RNA–Protein interactions for RNA: ENST00000600718.5

SHKBP1-224, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-224ENST00000600718 WDR92Q96MX6 357 aa17.19■□□□□ 0.34
SHKBP1-224ENST00000600718 CDK15Q96Q40 435 aa17.19■□□□□ 0.34
SHKBP1-224ENST00000600718 TUBB1Q9H4B7 451 aa17.19■□□□□ 0.34
SHKBP1-224ENST00000600718 MRGBPQ9NV56 204 aa17.19■□□□□ 0.34
SHKBP1-224ENST00000600718 DNAJC11Q9NVH1 559 aa17.19■□□□□ 0.34
SHKBP1-224ENST00000600718 GPSM3Q9Y4H4 160 aa17.19■□□□□ 0.34
SHKBP1-224ENST00000600718 PRR5-ARHGAP8B1AHC4 643 aa17.18■□□□□ 0.34
SHKBP1-224ENST00000600718 TNFRSF10CO14798 259 aa17.18■□□□□ 0.34
SHKBP1-224ENST00000600718 PIP5K1BO14986 540 aa17.18■□□□□ 0.34
SHKBP1-224ENST00000600718 CBX6O95503 412 aa17.18■□□□□ 0.34
SHKBP1-224ENST00000600718 RPN2P04844 631 aa17.18■□□□□ 0.34
SHKBP1-224ENST00000600718 ACP5P13686 325 aa17.18■□□□□ 0.34
SHKBP1-224ENST00000600718 ADSLP30566 484 aaPredicted RBP17.18■□□□□ 0.34
SHKBP1-224ENST00000600718 RPS9P46781 194 aaKnown RBP17.18■□□□□ 0.34
SHKBP1-224ENST00000600718 RASSF2P50749 326 aa17.18■□□□□ 0.34
SHKBP1-224ENST00000600718 NCALDP61601 193 aa17.18■□□□□ 0.34
SHKBP1-224ENST00000600718 GCNT7Q6ZNI0 430 aa17.18■□□□□ 0.34
SHKBP1-224ENST00000600718 LARP4Q71RC2 724 aaKnown RBP eCLIP17.18■□□□□ 0.34
SHKBP1-224ENST00000600718 TREML1Q86YW5 311 aa17.18■□□□□ 0.34
SHKBP1-224ENST00000600718 DDIASQ8IXT1 998 aa17.18■□□□□ 0.34
SHKBP1-224ENST00000600718 TMEM145Q8NBT3 493 aa17.18■□□□□ 0.34
SHKBP1-224ENST00000600718 PJA1Q8NG27 643 aa17.18■□□□□ 0.34
SHKBP1-224ENST00000600718 GPR174Q9BXC1 333 aa17.18■□□□□ 0.34
SHKBP1-224ENST00000600718 ATG10Q9H0Y0 220 aa17.18■□□□□ 0.34
SHKBP1-224ENST00000600718 EBF2Q9HAK2 575 aa17.18■□□□□ 0.34
SHKBP1-224ENST00000600718 MRPL40Q9NQ50 206 aaKnown RBP17.18■□□□□ 0.34
SHKBP1-224ENST00000600718 TRPS1Q9UHF7 1281 aa17.18■□□□□ 0.34
SHKBP1-224ENST00000600718 ASF1AQ9Y294 204 aa17.18■□□□□ 0.34
SHKBP1-224ENST00000600718 CA5BQ9Y2D0 317 aa17.18■□□□□ 0.34
SHKBP1-224ENST00000600718 PRSS38A1L453 326 aa17.17■□□□□ 0.34
SHKBP1-224ENST00000600718 SLC22A2O15244 555 aa17.17■□□□□ 0.34
SHKBP1-224ENST00000600718 SLC16A8O95907 504 aa17.17■□□□□ 0.34
SHKBP1-224ENST00000600718 CAPN1P07384 714 aa17.17■□□□□ 0.34
SHKBP1-224ENST00000600718 CALB2P22676 271 aa17.17■□□□□ 0.34
SHKBP1-224ENST00000600718 GNPDA1P46926 289 aa17.17■□□□□ 0.34
SHKBP1-224ENST00000600718 CAPRIN2Q6IMN6 1127 aaKnown RBP17.17■□□□□ 0.34
SHKBP1-224ENST00000600718 ENPP7Q6UWV6 458 aa17.17■□□□□ 0.34
SHKBP1-224ENST00000600718 SPDYE1Q8NFV5 336 aaPredicted RBP17.17■□□□□ 0.34
SHKBP1-224ENST00000600718 OR56A3Q8NH54 315 aa17.17■□□□□ 0.34
SHKBP1-224ENST00000600718 PYCR2Q96C36 320 aa17.17■□□□□ 0.34
SHKBP1-224ENST00000600718 PTCD3Q96EY7 689 aaKnown RBP17.17■□□□□ 0.34
SHKBP1-224ENST00000600718 C3orf30Q96M34 536 aa17.17■□□□□ 0.34
SHKBP1-224ENST00000600718 FGF22Q9HCT0 170 aa17.17■□□□□ 0.34
SHKBP1-224ENST00000600718 SLC22A14Q9Y267 594 aa17.17■□□□□ 0.34
SHKBP1-224ENST00000600718 NUMA1Q14980 2115 aa17.17■□□□□ 0.34
SHKBP1-224ENST00000600718 IGHV1OR15-9A0A0B4J2B8 117 aa17.17■□□□□ 0.34
SHKBP1-224ENST00000600718 KRT87PA6NCN2 255 aa17.17■□□□□ 0.34
SHKBP1-224ENST00000600718 H0Y8X5 98 aa17.17■□□□□ 0.34
SHKBP1-224ENST00000600718 DCXO43602 365 aa17.17■□□□□ 0.34
SHKBP1-224ENST00000600718 CLDN9O95484 217 aa17.17■□□□□ 0.34
SHKBP1-224ENST00000600718 SLC35G4P0C7Q5 338 aa17.17■□□□□ 0.34
SHKBP1-224ENST00000600718 LINC00032P0C843 101 aa17.17■□□□□ 0.34
SHKBP1-224ENST00000600718 ESRRAP11474 423 aaPredicted RBP17.17■□□□□ 0.34
SHKBP1-224ENST00000600718 EPORP19235 508 aa17.17■□□□□ 0.34
SHKBP1-224ENST00000600718 IMPA1P29218 277 aa17.17■□□□□ 0.34
SHKBP1-224ENST00000600718 HMOX2P30519 316 aa17.17■□□□□ 0.34
SHKBP1-224ENST00000600718 NAE1Q13564 534 aa17.17■□□□□ 0.34
SHKBP1-224ENST00000600718 SNCBQ16143 134 aa17.17■□□□□ 0.34
SHKBP1-224ENST00000600718 CHSY3Q70JA7 882 aa17.17■□□□□ 0.34
SHKBP1-224ENST00000600718 ABI3BPQ7Z7G0 1075 aa17.17■□□□□ 0.34
SHKBP1-224ENST00000600718 THOC6Q86W42 341 aaKnown RBP17.17■□□□□ 0.34
SHKBP1-224ENST00000600718 CAMKK1Q8N5S9 505 aa17.17■□□□□ 0.34
SHKBP1-224ENST00000600718 RAD51AP1Q96B01 352 aa17.17■□□□□ 0.34
SHKBP1-224ENST00000600718 BIRC7Q96CA5 298 aa17.17■□□□□ 0.34
SHKBP1-224ENST00000600718 MAGEB10Q96LZ2 347 aaPredicted RBP17.17■□□□□ 0.34
SHKBP1-224ENST00000600718 TPSD1Q9BZJ3 242 aa17.17■□□□□ 0.34
SHKBP1-224ENST00000600718 ZNF385DQ9H6B1 395 aa17.17■□□□□ 0.34
SHKBP1-224ENST00000600718 TAGLN3Q9UI15 199 aa17.17■□□□□ 0.34
SHKBP1-224ENST00000600718 LNPEPQ9UIQ6 1025 aa17.17■□□□□ 0.34
SHKBP1-224ENST00000600718 PSMD13Q9UNM6 376 aa17.17■□□□□ 0.34
SHKBP1-224ENST00000600718 BTRCQ9Y297 605 aa17.17■□□□□ 0.34
SHKBP1-224ENST00000600718 DOCK9Q9BZ29 2069 aa17.16■□□□□ 0.34
SHKBP1-224ENST00000600718 PRR19A6NJB7 356 aa17.16■□□□□ 0.34
SHKBP1-224ENST00000600718 DNAJC8O75937 253 aaPredicted RBP17.16■□□□□ 0.34
SHKBP1-224ENST00000600718 IDSP22304 550 aa17.16■□□□□ 0.34
SHKBP1-224ENST00000600718 RABIFP47224 123 aa17.16■□□□□ 0.34
SHKBP1-224ENST00000600718 CLCNKAP51800 687 aa17.16■□□□□ 0.34
SHKBP1-224ENST00000600718 DCUN1D3Q8IWE4 304 aa17.16■□□□□ 0.34
SHKBP1-224ENST00000600718 PARP9Q8IXQ6 854 aa17.16■□□□□ 0.34
SHKBP1-224ENST00000600718 DCBLD1Q8N8Z6 715 aa17.16■□□□□ 0.34
SHKBP1-224ENST00000600718 OR1E3Q8WZA6 343 aa17.16■□□□□ 0.34
SHKBP1-224ENST00000600718 OR2M4Q96R27 311 aa17.16■□□□□ 0.34
SHKBP1-224ENST00000600718 SLC29A3Q9BZD2 475 aa17.16■□□□□ 0.34
SHKBP1-224ENST00000600718 AKTIPQ9H8T0 292 aa17.16■□□□□ 0.34
SHKBP1-224ENST00000600718 ACTR8Q9H981 624 aa17.16■□□□□ 0.34
SHKBP1-224ENST00000600718 CARS2Q9HA77 564 aaKnown RBP17.16■□□□□ 0.34
SHKBP1-224ENST00000600718 ATP6AP2A0A1C7CYW4 349 aa17.15■□□□□ 0.34
SHKBP1-224ENST00000600718 UBDO15205 165 aa17.15■□□□□ 0.34
SHKBP1-224ENST00000600718 ATP6AP2O75787 350 aa17.15■□□□□ 0.34
SHKBP1-224ENST00000600718 ITPKAP23677 461 aa17.15■□□□□ 0.34
SHKBP1-224ENST00000600718 THOP1P52888 689 aa17.15■□□□□ 0.34
SHKBP1-224ENST00000600718 KLF10Q13118 480 aa17.15■□□□□ 0.34
SHKBP1-224ENST00000600718 FAM219BQ5XKK7 198 aa17.15■□□□□ 0.34
SHKBP1-224ENST00000600718 TMEM198Q66K66 360 aa17.15■□□□□ 0.34
SHKBP1-224ENST00000600718 RNF165Q6ZSG1 346 aa17.15■□□□□ 0.34
SHKBP1-224ENST00000600718 Q6ZSR6 202 aa17.15■□□□□ 0.34
SHKBP1-224ENST00000600718 PHC3Q8NDX5 983 aa17.15■□□□□ 0.34
SHKBP1-224ENST00000600718 ZNF480Q8WV37 535 aa17.15■□□□□ 0.34
SHKBP1-224ENST00000600718 RLN3Q8WXF3 142 aa17.15■□□□□ 0.34
SHKBP1-224ENST00000600718 CATSPER2Q96P56 530 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms