RNA–Protein interactions for RNA: ENST00000604516.1

HMGN3-AS1-201, HMGN3 antisense RNA 1, humanhuman

TSL 1 (best) BASIC

Gene HMGN3-AS1, Length 2,946 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-AS1-201ENST00000604516 MSH3P20585 1137 aa11.51□□□□□ -0.57
HMGN3-AS1-201ENST00000604516 CAPGP40121 348 aa11.51□□□□□ -0.57
HMGN3-AS1-201ENST00000604516 MTHFRP42898 656 aa11.51□□□□□ -0.57
HMGN3-AS1-201ENST00000604516 WDR5P61964 334 aaKnown RBP11.51□□□□□ -0.57
HMGN3-AS1-201ENST00000604516 USP39Q53GS9 565 aaKnown RBP11.51□□□□□ -0.57
HMGN3-AS1-201ENST00000604516 REM2Q8IYK8 340 aaPredicted RBP11.51□□□□□ -0.57
HMGN3-AS1-201ENST00000604516 ZNF548Q8NEK5 533 aaPredicted RBP11.51□□□□□ -0.57
HMGN3-AS1-201ENST00000604516 HM13Q8TCT9 377 aa11.51□□□□□ -0.57
HMGN3-AS1-201ENST00000604516 USP7Q93009 1102 aa11.51□□□□□ -0.57
HMGN3-AS1-201ENST00000604516 MUS81Q96NY9 551 aa11.51□□□□□ -0.57
HMGN3-AS1-201ENST00000604516 BBS2Q9BXC9 721 aa11.51□□□□□ -0.57
HMGN3-AS1-201ENST00000604516 SLC32A1Q9H598 525 aa11.51□□□□□ -0.57
HMGN3-AS1-201ENST00000604516 CLMPQ9H6B4 373 aa11.51□□□□□ -0.57
HMGN3-AS1-201ENST00000604516 PARVBQ9HBI1 364 aa11.51□□□□□ -0.57
HMGN3-AS1-201ENST00000604516 RSL24D1Q9UHA3 163 aaKnown RBP11.51□□□□□ -0.57
HMGN3-AS1-201ENST00000604516 HS3ST2Q9Y278 367 aa11.51□□□□□ -0.57
HMGN3-AS1-201ENST00000604516 INVSQ9Y283 1065 aa11.51□□□□□ -0.57
HMGN3-AS1-201ENST00000604516 PCDHGA11Q9Y5H2 935 aa11.51□□□□□ -0.57
HMGN3-AS1-201ENST00000604516 TMEM202A6NGA9 273 aa11.51□□□□□ -0.57
HMGN3-AS1-201ENST00000604516 TMX2-CTNND1H3BSU7 103 aa11.51□□□□□ -0.57
HMGN3-AS1-201ENST00000604516 CLGNO14967 610 aa11.51□□□□□ -0.57
HMGN3-AS1-201ENST00000604516 NOBOXO60393 691 aa11.51□□□□□ -0.57
HMGN3-AS1-201ENST00000604516 SH3BGRLO75368 114 aa11.51□□□□□ -0.57
HMGN3-AS1-201ENST00000604516 CXCL14O95715 111 aa11.51□□□□□ -0.57
HMGN3-AS1-201ENST00000604516 ASLP04424 464 aa11.51□□□□□ -0.57
HMGN3-AS1-201ENST00000604516 AOAHP28039 575 aa11.51□□□□□ -0.57
HMGN3-AS1-201ENST00000604516 ELK4P28324 431 aa11.51□□□□□ -0.57
HMGN3-AS1-201ENST00000604516 SPINT3P49223 89 aa11.51□□□□□ -0.57
HMGN3-AS1-201ENST00000604516 CLCN2P51788 898 aa11.51□□□□□ -0.57
HMGN3-AS1-201ENST00000604516 CHRNB3Q05901 458 aa11.51□□□□□ -0.57
HMGN3-AS1-201ENST00000604516 SF1Q15637 639 aaKnown RBP11.51□□□□□ -0.57
HMGN3-AS1-201ENST00000604516 ADRM1Q16186 407 aa11.51□□□□□ -0.57
HMGN3-AS1-201ENST00000604516 PGS1Q32NB8 556 aa11.51□□□□□ -0.57
HMGN3-AS1-201ENST00000604516 Q6ZVL8 140 aa11.51□□□□□ -0.57
HMGN3-AS1-201ENST00000604516 CLEC4FQ8N1N0 589 aa11.51□□□□□ -0.57
HMGN3-AS1-201ENST00000604516 ZNF366Q8N895 744 aa11.51□□□□□ -0.57
HMGN3-AS1-201ENST00000604516 OR8J3Q8NGG0 315 aa11.51□□□□□ -0.57
HMGN3-AS1-201ENST00000604516 CYB5D2Q8WUJ1 264 aa11.51□□□□□ -0.57
HMGN3-AS1-201ENST00000604516 OSCP1Q8WVF1 389 aa11.51□□□□□ -0.57
HMGN3-AS1-201ENST00000604516 APIPQ96GX9 242 aa11.51□□□□□ -0.57
HMGN3-AS1-201ENST00000604516 ELOVL6Q9H5J4 265 aa11.51□□□□□ -0.57
HMGN3-AS1-201ENST00000604516 SMURF2Q9HAU4 748 aa11.51□□□□□ -0.57
HMGN3-AS1-201ENST00000604516 RDH14Q9HBH5 336 aa11.51□□□□□ -0.57
HMGN3-AS1-201ENST00000604516 EBF1Q9UH73 591 aa11.51□□□□□ -0.57
HMGN3-AS1-201ENST00000604516 TRPS1Q9UHF7 1281 aa11.51□□□□□ -0.57
HMGN3-AS1-201ENST00000604516 CDC14AQ9UNH5 594 aa11.51□□□□□ -0.57
HMGN3-AS1-201ENST00000604516 GMNNO75496 209 aa11.5□□□□□ -0.57
HMGN3-AS1-201ENST00000604516 PRKD3O94806 890 aa11.5□□□□□ -0.57
HMGN3-AS1-201ENST00000604516 PARNO95453 639 aaKnown RBP11.5□□□□□ -0.57
HMGN3-AS1-201ENST00000604516 RAP2AP10114 183 aa11.5□□□□□ -0.57
HMGN3-AS1-201ENST00000604516 MYCLP1P12525 358 aaPredicted RBP11.5□□□□□ -0.57
HMGN3-AS1-201ENST00000604516 CDKN2CP42773 168 aa11.5□□□□□ -0.57
HMGN3-AS1-201ENST00000604516 ARSFP54793 590 aa11.5□□□□□ -0.57
HMGN3-AS1-201ENST00000604516 FAM98BQ52LJ0 330 aaKnown RBP11.5□□□□□ -0.57
HMGN3-AS1-201ENST00000604516 CARD16Q5EG05 197 aa11.5□□□□□ -0.57
HMGN3-AS1-201ENST00000604516 AP1ARQ63HQ0 302 aa11.5□□□□□ -0.57
HMGN3-AS1-201ENST00000604516 TMEM215Q68D42 235 aa11.5□□□□□ -0.57
HMGN3-AS1-201ENST00000604516 BORAQ6PGQ7 559 aa11.5□□□□□ -0.57
HMGN3-AS1-201ENST00000604516 CLVS1Q8IUQ0 354 aaPredicted RBP11.5□□□□□ -0.57
HMGN3-AS1-201ENST00000604516 KREMEN2Q8NCW0 462 aa11.5□□□□□ -0.57
HMGN3-AS1-201ENST00000604516 UBTD2Q8WUN7 234 aa11.5□□□□□ -0.57
HMGN3-AS1-201ENST00000604516 ASB11Q8WXH4 323 aa11.5□□□□□ -0.57
HMGN3-AS1-201ENST00000604516 NCLNQ969V3 563 aa11.5□□□□□ -0.57
HMGN3-AS1-201ENST00000604516 MCCC1Q96RQ3 725 aaPredicted RBP11.5□□□□□ -0.57
HMGN3-AS1-201ENST00000604516 THEGQ9P2T0 379 aa11.5□□□□□ -0.57
HMGN3-AS1-201ENST00000604516 SZT2Q5T011 3432 aa11.5□□□□□ -0.57
HMGN3-AS1-201ENST00000604516 DENND4CQ5VZ89 1909 aa11.5□□□□□ -0.57
HMGN3-AS1-201ENST00000604516 IFRD1O00458 451 aaPredicted RBP11.5□□□□□ -0.57
HMGN3-AS1-201ENST00000604516 POP4O95707 220 aaKnown RBP11.5□□□□□ -0.57
HMGN3-AS1-201ENST00000604516 KRT6AP02538 564 aa11.5□□□□□ -0.57
HMGN3-AS1-201ENST00000604516 KRT6BP04259 564 aa11.5□□□□□ -0.57
HMGN3-AS1-201ENST00000604516 IL6P05231 212 aa11.5□□□□□ -0.57
HMGN3-AS1-201ENST00000604516 OR56A5P0C7T3 313 aa11.5□□□□□ -0.57
HMGN3-AS1-201ENST00000604516 PRKACGP22612 351 aa11.5□□□□□ -0.57
HMGN3-AS1-201ENST00000604516 ETV3P41162 512 aa11.5□□□□□ -0.57
HMGN3-AS1-201ENST00000604516 KRT6CP48668 564 aa11.5□□□□□ -0.57
HMGN3-AS1-201ENST00000604516 ABRAXAS1Q6UWZ7 409 aa11.5□□□□□ -0.57
HMGN3-AS1-201ENST00000604516 HSD11B1LQ7Z5J1 315 aa11.5□□□□□ -0.57
HMGN3-AS1-201ENST00000604516 PATL1Q86TB9 770 aaKnown RBP11.5□□□□□ -0.57
HMGN3-AS1-201ENST00000604516 LILRA3Q8N6C8 439 aaPredicted RBP11.5□□□□□ -0.57
HMGN3-AS1-201ENST00000604516 APOLD1Q96LR9 279 aa11.5□□□□□ -0.57
HMGN3-AS1-201ENST00000604516 EBPLQ9BY08 206 aa11.5□□□□□ -0.57
HMGN3-AS1-201ENST00000604516 TMEM45AQ9NWC5 275 aa11.5□□□□□ -0.57
HMGN3-AS1-201ENST00000604516 ZNF639Q9UID6 485 aa11.5□□□□□ -0.57
HMGN3-AS1-201ENST00000604516 U3KQV3 271 aa11.5□□□□□ -0.57
HMGN3-AS1-201ENST00000604516 PLXNB3Q9ULL4 1909 aa11.5□□□□□ -0.57
HMGN3-AS1-201ENST00000604516 REV3LO60673 3130 aa11.5□□□□□ -0.57
HMGN3-AS1-201ENST00000604516 A0A087WXM4 84 aa11.49□□□□□ -0.57
HMGN3-AS1-201ENST00000604516 ELOVL7A1L3X0 281 aa11.49□□□□□ -0.57
HMGN3-AS1-201ENST00000604516 GRXCR2A6NFK2 248 aa11.49□□□□□ -0.57
HMGN3-AS1-201ENST00000604516 HIDE1A8MVS5 230 aa11.49□□□□□ -0.57
HMGN3-AS1-201ENST00000604516 DEAF1O75398 565 aaPredicted RBP11.49□□□□□ -0.57
HMGN3-AS1-201ENST00000604516 HIST1H2AGP0C0S8 130 aaPredicted RBP11.49□□□□□ -0.57
HMGN3-AS1-201ENST00000604516 ATP1B2P14415 290 aaPredicted RBP11.49□□□□□ -0.57
HMGN3-AS1-201ENST00000604516 HIST1H2ADP20671 130 aa11.49□□□□□ -0.57
HMGN3-AS1-201ENST00000604516 EFNA1P20827 205 aaPredicted RBP11.49□□□□□ -0.57
HMGN3-AS1-201ENST00000604516 RPS14P62263 151 aaKnown RBP11.49□□□□□ -0.57
HMGN3-AS1-201ENST00000604516 TUBA4AP68366 448 aa11.49□□□□□ -0.57
HMGN3-AS1-201ENST00000604516 MAD2L1Q13257 205 aaPredicted RBP11.49□□□□□ -0.57
HMGN3-AS1-201ENST00000604516 PMS2P3Q13401 168 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms