RNA–Protein interactions for RNA: ENST00000606752.1

USP6NL-204, Transcript of USP6 N-terminal like, humanhuman

TSL 1 (best)

Gene USP6NL, Length 1,823 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-204ENST00000606752 ACSL5Q9ULC5 683 aa21.01■□□□□ 0.95
USP6NL-204ENST00000606752 FAM170BA6NMN3 283 aa21■□□□□ 0.95
USP6NL-204ENST00000606752 C10orf142B7Z368 130 aa21■□□□□ 0.95
USP6NL-204ENST00000606752 CLDN9O95484 217 aa21■□□□□ 0.95
USP6NL-204ENST00000606752 LBPP18428 481 aa21■□□□□ 0.95
USP6NL-204ENST00000606752 ITPKAP23677 461 aa21■□□□□ 0.95
USP6NL-204ENST00000606752 IMPA1P29218 277 aa21■□□□□ 0.95
USP6NL-204ENST00000606752 CLDN2P57739 230 aa21■□□□□ 0.95
USP6NL-204ENST00000606752 KIAA1024LP59773 190 aa21■□□□□ 0.95
USP6NL-204ENST00000606752 TCHHL1Q5QJ38 904 aaPredicted RBP21■□□□□ 0.95
USP6NL-204ENST00000606752 SPDYE1Q8NFV5 336 aaPredicted RBP21■□□□□ 0.95
USP6NL-204ENST00000606752 OR56A3Q8NH54 315 aa21■□□□□ 0.95
USP6NL-204ENST00000606752 SCARF2Q96GP6 870 aaPredicted RBP21■□□□□ 0.95
USP6NL-204ENST00000606752 UHRF1Q96T88 793 aaPredicted RBP21■□□□□ 0.95
USP6NL-204ENST00000606752 TBC1D10AQ9BXI6 508 aa21■□□□□ 0.95
USP6NL-204ENST00000606752 ACTR8Q9H981 624 aa21■□□□□ 0.95
USP6NL-204ENST00000606752 RNF11Q9Y3C5 154 aa21■□□□□ 0.95
USP6NL-204ENST00000606752 LOC100653049A0A140TA62 436 aa20.99■□□□□ 0.95
USP6NL-204ENST00000606752 GYG2O15488 501 aa20.99■□□□□ 0.95
USP6NL-204ENST00000606752 KCNJ13O60928 360 aa20.99■□□□□ 0.95
USP6NL-204ENST00000606752 KRT34O76011 436 aa20.99■□□□□ 0.95
USP6NL-204ENST00000606752 THRAP10827 490 aa20.99■□□□□ 0.95
USP6NL-204ENST00000606752 COX4I1P13073 169 aa20.99■□□□□ 0.95
USP6NL-204ENST00000606752 NAE1Q13564 534 aa20.99■□□□□ 0.95
USP6NL-204ENST00000606752 SQLEQ14534 574 aa20.99■□□□□ 0.95
USP6NL-204ENST00000606752 PYCR3Q53H96 274 aa20.99■□□□□ 0.95
USP6NL-204ENST00000606752 IL27RAQ6UWB1 636 aa20.99■□□□□ 0.95
USP6NL-204ENST00000606752 SCIMPQ6UWF3 145 aa20.99■□□□□ 0.95
USP6NL-204ENST00000606752 GALNT13Q8IUC8 556 aa20.99■□□□□ 0.95
USP6NL-204ENST00000606752 POU5F2Q8N7G0 328 aa20.99■□□□□ 0.95
USP6NL-204ENST00000606752 TSTD1Q8NFU3 115 aa20.99■□□□□ 0.95
USP6NL-204ENST00000606752 OR9A1PQ8NGU1 263 aa20.99■□□□□ 0.95
USP6NL-204ENST00000606752 TFGQ92734 400 aaPredicted RBP20.99■□□□□ 0.95
USP6NL-204ENST00000606752 BMFQ96LC9 184 aa20.99■□□□□ 0.95
USP6NL-204ENST00000606752 INTS7Q9NVH2 962 aaKnown RBP20.99■□□□□ 0.95
USP6NL-204ENST00000606752 RIC8BQ9NVN3 520 aa20.99■□□□□ 0.95
USP6NL-204ENST00000606752 C2orf42Q9NWW7 574 aa20.99■□□□□ 0.95
USP6NL-204ENST00000606752 ASF1AQ9Y294 204 aa20.99■□□□□ 0.95
USP6NL-204ENST00000606752 PRR35P0CG20 571 aa20.99■□□□□ 0.95
USP6NL-204ENST00000606752 ACP5P13686 325 aa20.99■□□□□ 0.95
USP6NL-204ENST00000606752 OGFOD2Q6N063 350 aa20.99■□□□□ 0.95
USP6NL-204ENST00000606752 RNF165Q6ZSG1 346 aa20.99■□□□□ 0.95
USP6NL-204ENST00000606752 THOC6Q86W42 341 aaKnown RBP20.99■□□□□ 0.95
USP6NL-204ENST00000606752 RAB3IPQ96QF0 476 aaPredicted RBP20.99■□□□□ 0.95
USP6NL-204ENST00000606752 SLC29A3Q9BZD2 475 aa20.99■□□□□ 0.95
USP6NL-204ENST00000606752 CIDEBQ9UHD4 219 aa20.99■□□□□ 0.95
USP6NL-204ENST00000606752 MOSPD1Q9UJG1 213 aa20.99■□□□□ 0.95
USP6NL-204ENST00000606752 SUFUQ9UMX1 484 aa20.99■□□□□ 0.95
USP6NL-204ENST00000606752 IFRD1O00458 451 aaPredicted RBP20.98■□□□□ 0.95
USP6NL-204ENST00000606752 OXTRP30559 389 aa20.98■□□□□ 0.95
USP6NL-204ENST00000606752 AKT2P31751 481 aa20.98■□□□□ 0.95
USP6NL-204ENST00000606752 MAGEA9P43362 315 aa20.98■□□□□ 0.95
USP6NL-204ENST00000606752 HTR6P50406 440 aa20.98■□□□□ 0.95
USP6NL-204ENST00000606752 ATP4BP51164 291 aa20.98■□□□□ 0.95
USP6NL-204ENST00000606752 GRB7Q14451 532 aa20.98■□□□□ 0.95
USP6NL-204ENST00000606752 GGTA1PQ4G0N0 100 aa20.98■□□□□ 0.95
USP6NL-204ENST00000606752 MYLK4Q86YV6 388 aaPredicted RBP20.98■□□□□ 0.95
USP6NL-204ENST00000606752 L3MBTL4Q8NA19 623 aa20.98■□□□□ 0.95
USP6NL-204ENST00000606752 RP9Q8TA86 221 aaKnown RBP20.98■□□□□ 0.95
USP6NL-204ENST00000606752 FOXQ1Q9C009 403 aa20.98■□□□□ 0.95
USP6NL-204ENST00000606752 C1orf21Q9H246 121 aa20.98■□□□□ 0.95
USP6NL-204ENST00000606752 MRPL40Q9NQ50 206 aaKnown RBP20.98■□□□□ 0.95
USP6NL-204ENST00000606752 PSMD13Q9UNM6 376 aa20.98■□□□□ 0.95
USP6NL-204ENST00000606752 CYP8B1Q9UNU6 501 aa20.98■□□□□ 0.95
USP6NL-204ENST00000606752 ZFC3H1O60293 1989 aaKnown RBP20.98■□□□□ 0.95
USP6NL-204ENST00000606752 PEX11AO75192 247 aa20.97■□□□□ 0.95
USP6NL-204ENST00000606752 ULK1O75385 1050 aa20.97■□□□□ 0.95
USP6NL-204ENST00000606752 KRT16P08779 473 aa20.97■□□□□ 0.95
USP6NL-204ENST00000606752 ALDOCP09972 364 aaKnown RBP20.97■□□□□ 0.95
USP6NL-204ENST00000606752 KELP23276 732 aa20.97■□□□□ 0.95
USP6NL-204ENST00000606752 CCR5P51681 352 aa20.97■□□□□ 0.95
USP6NL-204ENST00000606752 NFATC4Q14934 902 aa20.97■□□□□ 0.95
USP6NL-204ENST00000606752 ABRAXAS2Q15018 415 aa20.97■□□□□ 0.95
USP6NL-204ENST00000606752 HERC3Q15034 1050 aa20.97■□□□□ 0.95
USP6NL-204ENST00000606752 Q6ZSR9 355 aa20.97■□□□□ 0.95
USP6NL-204ENST00000606752 SPATA19Q7Z5L4 167 aa20.97■□□□□ 0.95
USP6NL-204ENST00000606752 SIX5Q8N196 739 aa20.97■□□□□ 0.95
USP6NL-204ENST00000606752 RBM15BQ8NDT2 890 aaKnown RBP20.97■□□□□ 0.95
USP6NL-204ENST00000606752 OR2T11Q8NH01 316 aa20.97■□□□□ 0.95
USP6NL-204ENST00000606752 ZNF480Q8WV37 535 aa20.97■□□□□ 0.95
USP6NL-204ENST00000606752 RAD51AP1Q96B01 352 aa20.97■□□□□ 0.95
USP6NL-204ENST00000606752 MED8Q96G25 268 aa20.97■□□□□ 0.95
USP6NL-204ENST00000606752 TOE1Q96GM8 510 aaKnown RBP20.97■□□□□ 0.95
USP6NL-204ENST00000606752 MAGEB10Q96LZ2 347 aaPredicted RBP20.97■□□□□ 0.95
USP6NL-204ENST00000606752 MIPEPQ99797 713 aa20.97■□□□□ 0.95
USP6NL-204ENST00000606752 FGF22Q9HCT0 170 aa20.97■□□□□ 0.95
USP6NL-204ENST00000606752 WSB2Q9NYS7 404 aaPredicted RBP20.97■□□□□ 0.95
USP6NL-204ENST00000606752 GIMAP2Q9UG22 337 aa20.97■□□□□ 0.95
USP6NL-204ENST00000606752 CA5BQ9Y2D0 317 aa20.97■□□□□ 0.95
USP6NL-204ENST00000606752 GPSM3Q9Y4H4 160 aa20.97■□□□□ 0.95
USP6NL-204ENST00000606752 HS3ST3A1Q9Y663 406 aa20.97■□□□□ 0.95
USP6NL-204ENST00000606752 FFAR3O14843 346 aa20.97■□□□□ 0.95
USP6NL-204ENST00000606752 GPR42O15529 346 aa20.97■□□□□ 0.95
USP6NL-204ENST00000606752 APBB3O95704 486 aa20.97■□□□□ 0.95
USP6NL-204ENST00000606752 RPN2P04844 631 aa20.97■□□□□ 0.95
USP6NL-204ENST00000606752 SLC35G4P0C7Q5 338 aa20.97■□□□□ 0.95
USP6NL-204ENST00000606752 EZRP15311 586 aaKnown RBP20.97■□□□□ 0.95
USP6NL-204ENST00000606752 IRX1P78414 480 aaPredicted RBP20.97■□□□□ 0.95
USP6NL-204ENST00000606752 CYLC2Q14093 348 aaPredicted RBP20.97■□□□□ 0.95
USP6NL-204ENST00000606752 KIAA0895LQ68EN5 471 aa20.97■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms