RNA–Protein interactions for RNA: ENST00000594828.7

LSM4-204, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 807 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-204ENST00000594828 IL10RAQ13651 578 aa22.66■■□□□ 1.22
LSM4-204ENST00000594828 KYNUQ16719 465 aa22.66■■□□□ 1.22
LSM4-204ENST00000594828 SLC5A12Q1EHB4 618 aa22.66■■□□□ 1.22
LSM4-204ENST00000594828 TCTN3Q6NUS6 607 aa22.66■■□□□ 1.22
LSM4-204ENST00000594828 CES3Q6UWW8 571 aa22.66■■□□□ 1.22
LSM4-204ENST00000594828 UNC5DQ6UXZ4 953 aa22.66■■□□□ 1.22
LSM4-204ENST00000594828 LRRC6Q86X45 466 aa22.66■■□□□ 1.22
LSM4-204ENST00000594828 OTUD6BQ8N6M0 293 aa22.66■■□□□ 1.22
LSM4-204ENST00000594828 GSDMBQ8TAX9 411 aa22.66■■□□□ 1.22
LSM4-204ENST00000594828 MFSD3Q96ES6 412 aa22.66■■□□□ 1.22
LSM4-204ENST00000594828 DPH2Q9BQC3 489 aaPredicted RBP22.66■■□□□ 1.22
LSM4-204ENST00000594828 SNX7Q9UNH6 387 aa22.66■■□□□ 1.22
LSM4-204ENST00000594828 KPNA5O15131 536 aa22.65■■□□□ 1.22
LSM4-204ENST00000594828 OR2B3O76000 313 aa22.65■■□□□ 1.22
LSM4-204ENST00000594828 VAPBO95292 243 aa22.65■■□□□ 1.22
LSM4-204ENST00000594828 AGXTP21549 392 aa22.65■■□□□ 1.22
LSM4-204ENST00000594828 RPS3P23396 243 aaKnown RBP eCLIP22.65■■□□□ 1.22
LSM4-204ENST00000594828 PEBP1P30086 187 aaKnown RBP22.65■■□□□ 1.22
LSM4-204ENST00000594828 PKLRP30613 574 aa22.65■■□□□ 1.22
LSM4-204ENST00000594828 CASRP41180 1078 aa22.65■■□□□ 1.22
LSM4-204ENST00000594828 VPS41P49754 854 aa22.65■■□□□ 1.22
LSM4-204ENST00000594828 GPS1Q13098 491 aa22.65■■□□□ 1.22
LSM4-204ENST00000594828 PTCHD3Q3KNS1 767 aa22.65■■□□□ 1.22
LSM4-204ENST00000594828 SDCCAG8Q86SQ7 713 aaPredicted RBP22.65■■□□□ 1.22
LSM4-204ENST00000594828 DCUN1D3Q8IWE4 304 aa22.65■■□□□ 1.22
LSM4-204ENST00000594828 SPRTNQ9H040 489 aaPredicted RBP22.65■■□□□ 1.22
LSM4-204ENST00000594828 EPN3Q9H201 632 aa22.65■■□□□ 1.22
LSM4-204ENST00000594828 TCFL5Q9UL49 500 aa22.65■■□□□ 1.22
LSM4-204ENST00000594828 SOX13Q9UN79 622 aa22.65■■□□□ 1.22
LSM4-204ENST00000594828 JRKLQ9Y4A0 524 aa22.65■■□□□ 1.22
LSM4-204ENST00000594828 AP1M2Q9Y6Q5 423 aa22.65■■□□□ 1.22
LSM4-204ENST00000594828 TLN1Q9Y490 2541 aaKnown RBP22.64■■□□□ 1.22
LSM4-204ENST00000594828 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP22.64■■□□□ 1.21
LSM4-204ENST00000594828 K7EM74 188 aa22.64■■□□□ 1.21
LSM4-204ENST00000594828 HCRTR1O43613 425 aa22.64■■□□□ 1.21
LSM4-204ENST00000594828 DNAJB5O75953 348 aa22.64■■□□□ 1.21
LSM4-204ENST00000594828 CAPN1P07384 714 aa22.64■■□□□ 1.21
LSM4-204ENST00000594828 CD9P21926 228 aa22.64■■□□□ 1.21
LSM4-204ENST00000594828 ARNTP27540 789 aa22.64■■□□□ 1.21
LSM4-204ENST00000594828 GABRA4P48169 554 aa22.64■■□□□ 1.21
LSM4-204ENST00000594828 KCNJ11Q14654 390 aa22.64■■□□□ 1.21
LSM4-204ENST00000594828 DEFB110Q30KQ9 67 aa22.64■■□□□ 1.21
LSM4-204ENST00000594828 MRNIPQ6NTE8 343 aa22.64■■□□□ 1.21
LSM4-204ENST00000594828 RASGEF1CQ8N431 466 aa22.64■■□□□ 1.21
LSM4-204ENST00000594828 MAGOHBQ96A72 148 aaKnown RBP22.64■■□□□ 1.21
LSM4-204ENST00000594828 SLC22A18Q96BI1 424 aa22.64■■□□□ 1.21
LSM4-204ENST00000594828 PBKQ96KB5 322 aa22.64■■□□□ 1.21
LSM4-204ENST00000594828 MENTQ9BUN1 341 aa22.64■■□□□ 1.21
LSM4-204ENST00000594828 TRIM55Q9BYV6 548 aa22.64■■□□□ 1.21
LSM4-204ENST00000594828 CIDEBQ9UHD4 219 aa22.64■■□□□ 1.21
LSM4-204ENST00000594828 SPTBP11277 2137 aa22.63■■□□□ 1.21
LSM4-204ENST00000594828 GOLGA8KD6RF30 607 aa22.63■■□□□ 1.21
LSM4-204ENST00000594828 GOLGA8TH3BQL2 631 aa22.63■■□□□ 1.21
LSM4-204ENST00000594828 AVILO75366 819 aa22.63■■□□□ 1.21
LSM4-204ENST00000594828 KRT14P02533 472 aa22.63■■□□□ 1.21
LSM4-204ENST00000594828 NR1D1P20393 614 aa22.63■■□□□ 1.21
LSM4-204ENST00000594828 EIF3BP55884 814 aaKnown RBP22.63■■□□□ 1.21
LSM4-204ENST00000594828 KLRB1Q12918 225 aa22.63■■□□□ 1.21
LSM4-204ENST00000594828 GRB7Q14451 532 aa22.63■■□□□ 1.21
LSM4-204ENST00000594828 TTC23LQ6PF05 361 aa22.63■■□□□ 1.21
LSM4-204ENST00000594828 FAM198BQ6UWH4 519 aa22.63■■□□□ 1.21
LSM4-204ENST00000594828 ASB18Q6ZVZ8 466 aa22.63■■□□□ 1.21
LSM4-204ENST00000594828 OTOAQ7RTW8 1153 aa22.63■■□□□ 1.21
LSM4-204ENST00000594828 C2orf73Q8N5S3 287 aaPredicted RBP22.63■■□□□ 1.21
LSM4-204ENST00000594828 LINC01555Q8NAE3 123 aa22.63■■□□□ 1.21
LSM4-204ENST00000594828 SKA2Q8WVK7 121 aaPredicted RBP22.63■■□□□ 1.21
LSM4-204ENST00000594828 MS4A14Q96JA4 679 aa22.63■■□□□ 1.21
LSM4-204ENST00000594828 SLC39A10Q9ULF5 831 aa22.63■■□□□ 1.21
LSM4-204ENST00000594828 ARGFXA6NJG6 315 aa22.62■■□□□ 1.21
LSM4-204ENST00000594828 C9J4A7 227 aa22.62■■□□□ 1.21
LSM4-204ENST00000594828 H3BMH7 237 aa22.62■■□□□ 1.21
LSM4-204ENST00000594828 PFDN6O15212 129 aa22.62■■□□□ 1.21
LSM4-204ENST00000594828 FMO4P31512 558 aa22.62■■□□□ 1.21
LSM4-204ENST00000594828 MAGEA6P43360 314 aa22.62■■□□□ 1.21
LSM4-204ENST00000594828 FAM69BQ5VUD6 431 aa22.62■■□□□ 1.21
LSM4-204ENST00000594828 ZNF385CQ66K41 422 aaPredicted RBP22.62■■□□□ 1.21
LSM4-204ENST00000594828 TTC27Q6P3X3 843 aa22.62■■□□□ 1.21
LSM4-204ENST00000594828 FAM20CQ8IXL6 584 aa22.62■■□□□ 1.21
LSM4-204ENST00000594828 DNAJC22Q8N4W6 341 aa22.62■■□□□ 1.21
LSM4-204ENST00000594828 LMNTD1Q8N9Z9 388 aa22.62■■□□□ 1.21
LSM4-204ENST00000594828 OR2L8Q8NGY9 312 aa22.62■■□□□ 1.21
LSM4-204ENST00000594828 ADAMTS17Q8TE56 1095 aa22.62■■□□□ 1.21
LSM4-204ENST00000594828 IL17FQ96PD4 163 aa22.62■■□□□ 1.21
LSM4-204ENST00000594828 TCF12Q99081 682 aa22.62■■□□□ 1.21
LSM4-204ENST00000594828 ING2Q9H160 280 aa22.62■■□□□ 1.21
LSM4-204ENST00000594828 ACSS2Q9NR19 701 aa22.62■■□□□ 1.21
LSM4-204ENST00000594828 CAMSAP3Q9P1Y5 1249 aaPredicted RBP22.62■■□□□ 1.21
LSM4-204ENST00000594828 PLCL2Q9UPR0 1127 aa22.62■■□□□ 1.21
LSM4-204ENST00000594828 RASGRF2O14827 1237 aa22.61■■□□□ 1.21
LSM4-204ENST00000594828 S1PR4O95977 384 aa22.61■■□□□ 1.21
LSM4-204ENST00000594828 CCL11P51671 97 aa22.61■■□□□ 1.21
LSM4-204ENST00000594828 CHAF1BQ13112 559 aa22.61■■□□□ 1.21
LSM4-204ENST00000594828 NCF4Q15080 339 aa22.61■■□□□ 1.21
LSM4-204ENST00000594828 CTSL3PQ5NE16 218 aa22.61■■□□□ 1.21
LSM4-204ENST00000594828 RNF187Q5TA31 235 aaPredicted RBP22.61■■□□□ 1.21
LSM4-204ENST00000594828 ARMC3Q5W041 872 aa22.61■■□□□ 1.21
LSM4-204ENST00000594828 CPZQ66K79 652 aa22.61■■□□□ 1.21
LSM4-204ENST00000594828 KIAA0930Q6ICG6 404 aaPredicted RBP22.61■■□□□ 1.21
LSM4-204ENST00000594828 TENM4Q6N022 2769 aa22.61■■□□□ 1.21
LSM4-204ENST00000594828 RHBDD2Q6NTF9 364 aa22.61■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms