2
CTSA-219ENST00000607841 TSPAN12O95859 305 aa13.81□□□□□ -0.2
CTSA-219ENST00000607841 SYF2O95926 243 aaKnown RBP13.81□□□□□ -0.2
CTSA-219ENST00000607841 CHRM5P08912 532 aaPredicted RBP13.81□□□□□ -0.2
CTSA-219ENST00000607841 PRDX3P30048 256 aaKnown RBP13.81□□□□□ -0.2
CTSA-219ENST00000607841 ARL4DP49703 201 aa13.81□□□□□ -0.2
CTSA-219ENST00000607841 GABREP78334 506 aa13.81□□□□□ -0.2
CTSA-219ENST00000607841 SLC29A2Q14542 456 aa13.81□□□□□ -0.2
CTSA-219ENST00000607841 C16orf72Q14CZ0 275 aa13.81□□□□□ -0.2
CTSA-219ENST00000607841 RTP5Q14D33 572 aa13.81□□□□□ -0.2
CTSA-219ENST00000607841 ZKSCAN8Q15776 578 aaPredicted RBP13.81□□□□□ -0.2
CTSA-219ENST00000607841 CCSMST1Q4G0I0 132 aa13.81□□□□□ -0.2
CTSA-219ENST00000607841 C3orf38Q5JPI3 329 aa13.81□□□□□ -0.2
CTSA-219ENST00000607841 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.81□□□□□ -0.2
CTSA-219ENST00000607841 UBAP2Q5T6F2 1119 aaKnown RBP13.81□□□□□ -0.2
CTSA-219ENST00000607841 MROH9Q5TGP6 573 aa13.81□□□□□ -0.2
CTSA-219ENST00000607841 CYB5D1Q6P9G0 228 aa13.81□□□□□ -0.2
CTSA-219ENST00000607841 EMBQ6PCB8 327 aa13.81□□□□□ -0.2
CTSA-219ENST00000607841 KMT5CQ86Y97 462 aa13.81□□□□□ -0.2
CTSA-219ENST00000607841 RASGRP3Q8IV61 690 aa13.81□□□□□ -0.2
CTSA-219ENST00000607841 HMGCLL1Q8TB92 370 aa13.81□□□□□ -0.2
CTSA-219ENST00000607841 UBLCP1Q8WVY7 318 aaPredicted RBP13.81□□□□□ -0.2
CTSA-219ENST00000607841 PAFAH2Q99487 392 aa13.81□□□□□ -0.2
CTSA-219ENST00000607841 MENTQ9BUN1 341 aa13.81□□□□□ -0.2
CTSA-219ENST00000607841 ZNF768Q9H5H4 540 aaKnown RBP13.81□□□□□ -0.2
CTSA-219ENST00000607841 CAB39LQ9H9S4 337 aa13.81□□□□□ -0.2
CTSA-219ENST00000607841 PARVBQ9HBI1 364 aa13.81□□□□□ -0.2
CTSA-219ENST00000607841 C1GALT1Q9NS00 363 aa13.81□□□□□ -0.2
CTSA-219ENST00000607841 FETUBQ9UGM5 382 aa13.81□□□□□ -0.2
CTSA-219ENST00000607841 ZNF180Q9UJW8 692 aa13.81□□□□□ -0.2
CTSA-219ENST00000607841 POMT2Q9UKY4 750 aa13.81□□□□□ -0.2
CTSA-219ENST00000607841 SATB2Q9UPW6 733 aa13.81□□□□□ -0.2
CTSA-219ENST00000607841 ASXL3Q9C0F0 2248 aa13.8□□□□□ -0.2
CTSA-219ENST00000607841 SPEGQ15772 3267 aa13.8□□□□□ -0.2
CTSA-219ENST00000607841 ISM1B1AKI9 464 aa13.8□□□□□ -0.2
CTSA-219ENST00000607841 MPOP05164 745 aa13.8□□□□□ -0.2
CTSA-219ENST00000607841 ENO2P09104 434 aaPredicted RBP13.8□□□□□ -0.2
CTSA-219ENST00000607841 CDH3P22223 829 aa13.8□□□□□ -0.2
CTSA-219ENST00000607841 RBMS1P29558 406 aaKnown RBP13.8□□□□□ -0.2
CTSA-219ENST00000607841 SLC26A3P40879 764 aa13.8□□□□□ -0.2
CTSA-219ENST00000607841 MLLT3P42568 568 aaPredicted RBP13.8□□□□□ -0.2
CTSA-219ENST00000607841 KPNA2P52292 529 aaKnown RBP13.8□□□□□ -0.2
CTSA-219ENST00000607841 PGGT1BP53609 377 aa13.8□□□□□ -0.2
CTSA-219ENST00000607841 ATP6V0D1P61421 351 aa13.8□□□□□ -0.2
CTSA-219ENST00000607841 ZNF460Q14592 562 aa13.8□□□□□ -0.2
CTSA-219ENST00000607841 CYP2A13Q16696 494 aa13.8□□□□□ -0.2
CTSA-219ENST00000607841 FOXR1Q6PIV2 292 aa13.8□□□□□ -0.2
CTSA-219ENST00000607841 TMEM207Q6UWW9 146 aa13.8□□□□□ -0.2
CTSA-219ENST00000607841 KLHL6Q8WZ60 621 aa13.8□□□□□ -0.2
CTSA-219ENST00000607841 CCDC138Q96M89 665 aa13.8□□□□□ -0.2
CTSA-219ENST00000607841 IL17FQ96PD4 163 aa13.8□□□□□ -0.2
CTSA-219ENST00000607841 PKP4Q99569 1192 aa13.8□□□□□ -0.2
CTSA-219ENST00000607841 MAP3K3Q99759 626 aa13.8□□□□□ -0.2
CTSA-219ENST00000607841 PARD6BQ9BYG5 372 aa13.8□□□□□ -0.2
CTSA-219ENST00000607841 SEMA5BQ9P283 1151 aa13.8□□□□□ -0.2
CTSA-219ENST00000607841 CIDEBQ9UHD4 219 aa13.8□□□□□ -0.2
CTSA-219ENST00000607841 TLK1Q9UKI8 766 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms