RNA–Protein interactions for RNA: ENST00000596938.1

CCDC9-203, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 457 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-203ENST00000596938 FMO4P31512 558 aa10.16□□□□□ -0.78
CCDC9-203ENST00000596938 RORAP35398 523 aa10.16□□□□□ -0.78
CCDC9-203ENST00000596938 MAGEA3P43357 314 aa10.16□□□□□ -0.78
CCDC9-203ENST00000596938 ITGA1P56199 1179 aa10.16□□□□□ -0.78
CCDC9-203ENST00000596938 RPS15P62841 145 aaKnown RBP10.16□□□□□ -0.78
CCDC9-203ENST00000596938 NFATC3Q12968 1075 aa10.16□□□□□ -0.78
CCDC9-203ENST00000596938 GPS2Q13227 327 aa10.16□□□□□ -0.78
CCDC9-203ENST00000596938 KCNAB2Q13303 367 aa10.16□□□□□ -0.78
CCDC9-203ENST00000596938 ERV3-1Q14264 604 aa10.16□□□□□ -0.78
CCDC9-203ENST00000596938 GRB7Q14451 532 aa10.16□□□□□ -0.78
CCDC9-203ENST00000596938 SLC5A12Q1EHB4 618 aa10.16□□□□□ -0.78
CCDC9-203ENST00000596938 C16orf46Q6P387 395 aa10.16□□□□□ -0.78
CCDC9-203ENST00000596938 CASC4Q6P4E1 433 aa10.16□□□□□ -0.78
CCDC9-203ENST00000596938 FAM199XQ6PEV8 388 aaPredicted RBP10.16□□□□□ -0.78
CCDC9-203ENST00000596938 TTC23LQ6PF05 361 aa10.16□□□□□ -0.78
CCDC9-203ENST00000596938 CILP2Q8IUL8 1156 aa10.16□□□□□ -0.78
CCDC9-203ENST00000596938 DCUN1D3Q8IWE4 304 aa10.16□□□□□ -0.78
CCDC9-203ENST00000596938 DSELQ8IZU8 1212 aa10.16□□□□□ -0.78
CCDC9-203ENST00000596938 DNAJC22Q8N4W6 341 aa10.16□□□□□ -0.78
CCDC9-203ENST00000596938 NAT8LQ8N9F0 302 aa10.16□□□□□ -0.78
CCDC9-203ENST00000596938 OR2L8Q8NGY9 312 aa10.16□□□□□ -0.78
CCDC9-203ENST00000596938 GSDMBQ8TAX9 411 aa10.16□□□□□ -0.78
CCDC9-203ENST00000596938 LPGAT1Q92604 370 aa10.16□□□□□ -0.78
CCDC9-203ENST00000596938 ANP32BQ92688 251 aaKnown RBP10.16□□□□□ -0.78
CCDC9-203ENST00000596938 RNF31Q96EP0 1072 aa10.16□□□□□ -0.78
CCDC9-203ENST00000596938 SERPINB12Q96P63 405 aa10.16□□□□□ -0.78
CCDC9-203ENST00000596938 DPH2Q9BQC3 489 aaPredicted RBP10.16□□□□□ -0.78
CCDC9-203ENST00000596938 FAM60AQ9NP50 221 aa10.16□□□□□ -0.78
CCDC9-203ENST00000596938 INTS10Q9NVR2 710 aaKnown RBP10.16□□□□□ -0.78
CCDC9-203ENST00000596938 SAMD15Q9P1V8 674 aa10.16□□□□□ -0.78
CCDC9-203ENST00000596938 VPS9D1Q9Y2B5 631 aa10.16□□□□□ -0.78
CCDC9-203ENST00000596938 KCNMB2Q9Y691 235 aa10.16□□□□□ -0.78
CCDC9-203ENST00000596938 AP1M2Q9Y6Q5 423 aa10.16□□□□□ -0.78
CCDC9-203ENST00000596938 HELZ2Q9BYK8 2649 aaKnown RBP10.16□□□□□ -0.78
CCDC9-203ENST00000596938 BAHCC1Q9P281 2608 aa10.16□□□□□ -0.78
CCDC9-203ENST00000596938 ZCWPW2A0A1B0GU75 182 aa10.15□□□□□ -0.78
CCDC9-203ENST00000596938 ISM1B1AKI9 464 aa10.15□□□□□ -0.78
CCDC9-203ENST00000596938 E7EQ34 232 aa10.15□□□□□ -0.78
CCDC9-203ENST00000596938 H3BMH7 237 aa10.15□□□□□ -0.78
CCDC9-203ENST00000596938 ZNF185O15231 689 aa10.15□□□□□ -0.78
CCDC9-203ENST00000596938 MATN4O95460 622 aa10.15□□□□□ -0.78
CCDC9-203ENST00000596938 C1orf105O95561 183 aa10.15□□□□□ -0.78
CCDC9-203ENST00000596938 S1PR4O95977 384 aa10.15□□□□□ -0.78
CCDC9-203ENST00000596938 FURINP09958 794 aa10.15□□□□□ -0.78
CCDC9-203ENST00000596938 ATP5DP30049 168 aa10.15□□□□□ -0.78
CCDC9-203ENST00000596938 PEBP1P30086 187 aaKnown RBP10.15□□□□□ -0.78
CCDC9-203ENST00000596938 PKLRP30613 574 aa10.15□□□□□ -0.78
CCDC9-203ENST00000596938 CCNFP41002 786 aa10.15□□□□□ -0.78
CCDC9-203ENST00000596938 GABRA4P48169 554 aa10.15□□□□□ -0.78
CCDC9-203ENST00000596938 TERF1P54274 439 aa10.15□□□□□ -0.78
CCDC9-203ENST00000596938 EIF3BP55884 814 aaKnown RBP10.15□□□□□ -0.78
CCDC9-203ENST00000596938 DHX34Q14147 1143 aaKnown RBP10.15□□□□□ -0.78
CCDC9-203ENST00000596938 GBX1Q14549 363 aa10.15□□□□□ -0.78
CCDC9-203ENST00000596938 ZIC1Q15915 447 aa10.15□□□□□ -0.78
CCDC9-203ENST00000596938 UGT8Q16880 541 aa10.15□□□□□ -0.78
CCDC9-203ENST00000596938 CTSL3PQ5NE16 218 aa10.15□□□□□ -0.78
CCDC9-203ENST00000596938 ATP1A1-AS1Q5TC04 95 aa10.15□□□□□ -0.78
CCDC9-203ENST00000596938 PRAMEF17Q5VTA0 474 aa10.15□□□□□ -0.78
CCDC9-203ENST00000596938 CENPUQ71F23 418 aa10.15□□□□□ -0.78
CCDC9-203ENST00000596938 SYVN1Q86TM6 617 aa10.15□□□□□ -0.78
CCDC9-203ENST00000596938 TRIM73Q86UV7 250 aa10.15□□□□□ -0.78
CCDC9-203ENST00000596938 LMNTD2Q8IXW0 634 aa10.15□□□□□ -0.78
CCDC9-203ENST00000596938 PPIL6Q8IXY8 311 aa10.15□□□□□ -0.78
CCDC9-203ENST00000596938 GPR135Q8IZ08 494 aa10.15□□□□□ -0.78
CCDC9-203ENST00000596938 OTUD6BQ8N6M0 293 aa10.15□□□□□ -0.78
CCDC9-203ENST00000596938 C19orf47Q8N9M1 422 aaKnown RBP10.15□□□□□ -0.78
CCDC9-203ENST00000596938 LINC01555Q8NAE3 123 aa10.15□□□□□ -0.78
CCDC9-203ENST00000596938 CFAP61Q8NHU2 1237 aa10.15□□□□□ -0.78
CCDC9-203ENST00000596938 MAGEC3Q8TD91 643 aa10.15□□□□□ -0.78
CCDC9-203ENST00000596938 THAP4Q8WY91 577 aa10.15□□□□□ -0.78
CCDC9-203ENST00000596938 SLCO2A1Q92959 643 aa10.15□□□□□ -0.78
CCDC9-203ENST00000596938 MR1Q95460 341 aa10.15□□□□□ -0.78
CCDC9-203ENST00000596938 RAD51AP1Q96B01 352 aa10.15□□□□□ -0.78
CCDC9-203ENST00000596938 CLIP3Q96DZ5 547 aa10.15□□□□□ -0.78
CCDC9-203ENST00000596938 PDLIM2Q96JY6 352 aa10.15□□□□□ -0.78
CCDC9-203ENST00000596938 SIGLEC10Q96LC7 697 aa10.15□□□□□ -0.78
CCDC9-203ENST00000596938 FOPNLQ96NB1 174 aa10.15□□□□□ -0.78
CCDC9-203ENST00000596938 RAB11FIP5Q9BXF6 653 aa10.15□□□□□ -0.78
CCDC9-203ENST00000596938 NLNQ9BYT8 704 aa10.15□□□□□ -0.78
CCDC9-203ENST00000596938 KLHL25Q9H0H3 589 aa10.15□□□□□ -0.78
CCDC9-203ENST00000596938 CHST8Q9H2A9 424 aa10.15□□□□□ -0.78
CCDC9-203ENST00000596938 ACTL8Q9H568 366 aa10.15□□□□□ -0.78
CCDC9-203ENST00000596938 ACTR5Q9H9F9 607 aaPredicted RBP10.15□□□□□ -0.78
CCDC9-203ENST00000596938 PCMTD2Q9NV79 361 aa10.15□□□□□ -0.78
CCDC9-203ENST00000596938 KLHL42Q9P2K6 505 aa10.15□□□□□ -0.78
CCDC9-203ENST00000596938 PCYOX1Q9UHG3 505 aa10.15□□□□□ -0.78
CCDC9-203ENST00000596938 PLAGL1Q9UM63 463 aa10.15□□□□□ -0.78
CCDC9-203ENST00000596938 POLHQ9Y253 713 aa10.15□□□□□ -0.78
CCDC9-203ENST00000596938 CRYL1Q9Y2S2 319 aa10.15□□□□□ -0.78
CCDC9-203ENST00000596938 GOLGA8MH3BSY2 632 aa10.14□□□□□ -0.79
CCDC9-203ENST00000596938 J3QKU1 62 aa10.14□□□□□ -0.79
CCDC9-203ENST00000596938 RASGRF2O14827 1237 aa10.14□□□□□ -0.79
CCDC9-203ENST00000596938 ZNF749O43361 778 aa10.14□□□□□ -0.79
CCDC9-203ENST00000596938 SUV39H1O43463 412 aa10.14□□□□□ -0.79
CCDC9-203ENST00000596938 PRICKLE3O43900 615 aaPredicted RBP10.14□□□□□ -0.79
CCDC9-203ENST00000596938 USP1O94782 785 aa10.14□□□□□ -0.79
CCDC9-203ENST00000596938 FKBP9O95302 570 aa10.14□□□□□ -0.79
CCDC9-203ENST00000596938 CAPN1P07384 714 aa10.14□□□□□ -0.79
CCDC9-203ENST00000596938 PKMP14618 531 aaKnown RBP10.14□□□□□ -0.79
CCDC9-203ENST00000596938 CHRM3P20309 590 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms