RNA–Protein interactions for RNA: ENST00000599699.2

SSBP4-206, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene SSBP4, Length 793 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-206ENST00000599699 FASTKD3Q14CZ7 662 aaKnown RBP27.28■■□□□ 1.96
SSBP4-206ENST00000599699 ARHGAP40Q5TG30 622 aa27.28■■□□□ 1.96
SSBP4-206ENST00000599699 STEAP4Q687X5 459 aa27.28■■□□□ 1.96
SSBP4-206ENST00000599699 ZBED8Q8IZ13 594 aa27.28■■□□□ 1.96
SSBP4-206ENST00000599699 C2orf73Q8N5S3 287 aaPredicted RBP27.28■■□□□ 1.96
SSBP4-206ENST00000599699 NKD1Q969G9 470 aa27.28■■□□□ 1.96
SSBP4-206ENST00000599699 RAD51AP1Q96B01 352 aa27.28■■□□□ 1.96
SSBP4-206ENST00000599699 IL17FQ96PD4 163 aa27.28■■□□□ 1.96
SSBP4-206ENST00000599699 AARSD1Q9BTE6 412 aaKnown RBP27.28■■□□□ 1.96
SSBP4-206ENST00000599699 PRORYQ9H606 182 aa27.28■■□□□ 1.96
SSBP4-206ENST00000599699 PLAC1Q9HBJ0 212 aa27.28■■□□□ 1.96
SSBP4-206ENST00000599699 FGF21Q9NSA1 209 aa27.28■■□□□ 1.96
SSBP4-206ENST00000599699 PILRAQ9UKJ1 303 aa27.28■■□□□ 1.96
SSBP4-206ENST00000599699 VPS26AO75436 327 aa27.27■■□□□ 1.96
SSBP4-206ENST00000599699 PVRP15151 417 aa27.27■■□□□ 1.96
SSBP4-206ENST00000599699 ST6GAL1P15907 406 aa27.27■■□□□ 1.96
SSBP4-206ENST00000599699 CCNFP41002 786 aa27.27■■□□□ 1.96
SSBP4-206ENST00000599699 VAC14Q08AM6 782 aa27.27■■□□□ 1.96
SSBP4-206ENST00000599699 CUL1Q13616 776 aa27.27■■□□□ 1.96
SSBP4-206ENST00000599699 GPR19Q15760 415 aa27.27■■□□□ 1.96
SSBP4-206ENST00000599699 KLHL38Q2WGJ6 581 aa27.27■■□□□ 1.96
SSBP4-206ENST00000599699 TRMT10BQ6PF06 316 aaKnown RBP27.27■■□□□ 1.96
SSBP4-206ENST00000599699 KIAA0408Q6ZU52 694 aa27.27■■□□□ 1.96
SSBP4-206ENST00000599699 TRIM73Q86UV7 250 aa27.27■■□□□ 1.96
SSBP4-206ENST00000599699 CNTN4Q8IWV2 1026 aa27.27■■□□□ 1.96
SSBP4-206ENST00000599699 NLGN4XQ8N0W4 816 aa27.27■■□□□ 1.96
SSBP4-206ENST00000599699 RAB42Q8N4Z0 105 aa27.27■■□□□ 1.96
SSBP4-206ENST00000599699 NLGN4YQ8NFZ3 816 aaPredicted RBP27.27■■□□□ 1.96
SSBP4-206ENST00000599699 MAGEC3Q8TD91 643 aa27.27■■□□□ 1.96
SSBP4-206ENST00000599699 OR2A14Q96R47 310 aa27.27■■□□□ 1.96
SSBP4-206ENST00000599699 NDNQ99608 321 aa27.27■■□□□ 1.96
SSBP4-206ENST00000599699 GPR21Q99679 349 aa27.27■■□□□ 1.96
SSBP4-206ENST00000599699 SLC30A3Q99726 388 aa27.27■■□□□ 1.96
SSBP4-206ENST00000599699 PITPNM3Q9BZ71 974 aa27.27■■□□□ 1.96
SSBP4-206ENST00000599699 KLHL42Q9P2K6 505 aa27.27■■□□□ 1.96
SSBP4-206ENST00000599699 SLC17A6Q9P2U8 582 aa27.27■■□□□ 1.96
SSBP4-206ENST00000599699 LNPEPQ9UIQ6 1025 aa27.27■■□□□ 1.96
SSBP4-206ENST00000599699 BTRCQ9Y297 605 aa27.27■■□□□ 1.96
SSBP4-206ENST00000599699 SSUH2Q9Y2M2 353 aa27.27■■□□□ 1.96
SSBP4-206ENST00000599699 E7ESA3 106 aa27.26■■□□□ 1.95
SSBP4-206ENST00000599699 KIF2AO00139 706 aaPredicted RBP27.26■■□□□ 1.95
SSBP4-206ENST00000599699 SPAG6O75602 509 aa27.26■■□□□ 1.95
SSBP4-206ENST00000599699 TUBB4AP04350 444 aa27.26■■□□□ 1.95
SSBP4-206ENST00000599699 TUBB4BP68371 445 aa27.26■■□□□ 1.95
SSBP4-206ENST00000599699 SRSF6Q13247 344 aaKnown RBP27.26■■□□□ 1.95
SSBP4-206ENST00000599699 TUBB2AQ13885 445 aa27.26■■□□□ 1.95
SSBP4-206ENST00000599699 KIR2DS3Q14952 304 aa27.26■■□□□ 1.95
SSBP4-206ENST00000599699 LARP7Q4G0J3 582 aaKnown RBP eCLIP27.26■■□□□ 1.95
SSBP4-206ENST00000599699 TEDDM1Q5T9Z0 273 aa27.26■■□□□ 1.95
SSBP4-206ENST00000599699 C8orf74Q6P047 294 aa27.26■■□□□ 1.95
SSBP4-206ENST00000599699 GPR155Q7Z3F1 870 aa27.26■■□□□ 1.95
SSBP4-206ENST00000599699 TAX1BP1Q86VP1 789 aa27.26■■□□□ 1.95
SSBP4-206ENST00000599699 GIMAP7Q8NHV1 300 aa27.26■■□□□ 1.95
SSBP4-206ENST00000599699 INPP5DQ92835 1189 aa27.26■■□□□ 1.95
SSBP4-206ENST00000599699 TRAPPC9Q96Q05 1148 aa27.26■■□□□ 1.95
SSBP4-206ENST00000599699 TUBB2BQ9BVA1 445 aa27.26■■□□□ 1.95
SSBP4-206ENST00000599699 RAB11FIP5Q9BXF6 653 aa27.26■■□□□ 1.95
SSBP4-206ENST00000599699 FANCEQ9HB96 536 aa27.26■■□□□ 1.95
SSBP4-206ENST00000599699 SAYSD1Q9NPB0 183 aa27.26■■□□□ 1.95
SSBP4-206ENST00000599699 GRHL1Q9NZI5 618 aa27.26■■□□□ 1.95
SSBP4-206ENST00000599699 DHRS7Q9Y394 339 aa27.26■■□□□ 1.95
SSBP4-206ENST00000599699 TMEM184BQ9Y519 407 aaPredicted RBP27.26■■□□□ 1.95
SSBP4-206ENST00000599699 SDK2Q58EX2 2172 aa27.26■■□□□ 1.95
SSBP4-206ENST00000599699 PTPRQQ9UMZ3 2332 aa27.25■■□□□ 1.95
SSBP4-206ENST00000599699 CHD6Q8TD26 2715 aa27.25■■□□□ 1.95
SSBP4-206ENST00000599699 RASGRF2O14827 1237 aa27.25■■□□□ 1.95
SSBP4-206ENST00000599699 KIAA0754O94854 1291 aa27.25■■□□□ 1.95
SSBP4-206ENST00000599699 MATN4O95460 622 aa27.25■■□□□ 1.95
SSBP4-206ENST00000599699 AHSGP02765 367 aa27.25■■□□□ 1.95
SSBP4-206ENST00000599699 CD9P21926 228 aa27.25■■□□□ 1.95
SSBP4-206ENST00000599699 MAP4P27816 1152 aaKnown RBP27.25■■□□□ 1.95
SSBP4-206ENST00000599699 PLTPP55058 493 aa27.25■■□□□ 1.95
SSBP4-206ENST00000599699 GRB7Q14451 532 aa27.25■■□□□ 1.95
SSBP4-206ENST00000599699 BPHLQ86WA6 291 aaPredicted RBP27.25■■□□□ 1.95
SSBP4-206ENST00000599699 LMNTD1Q8N9Z9 388 aa27.25■■□□□ 1.95
SSBP4-206ENST00000599699 PYROXD1Q8WU10 500 aa27.25■■□□□ 1.95
SSBP4-206ENST00000599699 SPRY4Q9C004 299 aa27.25■■□□□ 1.95
SSBP4-206ENST00000599699 TRMT6Q9UJA5 497 aaKnown RBP27.25■■□□□ 1.95
SSBP4-206ENST00000599699 RALYQ9UKM9 306 aaKnown RBP27.25■■□□□ 1.95
SSBP4-206ENST00000599699 MED16Q9Y2X0 877 aa27.25■■□□□ 1.95
SSBP4-206ENST00000599699 TEX51A0A1B0GUA7 166 aa27.24■■□□□ 1.95
SSBP4-206ENST00000599699 ZNF28P17035 718 aa27.24■■□□□ 1.95
SSBP4-206ENST00000599699 GABRB3P28472 473 aa27.24■■□□□ 1.95
SSBP4-206ENST00000599699 CAV1Q03135 178 aa27.24■■□□□ 1.95
SSBP4-206ENST00000599699 CCSMST1Q4G0I0 132 aa27.24■■□□□ 1.95
SSBP4-206ENST00000599699 UGT3A1Q6NUS8 523 aa27.24■■□□□ 1.95
SSBP4-206ENST00000599699 CAPN12Q6ZSI9 719 aa27.24■■□□□ 1.95
SSBP4-206ENST00000599699 TIPARPQ7Z3E1 657 aaKnown RBP27.24■■□□□ 1.95
SSBP4-206ENST00000599699 LINC01555Q8NAE3 123 aa27.24■■□□□ 1.95
SSBP4-206ENST00000599699 OR2L8Q8NGY9 312 aa27.24■■□□□ 1.95
SSBP4-206ENST00000599699 CD200R1Q8TD46 325 aa27.24■■□□□ 1.95
SSBP4-206ENST00000599699 FAM114A2Q9NRY5 505 aa27.24■■□□□ 1.95
SSBP4-206ENST00000599699 ZFATQ9P243 1243 aa27.24■■□□□ 1.95
SSBP4-206ENST00000599699 NBEAQ8NFP9 2946 aa27.23■■□□□ 1.95
SSBP4-206ENST00000599699 A0A0J9YY10 115 aa27.23■■□□□ 1.95
SSBP4-206ENST00000599699 DLGAP3O95886 979 aa27.23■■□□□ 1.95
SSBP4-206ENST00000599699 CATP04040 527 aaKnown RBP27.23■■□□□ 1.95
SSBP4-206ENST00000599699 ENO3P13929 434 aaPredicted RBP27.23■■□□□ 1.95
SSBP4-206ENST00000599699 SLC7A5Q01650 507 aa27.23■■□□□ 1.95
SSBP4-206ENST00000599699 MGAT5Q09328 741 aa27.23■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms