RNA–Protein interactions for RNA: ENST00000598808.5

IRF3-221, Transcript of interferon regulatory factor 3, human

TSL 5 BASIC

Gene IRF3, Length 1,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
IRF3-221	ENST00000598808	SLC39A10	Q9ULF5	831 aa		19.54	■□□□□ 0.72
IRF3-221	ENST00000598808	UNC13C	Q8NB66	2214 aa		19.54	■□□□□ 0.72
IRF3-221	ENST00000598808	CHD8	Q9HCK8	2581 aa		19.54	■□□□□ 0.72
IRF3-221	ENST00000598808	GSAP	A4D1B5	854 aa		19.54	■□□□□ 0.72
IRF3-221	ENST00000598808	RASSF9	O75901	435 aa		19.54	■□□□□ 0.72
IRF3-221	ENST00000598808	INHBA	P08476	426 aa		19.54	■□□□□ 0.72
IRF3-221	ENST00000598808	HOXB3	P14651	431 aa	Predicted RBP	19.54	■□□□□ 0.72
IRF3-221	ENST00000598808	FDXR	P22570	491 aa		19.54	■□□□□ 0.72
IRF3-221	ENST00000598808	SKIV2L2	P42285	1042 aa	Known RBP	19.54	■□□□□ 0.72
IRF3-221	ENST00000598808	GFER	P55789	205 aa		19.54	■□□□□ 0.72
IRF3-221	ENST00000598808	SHC2	P98077	582 aa		19.54	■□□□□ 0.72
IRF3-221	ENST00000598808	PRKAA1	Q13131	559 aa		19.54	■□□□□ 0.72
IRF3-221	ENST00000598808	PAQR3	Q6TCH7	311 aa		19.54	■□□□□ 0.72
IRF3-221	ENST00000598808	PLXDC1	Q8IUK5	500 aa		19.54	■□□□□ 0.72
IRF3-221	ENST00000598808	RCBTB1	Q8NDN9	531 aa		19.54	■□□□□ 0.72
IRF3-221	ENST00000598808	ZFPM2	Q8WW38	1151 aa		19.54	■□□□□ 0.72
IRF3-221	ENST00000598808	LINGO1	Q96FE5	620 aa		19.54	■□□□□ 0.72
IRF3-221	ENST00000598808	CCDC74B	Q96LY2	380 aa		19.54	■□□□□ 0.72
IRF3-221	ENST00000598808	RBBP8	Q99708	897 aa		19.54	■□□□□ 0.72
IRF3-221	ENST00000598808	DPYSL5	Q9BPU6	564 aa		19.54	■□□□□ 0.72
IRF3-221	ENST00000598808	SELENOS	Q9BQE4	189 aa		19.54	■□□□□ 0.72
IRF3-221	ENST00000598808	EPN3	Q9H201	632 aa		19.54	■□□□□ 0.72
IRF3-221	ENST00000598808	CCDC134	Q9H6E4	229 aa		19.54	■□□□□ 0.72
IRF3-221	ENST00000598808	HRASLS2	Q9NWW9	162 aa		19.54	■□□□□ 0.72
IRF3-221	ENST00000598808	CEP295	Q9C0D2	2601 aa		19.53	■□□□□ 0.72
IRF3-221	ENST00000598808	ASPM	Q8IZT6	3477 aa		19.53	■□□□□ 0.72
IRF3-221	ENST00000598808	CAPN5	O15484	640 aa	Predicted RBP	19.53	■□□□□ 0.72
IRF3-221	ENST00000598808	PRPF4	O43172	522 aa	Known RBP eCLIP	19.53	■□□□□ 0.72	9e-7	■■□□□ 13.2
IRF3-221	ENST00000598808	CBSL	P0DN79	551 aa		19.53	■□□□□ 0.72
IRF3-221	ENST00000598808	ENO3	P13929	434 aa	Predicted RBP	19.53	■□□□□ 0.72
IRF3-221	ENST00000598808	KRT15	P19012	456 aa		19.53	■□□□□ 0.72
IRF3-221	ENST00000598808	POLR2C	P19387	275 aa	Predicted RBP	19.53	■□□□□ 0.72
IRF3-221	ENST00000598808	CNTF	P26441	200 aa		19.53	■□□□□ 0.72
IRF3-221	ENST00000598808	SPR	P35270	261 aa	Predicted RBP	19.53	■□□□□ 0.72
IRF3-221	ENST00000598808	CBS	P35520	551 aa		19.53	■□□□□ 0.72
IRF3-221	ENST00000598808	SERPINB9	P50453	376 aa		19.53	■□□□□ 0.72
IRF3-221	ENST00000598808	PDX1	P52945	283 aa		19.53	■□□□□ 0.72
IRF3-221	ENST00000598808	GUCY1A3	Q02108	690 aa		19.53	■□□□□ 0.72
IRF3-221	ENST00000598808	ZNF460	Q14592	562 aa		19.53	■□□□□ 0.72
IRF3-221	ENST00000598808	USP10	Q14694	798 aa	Known RBP	19.53	■□□□□ 0.72
IRF3-221	ENST00000598808	C3orf38	Q5JPI3	329 aa		19.53	■□□□□ 0.72
IRF3-221	ENST00000598808	GRTP1	Q5TC63	336 aa		19.53	■□□□□ 0.72
IRF3-221	ENST00000598808	FAM92B	Q6ZTR7	304 aa		19.53	■□□□□ 0.72
IRF3-221	ENST00000598808	MYO1H	Q8N1T3	1032 aa		19.53	■□□□□ 0.72
IRF3-221	ENST00000598808	OR4D9	Q8NGE8	314 aa		19.53	■□□□□ 0.72
IRF3-221	ENST00000598808	DCAKD	Q8WVC6	231 aa		19.53	■□□□□ 0.72
IRF3-221	ENST00000598808	MTBP	Q96DY7	904 aa		19.53	■□□□□ 0.72
IRF3-221	ENST00000598808	SMC6	Q96SB8	1091 aa		19.53	■□□□□ 0.72
IRF3-221	ENST00000598808	NRTN	Q99748	197 aa		19.53	■□□□□ 0.72
IRF3-221	ENST00000598808	CAB39L	Q9H9S4	337 aa		19.53	■□□□□ 0.72
IRF3-221	ENST00000598808	INTS9	Q9NV88	658 aa	Known RBP	19.53	■□□□□ 0.72
IRF3-221	ENST00000598808	AKAP7	Q9P0M2	348 aa	Predicted RBP	19.53	■□□□□ 0.72
IRF3-221	ENST00000598808	KLHL42	Q9P2K6	505 aa		19.53	■□□□□ 0.72
IRF3-221	ENST00000598808	CTNNAL1	Q9UBT7	734 aa		19.53	■□□□□ 0.72
IRF3-221	ENST00000598808	MTO1	Q9Y2Z2	717 aa	Known RBP	19.53	■□□□□ 0.72
IRF3-221	ENST00000598808	NEUROG3	Q9Y4Z2	214 aa		19.53	■□□□□ 0.72
IRF3-221	ENST00000598808	TPR	P12270	2363 aa	Known RBP	19.52	■□□□□ 0.72
IRF3-221	ENST00000598808	CAT	P04040	527 aa	Known RBP	19.52	■□□□□ 0.72
IRF3-221	ENST00000598808	MAP4	P27816	1152 aa	Known RBP	19.52	■□□□□ 0.72
IRF3-221	ENST00000598808	SHMT2	P34897	504 aa		19.52	■□□□□ 0.72
IRF3-221	ENST00000598808	GBX1	Q14549	363 aa		19.52	■□□□□ 0.72
IRF3-221	ENST00000598808	CLPP	Q16740	277 aa	Predicted RBP	19.52	■□□□□ 0.72
IRF3-221	ENST00000598808	TMEM71	Q6P5X7	295 aa		19.52	■□□□□ 0.72
IRF3-221	ENST00000598808	ZNF771	Q7L3S4	317 aa	Predicted RBP	19.52	■□□□□ 0.72
IRF3-221	ENST00000598808	TAX1BP1	Q86VP1	789 aa		19.52	■□□□□ 0.72
IRF3-221	ENST00000598808	AMIGO1	Q86WK6	493 aa		19.52	■□□□□ 0.72
IRF3-221	ENST00000598808	RAB42	Q8N4Z0	105 aa		19.52	■□□□□ 0.72
IRF3-221	ENST00000598808	EEF1AKMT1	Q8WVE0	214 aa		19.52	■□□□□ 0.72
IRF3-221	ENST00000598808	NKIRAS1	Q9NYS0	192 aa		19.52	■□□□□ 0.72
IRF3-221	ENST00000598808	TBK1	Q9UHD2	729 aa		19.52	■□□□□ 0.72
IRF3-221	ENST00000598808	ICK	Q9UPZ9	632 aa		19.52	■□□□□ 0.72
IRF3-221	ENST00000598808	ENTPD2	Q9Y5L3	495 aa		19.52	■□□□□ 0.72
IRF3-221	ENST00000598808	ACACB	O00763	2458 aa		19.52	■□□□□ 0.71
IRF3-221	ENST00000598808	WDFY3	Q8IZQ1	3526 aa		19.51	■□□□□ 0.71
IRF3-221	ENST00000598808	IGHV5-10-1	A0A0J9YXX1	117 aa		19.51	■□□□□ 0.71
IRF3-221	ENST00000598808	PABPN1L	A6NDY0	278 aa	Known RBP	19.51	■□□□□ 0.71
IRF3-221	ENST00000598808	OR5K3	A6NET4	321 aa		19.51	■□□□□ 0.71
IRF3-221	ENST00000598808	TMX2-CTNND1	H3BSU7	103 aa		19.51	■□□□□ 0.71
IRF3-221	ENST00000598808	KRT37	O76014	449 aa		19.51	■□□□□ 0.71
IRF3-221	ENST00000598808	MPC1L	P0DKB6	136 aa		19.51	■□□□□ 0.71
IRF3-221	ENST00000598808	CHN1	P15882	459 aa		19.51	■□□□□ 0.71
IRF3-221	ENST00000598808	CCNF	P41002	786 aa		19.51	■□□□□ 0.71
IRF3-221	ENST00000598808	LIMK2	P53671	638 aa		19.51	■□□□□ 0.71
IRF3-221	ENST00000598808	TAS2R39	P59534	338 aa		19.51	■□□□□ 0.71
IRF3-221	ENST00000598808	IL2	P60568	153 aa		19.51	■□□□□ 0.71
IRF3-221	ENST00000598808	PPP1CA	P62136	330 aa		19.51	■□□□□ 0.71
IRF3-221	ENST00000598808	TIAL1	Q01085	375 aa	Known RBP eCLIP	19.51	■□□□□ 0.71
IRF3-221	ENST00000598808	CFHR1	Q03591	330 aa		19.51	■□□□□ 0.71
IRF3-221	ENST00000598808	ILF2	Q12905	390 aa	Known RBP	19.51	■□□□□ 0.71
IRF3-221	ENST00000598808	LRRC8E	Q6NSJ5	796 aa		19.51	■□□□□ 0.71
IRF3-221	ENST00000598808	WDR74	Q6RFH5	385 aa	Predicted RBP	19.51	■□□□□ 0.71
IRF3-221	ENST00000598808	SRRM1	Q8IYB3	904 aa	Known RBP	19.51	■□□□□ 0.71
IRF3-221	ENST00000598808	CYP4X1	Q8N118	509 aa		19.51	■□□□□ 0.71
IRF3-221	ENST00000598808	MAGEC3	Q8TD91	643 aa		19.51	■□□□□ 0.71
IRF3-221	ENST00000598808	TSPAN17	Q96FV3	270 aa		19.51	■□□□□ 0.71
IRF3-221	ENST00000598808	ZDHHC12	Q96GR4	267 aa		19.51	■□□□□ 0.71
IRF3-221	ENST00000598808	AKAP13	Q12802	2813 aa		19.5	■□□□□ 0.71
IRF3-221	ENST00000598808	TMEM120B	A0PK00	339 aa		19.5	■□□□□ 0.71
IRF3-221	ENST00000598808	KRT87P	A6NCN2	255 aa		19.5	■□□□□ 0.71
IRF3-221	ENST00000598808	KRT38	O76015	456 aa		19.5	■□□□□ 0.71

Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms