RNA–Protein interactions for RNA: ENST00000590574.5

SMARCA4-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 5,282 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-215ENST00000590574 ATP6V1G1O75348 118 aa16.76■□□□□ 0.27
SMARCA4-215ENST00000590574 CD36P16671 472 aa16.76■□□□□ 0.27
SMARCA4-215ENST00000590574 DMPKQ09013 629 aa16.76■□□□□ 0.27
SMARCA4-215ENST00000590574 KIAA0319Q5VV43 1072 aa16.76■□□□□ 0.27
SMARCA4-215ENST00000590574 TADA1Q96BN2 335 aa16.76■□□□□ 0.27
SMARCA4-215ENST00000590574 CRISPLD1Q9H336 500 aa16.76■□□□□ 0.27
SMARCA4-215ENST00000590574 AMBNQ9NP70 447 aa16.76■□□□□ 0.27
SMARCA4-215ENST00000590574 ARMC1Q9NVT9 282 aa16.76■□□□□ 0.27
SMARCA4-215ENST00000590574 RUVBL1Q9Y265 456 aaKnown RBP16.76■□□□□ 0.27
SMARCA4-215ENST00000590574 PRSS51A0A1B0GVH4 220 aa16.75■□□□□ 0.27
SMARCA4-215ENST00000590574 MYADML2A6NDP7 307 aa16.75■□□□□ 0.27
SMARCA4-215ENST00000590574 CLPXO76031 633 aa16.75■□□□□ 0.27
SMARCA4-215ENST00000590574 CXCR2P25025 360 aa16.75■□□□□ 0.27
SMARCA4-215ENST00000590574 PIGFQ07326 219 aa16.75■□□□□ 0.27
SMARCA4-215ENST00000590574 GPR17Q13304 367 aa16.75■□□□□ 0.27
SMARCA4-215ENST00000590574 RAB41Q5JT25 222 aa16.75■□□□□ 0.27
SMARCA4-215ENST00000590574 MED27Q6P2C8 311 aa16.75■□□□□ 0.27
SMARCA4-215ENST00000590574 SCD5Q86SK9 330 aa16.75■□□□□ 0.27
SMARCA4-215ENST00000590574 ENTPD4Q9Y227 616 aa16.75■□□□□ 0.27
SMARCA4-215ENST00000590574 GSTK1Q9Y2Q3 226 aa16.75■□□□□ 0.27
SMARCA4-215ENST00000590574 SLC28A2O43868 658 aa16.75■□□□□ 0.27
SMARCA4-215ENST00000590574 C7P10643 843 aa16.75■□□□□ 0.27
SMARCA4-215ENST00000590574 OR52B6Q8NGF0 335 aa16.75■□□□□ 0.27
SMARCA4-215ENST00000590574 SHKBP1Q8TBC3 707 aa16.75■□□□□ 0.27
SMARCA4-215ENST00000590574 FNDC11Q9BVV2 318 aa16.75■□□□□ 0.27
SMARCA4-215ENST00000590574 PRR23D1E9PI22 279 aaPredicted RBP16.75■□□□□ 0.27
SMARCA4-215ENST00000590574 PRR23D2P0DMB1 279 aaPredicted RBP16.75■□□□□ 0.27
SMARCA4-215ENST00000590574 PRPS1L1P21108 318 aa16.75■□□□□ 0.27
SMARCA4-215ENST00000590574 GPX3P22352 226 aa16.75■□□□□ 0.27
SMARCA4-215ENST00000590574 ACLYP53396 1101 aa16.75■□□□□ 0.27
SMARCA4-215ENST00000590574 CEP78Q5JTW2 689 aa16.75■□□□□ 0.27
SMARCA4-215ENST00000590574 CHST9Q7L1S5 443 aa16.75■□□□□ 0.27
SMARCA4-215ENST00000590574 SERINC5Q86VE9 423 aa16.75■□□□□ 0.27
SMARCA4-215ENST00000590574 KRTCAP2Q8N6L1 136 aa16.75■□□□□ 0.27
SMARCA4-215ENST00000590574 C3orf30Q96M34 536 aa16.75■□□□□ 0.27
SMARCA4-215ENST00000590574 BIRC8Q96P09 236 aa16.75■□□□□ 0.27
SMARCA4-215ENST00000590574 PSKH2Q96QS6 385 aa16.75■□□□□ 0.27
SMARCA4-215ENST00000590574 ZDHHC3Q9NYG2 299 aa16.75■□□□□ 0.27
SMARCA4-215ENST00000590574 MTRRQ9UBK8 725 aa16.75■□□□□ 0.27
SMARCA4-215ENST00000590574 SLC22A14Q9Y267 594 aa16.75■□□□□ 0.27
SMARCA4-215ENST00000590574 ITGB1P05556 798 aa16.75■□□□□ 0.27
SMARCA4-215ENST00000590574 PAICSP22234 425 aaKnown RBP16.75■□□□□ 0.27
SMARCA4-215ENST00000590574 AFF1P51825 1210 aaKnown RBP16.75■□□□□ 0.27
SMARCA4-215ENST00000590574 SMIM11AP58511 58 aa16.75■□□□□ 0.27
SMARCA4-215ENST00000590574 RAB15P59190 212 aa16.75■□□□□ 0.27
SMARCA4-215ENST00000590574 TGM3Q08188 693 aa16.75■□□□□ 0.27
SMARCA4-215ENST00000590574 TUBB3Q13509 450 aa16.75■□□□□ 0.27
SMARCA4-215ENST00000590574 DPY19L1Q2PZI1 675 aa16.75■□□□□ 0.27
SMARCA4-215ENST00000590574 ARMC8Q8IUR7 673 aa16.75■□□□□ 0.27
SMARCA4-215ENST00000590574 DEPDC7Q96QD5 511 aa16.75■□□□□ 0.27
SMARCA4-215ENST00000590574 CDC14AQ9UNH5 594 aa16.75■□□□□ 0.27
SMARCA4-215ENST00000590574 SSR3Q9UNL2 185 aa16.75■□□□□ 0.27
SMARCA4-215ENST00000590574 MYO18AQ92614 2054 aaKnown RBP16.74■□□□□ 0.27
SMARCA4-215ENST00000590574 PLK4O00444 970 aa16.74■□□□□ 0.27
SMARCA4-215ENST00000590574 POP4O95707 220 aaKnown RBP16.74■□□□□ 0.27
SMARCA4-215ENST00000590574 EBLN1P0CF75 366 aa16.74■□□□□ 0.27
SMARCA4-215ENST00000590574 ITGA1P56199 1179 aa16.74■□□□□ 0.27
SMARCA4-215ENST00000590574 CYP4F8P98187 520 aa16.74■□□□□ 0.27
SMARCA4-215ENST00000590574 ABRAXAS2Q15018 415 aa16.74■□□□□ 0.27
SMARCA4-215ENST00000590574 OR8J3Q8NGG0 315 aa16.74■□□□□ 0.27
SMARCA4-215ENST00000590574 CXorf40AQ8TE69 158 aa16.74■□□□□ 0.27
SMARCA4-215ENST00000590574 ZNF641Q96N77 438 aaPredicted RBP16.74■□□□□ 0.27
SMARCA4-215ENST00000590574 KCNC2Q96PR1 638 aa16.74■□□□□ 0.27
SMARCA4-215ENST00000590574 SLC29A3Q9BZD2 475 aa16.74■□□□□ 0.27
SMARCA4-215ENST00000590574 DHRS7Q9Y394 339 aa16.74■□□□□ 0.27
SMARCA4-215ENST00000590574 KLHL33A6NCF5 533 aa16.74■□□□□ 0.27
SMARCA4-215ENST00000590574 MTX2O75431 263 aa16.74■□□□□ 0.27
SMARCA4-215ENST00000590574 TUBA3CQ13748 450 aa16.74■□□□□ 0.27
SMARCA4-215ENST00000590574 HKDC1Q2TB90 917 aa16.74■□□□□ 0.27
SMARCA4-215ENST00000590574 GPAT3Q53EU6 434 aa16.74■□□□□ 0.27
SMARCA4-215ENST00000590574 CES5AQ6NT32 575 aa16.74■□□□□ 0.27
SMARCA4-215ENST00000590574 ST13P5Q8NFI4 369 aaPredicted RBP16.74■□□□□ 0.27
SMARCA4-215ENST00000590574 FUBP1Q96AE4 644 aaKnown RBP16.74■□□□□ 0.27
SMARCA4-215ENST00000590574 ZNF597Q96LX8 424 aa16.74■□□□□ 0.27
SMARCA4-215ENST00000590574 NDEL1Q9GZM8 345 aa16.74■□□□□ 0.27
SMARCA4-215ENST00000590574 ABCB8Q9NUT2 735 aa16.74■□□□□ 0.27
SMARCA4-215ENST00000590574 GIN1Q9NXP7 522 aa16.74■□□□□ 0.27
SMARCA4-215ENST00000590574 H0Y858 1186 aa16.74■□□□□ 0.27
SMARCA4-215ENST00000590574 PPP6CO00743 305 aa16.74■□□□□ 0.27
SMARCA4-215ENST00000590574 PDE9AO76083 593 aa16.74■□□□□ 0.27
SMARCA4-215ENST00000590574 CCNDBP1O95273 360 aa16.74■□□□□ 0.27
SMARCA4-215ENST00000590574 INHBCP55103 352 aa16.74■□□□□ 0.27
SMARCA4-215ENST00000590574 PMS2P3Q13401 168 aa16.74■□□□□ 0.27
SMARCA4-215ENST00000590574 PYDC2Q56P42 97 aa16.74■□□□□ 0.27
SMARCA4-215ENST00000590574 IFNL1Q8IU54 200 aa16.74■□□□□ 0.27
SMARCA4-215ENST00000590574 TRIM48Q8IWZ4 208 aa16.74■□□□□ 0.27
SMARCA4-215ENST00000590574 SMYD1Q8NB12 490 aa16.74■□□□□ 0.27
SMARCA4-215ENST00000590574 RNFT2Q96EX2 444 aa16.74■□□□□ 0.27
SMARCA4-215ENST00000590574 ZNF607Q96SK3 696 aa16.74■□□□□ 0.27
SMARCA4-215ENST00000590574 ARVCFO00192 962 aa16.74■□□□□ 0.27
SMARCA4-215ENST00000590574 IDH3BO43837 385 aa16.74■□□□□ 0.27
SMARCA4-215ENST00000590574 GJA5P36382 358 aa16.74■□□□□ 0.27
SMARCA4-215ENST00000590574 MYBPC3Q14896 1274 aa16.74■□□□□ 0.27
SMARCA4-215ENST00000590574 SYT16Q17RD7 645 aa16.74■□□□□ 0.27
SMARCA4-215ENST00000590574 LARP4Q71RC2 724 aaKnown RBP eCLIP16.74■□□□□ 0.27
SMARCA4-215ENST00000590574 LRRC70Q7Z2Q7 622 aa16.74■□□□□ 0.27
SMARCA4-215ENST00000590574 ZFAND4Q86XD8 727 aa16.74■□□□□ 0.27
SMARCA4-215ENST00000590574 GOLM1Q8NBJ4 401 aa16.74■□□□□ 0.27
SMARCA4-215ENST00000590574 IPCEF1Q8WWN9 437 aaPredicted RBP16.74■□□□□ 0.27
SMARCA4-215ENST00000590574 ACTL7AQ9Y615 435 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms