RNA–Protein interactions for RNA: ENST00000590924.5

VAT1-208, Transcript of vesicle amine transport 1, humanhuman

TSL 3

Gene VAT1, Length 613 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-208ENST00000590924 TNRC6AQ8NDV7 1962 aaKnown RBP17.47■□□□□ 0.39
VAT1-208ENST00000590924 C17orf113A0A1B0GUU1 675 aa17.46■□□□□ 0.39
VAT1-208ENST00000590924 NDUFS3O75489 264 aa17.46■□□□□ 0.39
VAT1-208ENST00000590924 MTHFD1P11586 935 aaKnown RBP17.46■□□□□ 0.39
VAT1-208ENST00000590924 PPP1CAP62136 330 aa17.46■□□□□ 0.39
VAT1-208ENST00000590924 ILF2Q12905 390 aaKnown RBP17.46■□□□□ 0.39
VAT1-208ENST00000590924 SEMA3AQ14563 771 aa17.46■□□□□ 0.39
VAT1-208ENST00000590924 SLMAPQ14BN4 828 aa17.46■□□□□ 0.39
VAT1-208ENST00000590924 ATP1A1-AS1Q5TC04 95 aa17.46■□□□□ 0.39
VAT1-208ENST00000590924 C16orf46Q6P387 395 aa17.46■□□□□ 0.39
VAT1-208ENST00000590924 KIAA0408Q6ZU52 694 aa17.46■□□□□ 0.39
VAT1-208ENST00000590924 C3orf62Q6ZUJ4 267 aa17.46■□□□□ 0.39
VAT1-208ENST00000590924 GALNT7Q86SF2 657 aa17.46■□□□□ 0.39
VAT1-208ENST00000590924 CNTN4Q8IWV2 1026 aa17.46■□□□□ 0.39
VAT1-208ENST00000590924 FCRL4Q96PJ5 515 aa17.46■□□□□ 0.39
VAT1-208ENST00000590924 CD180Q99467 661 aa17.46■□□□□ 0.39
VAT1-208ENST00000590924 VPS37BQ9H9H4 285 aa17.46■□□□□ 0.39
VAT1-208ENST00000590924 LNPEPQ9UIQ6 1025 aa17.46■□□□□ 0.39
VAT1-208ENST00000590924 NFU1Q9UMS0 254 aa17.46■□□□□ 0.39
VAT1-208ENST00000590924 PCDHB3Q9Y5E6 796 aa17.46■□□□□ 0.39
VAT1-208ENST00000590924 SNRNP200O75643 2136 aaKnown RBP17.45■□□□□ 0.38
VAT1-208ENST00000590924 IGHV5-51A0A0C4DH38 117 aa17.45■□□□□ 0.38
VAT1-208ENST00000590924 PRMT5O14744 637 aaPredicted RBP17.45■□□□□ 0.38
VAT1-208ENST00000590924 SGTAO43765 313 aa17.45■□□□□ 0.38
VAT1-208ENST00000590924 MT-ND3P03897 115 aa17.45■□□□□ 0.38
VAT1-208ENST00000590924 OR56A5P0C7T3 313 aa17.45■□□□□ 0.38
VAT1-208ENST00000590924 RPS3P23396 243 aaKnown RBP eCLIP17.45■□□□□ 0.383e-7■■■■□ 26.1
VAT1-208ENST00000590924 PBLDP30039 288 aaPredicted RBP17.45■□□□□ 0.38
VAT1-208ENST00000590924 PRLHRP49683 370 aa17.45■□□□□ 0.38
VAT1-208ENST00000590924 MGAT5Q09328 741 aa17.45■□□□□ 0.38
VAT1-208ENST00000590924 PLCL1Q15111 1095 aa17.45■□□□□ 0.38
VAT1-208ENST00000590924 HSP90AA5PQ58FG0 334 aa17.45■□□□□ 0.38
VAT1-208ENST00000590924 KMT5CQ86Y97 462 aa17.45■□□□□ 0.38
VAT1-208ENST00000590924 OTUD6BQ8N6M0 293 aa17.45■□□□□ 0.38
VAT1-208ENST00000590924 SIDT2Q8NBJ9 832 aaKnown RBP17.45■□□□□ 0.38
VAT1-208ENST00000590924 RNF31Q96EP0 1072 aa17.45■□□□□ 0.38
VAT1-208ENST00000590924 ELMO2Q96JJ3 720 aa17.45■□□□□ 0.38
VAT1-208ENST00000590924 EPN3Q9H201 632 aa17.45■□□□□ 0.38
VAT1-208ENST00000590924 ANKZF1Q9H8Y5 726 aa17.45■□□□□ 0.38
VAT1-208ENST00000590924 PDE7BQ9NP56 450 aa17.45■□□□□ 0.38
VAT1-208ENST00000590924 IMP3Q9NV31 184 aaKnown RBP17.45■□□□□ 0.38
VAT1-208ENST00000590924 KCND3Q9UK17 655 aa17.45■□□□□ 0.38
VAT1-208ENST00000590924 FBXO5Q9UKT4 447 aa17.45■□□□□ 0.38
VAT1-208ENST00000590924 PCDHGA6Q9Y5G7 932 aa17.45■□□□□ 0.38
VAT1-208ENST00000590924 KCNMB2Q9Y691 235 aa17.45■□□□□ 0.38
VAT1-208ENST00000590924 HECTD1Q9ULT8 2610 aa17.45■□□□□ 0.38
VAT1-208ENST00000590924 MGAT4DA6NG13 374 aa17.44■□□□□ 0.38
VAT1-208ENST00000590924 TLCD2A6NGC4 264 aa17.44■□□□□ 0.38
VAT1-208ENST00000590924 GOLGA8KD6RF30 607 aa17.44■□□□□ 0.38
VAT1-208ENST00000590924 H3BMM5 538 aa17.44■□□□□ 0.38
VAT1-208ENST00000590924 GOLGA8TH3BQL2 631 aa17.44■□□□□ 0.38
VAT1-208ENST00000590924 S1PR4O95977 384 aa17.44■□□□□ 0.38
VAT1-208ENST00000590924 TUBBP07437 444 aa17.44■□□□□ 0.38
VAT1-208ENST00000590924 ERVK-10P10266 1014 aa17.44■□□□□ 0.38
VAT1-208ENST00000590924 CASRP41180 1078 aa17.44■□□□□ 0.38
VAT1-208ENST00000590924 TUBB3Q13509 450 aa17.44■□□□□ 0.38
VAT1-208ENST00000590924 TEDDM1Q5T9Z0 273 aa17.44■□□□□ 0.38
VAT1-208ENST00000590924 ZNF470Q6ECI4 717 aa17.44■□□□□ 0.38
VAT1-208ENST00000590924 BPHLQ86WA6 291 aaPredicted RBP17.44■□□□□ 0.38
VAT1-208ENST00000590924 BEND7Q8N7W2 519 aaPredicted RBP17.44■□□□□ 0.38
VAT1-208ENST00000590924 C2CD4AQ8NCU7 369 aaPredicted RBP17.44■□□□□ 0.38
VAT1-208ENST00000590924 OR2L2Q8NH16 312 aa17.44■□□□□ 0.38
VAT1-208ENST00000590924 ZFPM2Q8WW38 1151 aa17.44■□□□□ 0.38
VAT1-208ENST00000590924 LPGAT1Q92604 370 aa17.44■□□□□ 0.38
VAT1-208ENST00000590924 ABHD17AQ96GS6 310 aa17.44■□□□□ 0.38
VAT1-208ENST00000590924 MAP3K3Q99759 626 aa17.44■□□□□ 0.38
VAT1-208ENST00000590924 CCM2Q9BSQ5 444 aa17.44■□□□□ 0.38
VAT1-208ENST00000590924 TSSK1BQ9BXA7 367 aa17.44■□□□□ 0.38
VAT1-208ENST00000590924 P2RY12Q9H244 342 aa17.44■□□□□ 0.38
VAT1-208ENST00000590924 LRRC4CQ9HCJ2 640 aa17.44■□□□□ 0.38
VAT1-208ENST00000590924 ZNF71Q9NQZ8 489 aaPredicted RBP17.44■□□□□ 0.38
VAT1-208ENST00000590924 IARS2Q9NSE4 1012 aaKnown RBP17.44■□□□□ 0.38
VAT1-208ENST00000590924 NSMCE4AQ9NXX6 385 aa17.44■□□□□ 0.38
VAT1-208ENST00000590924 RARRES3Q9UL19 164 aa17.44■□□□□ 0.38
VAT1-208ENST00000590924 ACSL5Q9ULC5 683 aa17.44■□□□□ 0.38
VAT1-208ENST00000590924 PADI1Q9ULC6 663 aa17.44■□□□□ 0.38
VAT1-208ENST00000590924 POLHQ9Y253 713 aa17.44■□□□□ 0.38
VAT1-208ENST00000590924 FER1L5A0AVI2 2057 aa17.44■□□□□ 0.38
VAT1-208ENST00000590924 CCDC88CQ9P219 2028 aa17.43■□□□□ 0.38
VAT1-208ENST00000590924 OR5K3A6NET4 321 aa17.43■□□□□ 0.38
VAT1-208ENST00000590924 OR1I1O60431 355 aa17.43■□□□□ 0.38
VAT1-208ENST00000590924 TIAF1O95411 115 aa17.43■□□□□ 0.38
VAT1-208ENST00000590924 RECKO95980 971 aa17.43■□□□□ 0.38
VAT1-208ENST00000590924 FTH1P02794 183 aa17.43■□□□□ 0.38
VAT1-208ENST00000590924 ESR1P03372 595 aa17.43■□□□□ 0.38
VAT1-208ENST00000590924 CCNYL3P0C7X3 344 aa17.43■□□□□ 0.38
VAT1-208ENST00000590924 FOLR1P15328 257 aa17.43■□□□□ 0.38
VAT1-208ENST00000590924 MCM3P25205 808 aa17.43■□□□□ 0.38
VAT1-208ENST00000590924 SSTR1P30872 391 aa17.43■□□□□ 0.38
VAT1-208ENST00000590924 GPX6P59796 221 aa17.43■□□□□ 0.38
VAT1-208ENST00000590924 ACY1Q03154 408 aa17.43■□□□□ 0.38
VAT1-208ENST00000590924 DNASE1L3Q13609 305 aa17.43■□□□□ 0.38
VAT1-208ENST00000590924 LACTB2Q53H82 288 aaPredicted RBP17.43■□□□□ 0.38
VAT1-208ENST00000590924 WDR93Q6P2C0 686 aa17.43■□□□□ 0.38
VAT1-208ENST00000590924 TRMT10BQ6PF06 316 aaKnown RBP17.43■□□□□ 0.38
VAT1-208ENST00000590924 MICALCLQ6ZW33 695 aa17.43■□□□□ 0.38
VAT1-208ENST00000590924 DET1Q7L5Y6 550 aa17.43■□□□□ 0.38
VAT1-208ENST00000590924 LDB1Q86U70 411 aaPredicted RBP17.43■□□□□ 0.38
VAT1-208ENST00000590924 SLC26A11Q86WA9 606 aa17.43■□□□□ 0.38
VAT1-208ENST00000590924 CLDN19Q8N6F1 224 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms