RNA–Protein interactions for RNA: ENST00000602716.5

PPFIA3-207, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 2,020 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-207ENST00000602716 CCDC126Q96EE4 140 aa16.91■□□□□ 0.3
PPFIA3-207ENST00000602716 SCARF2Q96GP6 870 aaPredicted RBP16.91■□□□□ 0.3
PPFIA3-207ENST00000602716 UHRF1Q96T88 793 aaPredicted RBP16.91■□□□□ 0.3
PPFIA3-207ENST00000602716 NRTNQ99748 197 aa16.91■□□□□ 0.3
PPFIA3-207ENST00000602716 SLC12A9Q9BXP2 914 aa16.91■□□□□ 0.3
PPFIA3-207ENST00000602716 CARS2Q9HA77 564 aaKnown RBP16.91■□□□□ 0.3
PPFIA3-207ENST00000602716 ZBTB26Q9HCK0 441 aa16.91■□□□□ 0.3
PPFIA3-207ENST00000602716 NDE1Q9NXR1 346 aa16.91■□□□□ 0.3
PPFIA3-207ENST00000602716 PCTPQ9UKL6 214 aa16.91■□□□□ 0.3
PPFIA3-207ENST00000602716 C17orf113A0A1B0GUU1 675 aa16.9■□□□□ 0.3
PPFIA3-207ENST00000602716 CLGNO14967 610 aa16.9■□□□□ 0.3
PPFIA3-207ENST00000602716 KMOO15229 486 aa16.9■□□□□ 0.3
PPFIA3-207ENST00000602716 NPHS1O60500 1241 aa16.9■□□□□ 0.3
PPFIA3-207ENST00000602716 CCNT2O60583 730 aaKnown RBP16.9■□□□□ 0.3
PPFIA3-207ENST00000602716 SNX2O60749 519 aa16.9■□□□□ 0.3
PPFIA3-207ENST00000602716 FKBP6O75344 327 aa16.9■□□□□ 0.3
PPFIA3-207ENST00000602716 H2AFYO75367 372 aaKnown RBP16.9■□□□□ 0.3
PPFIA3-207ENST00000602716 PSIP1O75475 530 aaKnown RBP16.9■□□□□ 0.3
PPFIA3-207ENST00000602716 VCLP18206 1134 aa16.9■□□□□ 0.3
PPFIA3-207ENST00000602716 RPL10P27635 214 aaKnown RBP16.9■□□□□ 0.3
PPFIA3-207ENST00000602716 GDF5P43026 501 aa16.9■□□□□ 0.3
PPFIA3-207ENST00000602716 HSPA7P48741 367 aa16.9■□□□□ 0.3
PPFIA3-207ENST00000602716 ALG11Q2TAA5 492 aa16.9■□□□□ 0.3
PPFIA3-207ENST00000602716 TJAP1Q5JTD0 557 aa16.9■□□□□ 0.3
PPFIA3-207ENST00000602716 CFAP157Q5JU67 520 aa16.9■□□□□ 0.3
PPFIA3-207ENST00000602716 DUS1LQ6P1R4 473 aaKnown RBP16.9■□□□□ 0.3
PPFIA3-207ENST00000602716 CCL4L1Q8NHW4 92 aa16.9■□□□□ 0.3
PPFIA3-207ENST00000602716 SREK1Q8WXA9 508 aaKnown RBP16.9■□□□□ 0.3
PPFIA3-207ENST00000602716 RHBDF1Q96CC6 855 aa16.9■□□□□ 0.3
PPFIA3-207ENST00000602716 WDR92Q96MX6 357 aa16.9■□□□□ 0.3
PPFIA3-207ENST00000602716 EGFL8Q99944 293 aa16.9■□□□□ 0.3
PPFIA3-207ENST00000602716 OSGEPL1Q9H4B0 414 aa16.9■□□□□ 0.3
PPFIA3-207ENST00000602716 WDR37Q9Y2I8 494 aa16.9■□□□□ 0.3
PPFIA3-207ENST00000602716 GPSM3Q9Y4H4 160 aa16.9■□□□□ 0.3
PPFIA3-207ENST00000602716 CFAP20Q9Y6A4 193 aaKnown RBP16.9■□□□□ 0.3
PPFIA3-207ENST00000602716 PRR19A6NJB7 356 aa16.89■□□□□ 0.29
PPFIA3-207ENST00000602716 NDUFS2O75306 463 aa16.89■□□□□ 0.29
PPFIA3-207ENST00000602716 C8GP07360 202 aa16.89■□□□□ 0.29
PPFIA3-207ENST00000602716 HOXC4P09017 264 aaPredicted RBP16.89■□□□□ 0.29
PPFIA3-207ENST00000602716 TDGF1P13385 188 aa16.89■□□□□ 0.29
PPFIA3-207ENST00000602716 ACADLP28330 430 aa16.89■□□□□ 0.29
PPFIA3-207ENST00000602716 BTKQ06187 659 aa16.89■□□□□ 0.29
PPFIA3-207ENST00000602716 VWA5B1Q5TIE3 1220 aa16.89■□□□□ 0.29
PPFIA3-207ENST00000602716 AAGABQ6PD74 315 aa16.89■□□□□ 0.29
PPFIA3-207ENST00000602716 RD3Q7Z3Z2 195 aa16.89■□□□□ 0.29
PPFIA3-207ENST00000602716 HSPA12BQ96MM6 686 aa16.89■□□□□ 0.29
PPFIA3-207ENST00000602716 ZDHHC5Q9C0B5 715 aa16.89■□□□□ 0.29
PPFIA3-207ENST00000602716 VCXQ9H320 206 aa16.89■□□□□ 0.29
PPFIA3-207ENST00000602716 TCEAL2Q9H3H9 227 aaPredicted RBP16.89■□□□□ 0.29
PPFIA3-207ENST00000602716 PARVBQ9HBI1 364 aa16.89■□□□□ 0.29
PPFIA3-207ENST00000602716 ZDHHC2Q9UIJ5 367 aa16.89■□□□□ 0.29
PPFIA3-207ENST00000602716 PTBP2Q9UKA9 531 aaKnown RBP16.89■□□□□ 0.29
PPFIA3-207ENST00000602716 DMTF1Q9Y222 760 aa16.89■□□□□ 0.29
PPFIA3-207ENST00000602716 EML5Q05BV3 1969 aa16.89■□□□□ 0.29
PPFIA3-207ENST00000602716 A0A0C4DFX4 3053 aa16.89■□□□□ 0.29
PPFIA3-207ENST00000602716 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.89■□□□□ 0.29
PPFIA3-207ENST00000602716 CCDC189A1A4V9 331 aa16.89■□□□□ 0.29
PPFIA3-207ENST00000602716 METTL12A8MUP2 240 aa16.89■□□□□ 0.29
PPFIA3-207ENST00000602716 GPR89AB7ZAQ6 455 aa16.89■□□□□ 0.29
PPFIA3-207ENST00000602716 STX16-NPEPL1H3BU86 382 aa16.89■□□□□ 0.29
PPFIA3-207ENST00000602716 E2F3O00716 465 aa16.89■□□□□ 0.29
PPFIA3-207ENST00000602716 STX16O14662 325 aa16.89■□□□□ 0.29
PPFIA3-207ENST00000602716 WNT1P04628 370 aa16.89■□□□□ 0.29
PPFIA3-207ENST00000602716 JUNP05412 331 aaKnown RBP16.89■□□□□ 0.29
PPFIA3-207ENST00000602716 GPR89BP0CG08 455 aa16.89■□□□□ 0.29
PPFIA3-207ENST00000602716 PRDX3P30048 256 aaKnown RBP16.89■□□□□ 0.29
PPFIA3-207ENST00000602716 RPIAP49247 311 aa16.89■□□□□ 0.29
PPFIA3-207ENST00000602716 FNTBP49356 437 aa16.89■□□□□ 0.29
PPFIA3-207ENST00000602716 ERFP50548 548 aa16.89■□□□□ 0.29
PPFIA3-207ENST00000602716 SRSF5Q13243 272 aaKnown RBP16.89■□□□□ 0.29
PPFIA3-207ENST00000602716 SP140Q13342 867 aa16.89■□□□□ 0.29
PPFIA3-207ENST00000602716 ZNF542PQ5EBM4 170 aa16.89■□□□□ 0.29
PPFIA3-207ENST00000602716 OR52E8Q6IFG1 317 aa16.89■□□□□ 0.29
PPFIA3-207ENST00000602716 PGM2L1Q6PCE3 622 aa16.89■□□□□ 0.29
PPFIA3-207ENST00000602716 ARMCX6Q7L4S7 300 aa16.89■□□□□ 0.29
PPFIA3-207ENST00000602716 TMEFF1Q8IYR6 380 aa16.89■□□□□ 0.29
PPFIA3-207ENST00000602716 MAML2Q8IZL2 1156 aaPredicted RBP16.89■□□□□ 0.29
PPFIA3-207ENST00000602716 DCBLD1Q8N8Z6 715 aa16.89■□□□□ 0.29
PPFIA3-207ENST00000602716 TRPC4APQ8TEL6 797 aa16.89■□□□□ 0.29
PPFIA3-207ENST00000602716 GATA6Q92908 595 aa16.89■□□□□ 0.29
PPFIA3-207ENST00000602716 OR2M4Q96R27 311 aa16.89■□□□□ 0.29
PPFIA3-207ENST00000602716 RDH14Q9HBH5 336 aa16.89■□□□□ 0.29
PPFIA3-207ENST00000602716 GPR27Q9NS67 375 aa16.89■□□□□ 0.29
PPFIA3-207ENST00000602716 ARL15Q9NXU5 204 aa16.89■□□□□ 0.29
PPFIA3-207ENST00000602716 HS3ST3A1Q9Y663 406 aa16.89■□□□□ 0.29
PPFIA3-207ENST00000602716 DNAH14Q0VDD8 3507 aa16.88■□□□□ 0.29
PPFIA3-207ENST00000602716 AK4P27144 223 aaPredicted RBP16.88■□□□□ 0.29
PPFIA3-207ENST00000602716 PDZD3Q86UT5 571 aa16.88■□□□□ 0.29
PPFIA3-207ENST00000602716 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.88■□□□□ 0.29
PPFIA3-207ENST00000602716 TMEM105Q8N8V8 129 aa16.88■□□□□ 0.29
PPFIA3-207ENST00000602716 ACTRT2Q8TDY3 377 aa16.88■□□□□ 0.29
PPFIA3-207ENST00000602716 ZNF483Q8TF39 744 aaPredicted RBP16.88■□□□□ 0.29
PPFIA3-207ENST00000602716 CMTM5Q96DZ9 223 aa16.88■□□□□ 0.29
PPFIA3-207ENST00000602716 TIMM29Q9BSF4 260 aa16.88■□□□□ 0.29
PPFIA3-207ENST00000602716 YIPF3Q9GZM5 350 aa16.88■□□□□ 0.29
PPFIA3-207ENST00000602716 S100A14Q9HCY8 104 aa16.88■□□□□ 0.29
PPFIA3-207ENST00000602716 SEMA4BQ9NPR2 832 aaPredicted RBP16.88■□□□□ 0.29
PPFIA3-207ENST00000602716 PRMT8Q9NR22 394 aaPredicted RBP16.88■□□□□ 0.29
PPFIA3-207ENST00000602716 WWOXQ9NZC7 414 aa16.88■□□□□ 0.29
PPFIA3-207ENST00000602716 KLQ9UEF7 1012 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms