RNA–Protein interactions for RNA: ENST00000589709.1

VAT1-206, Transcript of vesicle amine transport 1, humanhuman

TSL 4

Gene VAT1, Length 570 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-206ENST00000589709 C4orf22Q6V702 233 aa11.79□□□□□ -0.52
VAT1-206ENST00000589709 NAPRTQ6XQN6 538 aa11.79□□□□□ -0.52
VAT1-206ENST00000589709 TRIM73Q86UV7 250 aa11.79□□□□□ -0.52
VAT1-206ENST00000589709 DNAJC22Q8N4W6 341 aa11.79□□□□□ -0.52
VAT1-206ENST00000589709 ZBTB2Q8N680 514 aa11.79□□□□□ -0.52
VAT1-206ENST00000589709 CCDC89Q8N998 374 aa11.79□□□□□ -0.52
VAT1-206ENST00000589709 GLIS1Q8NBF1 620 aa11.79□□□□□ -0.52
VAT1-206ENST00000589709 SPC24Q8NBT2 197 aa11.79□□□□□ -0.52
VAT1-206ENST00000589709 PROKR1Q8TCW9 393 aa11.79□□□□□ -0.52
VAT1-206ENST00000589709 N4BP2L2Q92802 583 aaPredicted RBP11.79□□□□□ -0.52
VAT1-206ENST00000589709 IP6K3Q96PC2 410 aa11.79□□□□□ -0.52
VAT1-206ENST00000589709 EIF2B3Q9NR50 452 aaKnown RBP11.79□□□□□ -0.52
VAT1-206ENST00000589709 GUCA1BQ9UMX6 200 aa11.79□□□□□ -0.52
VAT1-206ENST00000589709 CDYLQ9Y232 598 aa11.79□□□□□ -0.52
VAT1-206ENST00000589709 DRG1Q9Y295 367 aaKnown RBP11.79□□□□□ -0.52
VAT1-206ENST00000589709 TDRKHQ9Y2W6 561 aaKnown RBP11.79□□□□□ -0.52
VAT1-206ENST00000589709 ZNF451Q9Y4E5 1061 aa11.79□□□□□ -0.52
VAT1-206ENST00000589709 MED13Q9UHV7 2174 aa11.79□□□□□ -0.52
VAT1-206ENST00000589709 NAV2Q8IVL1 2488 aa11.79□□□□□ -0.52
VAT1-206ENST00000589709 DOPEY2Q9Y3R5 2298 aa11.79□□□□□ -0.52
VAT1-206ENST00000589709 RP1L1Q8IWN7 2480 aaPredicted RBP11.78□□□□□ -0.52
VAT1-206ENST00000589709 AP3B1O00203 1094 aa11.78□□□□□ -0.52
VAT1-206ENST00000589709 PRMT5O14744 637 aaPredicted RBP11.78□□□□□ -0.52
VAT1-206ENST00000589709 HCRTR1O43613 425 aa11.78□□□□□ -0.52
VAT1-206ENST00000589709 SLCO2B1O94956 709 aa11.78□□□□□ -0.52
VAT1-206ENST00000589709 RPN2P04844 631 aa11.78□□□□□ -0.52
VAT1-206ENST00000589709 APOA4P06727 396 aa11.78□□□□□ -0.52
VAT1-206ENST00000589709 ETS1P14921 441 aa11.78□□□□□ -0.52
VAT1-206ENST00000589709 PKLRP30613 574 aa11.78□□□□□ -0.52
VAT1-206ENST00000589709 RPL22P35268 128 aaKnown RBP11.78□□□□□ -0.52
VAT1-206ENST00000589709 TTPAP49638 278 aa11.78□□□□□ -0.52
VAT1-206ENST00000589709 HSPA14Q0VDF9 509 aa11.78□□□□□ -0.52
VAT1-206ENST00000589709 SEMA3AQ14563 771 aa11.78□□□□□ -0.52
VAT1-206ENST00000589709 SSPNQ14714 243 aa11.78□□□□□ -0.52
VAT1-206ENST00000589709 SIX1Q15475 284 aaPredicted RBP11.78□□□□□ -0.52
VAT1-206ENST00000589709 PCID2Q5JVF3 399 aa11.78□□□□□ -0.52
VAT1-206ENST00000589709 UNC5DQ6UXZ4 953 aa11.78□□□□□ -0.52
VAT1-206ENST00000589709 ZNF662Q6ZS27 426 aa11.78□□□□□ -0.52
VAT1-206ENST00000589709 RAB43Q86YS6 212 aa11.78□□□□□ -0.52
VAT1-206ENST00000589709 PPHLN1Q8NEY8 458 aaKnown RBP11.78□□□□□ -0.52
VAT1-206ENST00000589709 SLC22A18Q96BI1 424 aa11.78□□□□□ -0.52
VAT1-206ENST00000589709 GBP5Q96PP8 586 aa11.78□□□□□ -0.52
VAT1-206ENST00000589709 MENTQ9BUN1 341 aa11.78□□□□□ -0.52
VAT1-206ENST00000589709 SPRTNQ9H040 489 aaPredicted RBP11.78□□□□□ -0.52
VAT1-206ENST00000589709 ANKMY1Q9P2S6 941 aa11.78□□□□□ -0.52
VAT1-206ENST00000589709 ANAPC5Q9UJX4 755 aa11.78□□□□□ -0.52
VAT1-206ENST00000589709 G3BP2Q9UN86 482 aaKnown RBP11.78□□□□□ -0.52
VAT1-206ENST00000589709 SRPK3Q9UPE1 567 aa11.78□□□□□ -0.52
VAT1-206ENST00000589709 PLCL2Q9UPR0 1127 aa11.78□□□□□ -0.52
VAT1-206ENST00000589709 ZKSCAN5Q9Y2L8 839 aa11.78□□□□□ -0.52
VAT1-206ENST00000589709 COL12A1Q99715 3063 aa11.78□□□□□ -0.52
VAT1-206ENST00000589709 TTLL8A6PVC2 850 aa11.77□□□□□ -0.53
VAT1-206ENST00000589709 CYSRT1A8MQ03 144 aa11.77□□□□□ -0.53
VAT1-206ENST00000589709 ISM1B1AKI9 464 aa11.77□□□□□ -0.53
VAT1-206ENST00000589709 CD3EAPO15446 510 aaKnown RBP11.77□□□□□ -0.53
VAT1-206ENST00000589709 ZSCAN9O15535 394 aaPredicted RBP11.77□□□□□ -0.53
VAT1-206ENST00000589709 FKBP9O95302 570 aa11.77□□□□□ -0.53
VAT1-206ENST00000589709 IGHEP01854 428 aa11.77□□□□□ -0.53
VAT1-206ENST00000589709 CBSLP0DN79 551 aa11.77□□□□□ -0.53
VAT1-206ENST00000589709 CD9P21926 228 aa11.77□□□□□ -0.53
VAT1-206ENST00000589709 AOAHP28039 575 aa11.77□□□□□ -0.53
VAT1-206ENST00000589709 PEBP1P30086 187 aaKnown RBP11.77□□□□□ -0.53
VAT1-206ENST00000589709 CBSP35520 551 aa11.77□□□□□ -0.53
VAT1-206ENST00000589709 NPY2RP49146 381 aa11.77□□□□□ -0.53
VAT1-206ENST00000589709 DCDP81605 110 aaKnown RBP11.77□□□□□ -0.53
VAT1-206ENST00000589709 SNX1Q13596 522 aa11.77□□□□□ -0.53
VAT1-206ENST00000589709 GRB7Q14451 532 aa11.77□□□□□ -0.53
VAT1-206ENST00000589709 FAM69BQ5VUD6 431 aa11.77□□□□□ -0.53
VAT1-206ENST00000589709 PRUNE1Q86TP1 453 aa11.77□□□□□ -0.53
VAT1-206ENST00000589709 VRK3Q8IV63 474 aa11.77□□□□□ -0.53
VAT1-206ENST00000589709 DCUN1D3Q8IWE4 304 aa11.77□□□□□ -0.53
VAT1-206ENST00000589709 MPP5Q8N3R9 675 aa11.77□□□□□ -0.53
VAT1-206ENST00000589709 FAM26EQ8N5C1 309 aa11.77□□□□□ -0.53
VAT1-206ENST00000589709 GALNT11Q8NCW6 608 aa11.77□□□□□ -0.53
VAT1-206ENST00000589709 FDCSPQ8NFU4 85 aa11.77□□□□□ -0.53
VAT1-206ENST00000589709 IL22Q9GZX6 179 aa11.77□□□□□ -0.53
VAT1-206ENST00000589709 CHRAC1Q9NRG0 131 aa11.77□□□□□ -0.53
VAT1-206ENST00000589709 ENAMQ9NRM1 1142 aa11.77□□□□□ -0.53
VAT1-206ENST00000589709 TREX1Q9NSU2 369 aa11.77□□□□□ -0.53
VAT1-206ENST00000589709 CATSPERZQ9NTU4 200 aa11.77□□□□□ -0.53
VAT1-206ENST00000589709 KPNA5O15131 536 aa11.76□□□□□ -0.53
VAT1-206ENST00000589709 DPM1O60762 260 aa11.76□□□□□ -0.53
VAT1-206ENST00000589709 SORBS2O94875 1100 aaKnown RBP11.76□□□□□ -0.53
VAT1-206ENST00000589709 ONECUT2O95948 504 aa11.76□□□□□ -0.53
VAT1-206ENST00000589709 S1PR4O95977 384 aa11.76□□□□□ -0.53
VAT1-206ENST00000589709 ZSCAN5DPP0CG00 497 aa11.76□□□□□ -0.53
VAT1-206ENST00000589709 RPS3P23396 243 aaKnown RBP eCLIP11.76□□□□□ -0.532e-7■■■■■ 33.2
VAT1-206ENST00000589709 GCGRP47871 477 aa11.76□□□□□ -0.53
VAT1-206ENST00000589709 CSE1LP55060 971 aaKnown RBP11.76□□□□□ -0.53
VAT1-206ENST00000589709 ATP1A4Q13733 1029 aa11.76□□□□□ -0.53
VAT1-206ENST00000589709 TMED2Q15363 201 aa11.76□□□□□ -0.53
VAT1-206ENST00000589709 DEFB110Q30KQ9 67 aa11.76□□□□□ -0.53
VAT1-206ENST00000589709 NADK2Q4G0N4 442 aa11.76□□□□□ -0.53
VAT1-206ENST00000589709 MLIPQ5VWP3 458 aa11.76□□□□□ -0.53
VAT1-206ENST00000589709 MRPL14Q6P1L8 145 aaKnown RBP11.76□□□□□ -0.53
VAT1-206ENST00000589709 MRGPREQ86SM8 312 aa11.76□□□□□ -0.53
VAT1-206ENST00000589709 LRRC6Q86X45 466 aa11.76□□□□□ -0.53
VAT1-206ENST00000589709 ZNF655Q8N720 491 aaPredicted RBP11.76□□□□□ -0.53
VAT1-206ENST00000589709 EFCAB3Q8N7B9 438 aa11.76□□□□□ -0.53
VAT1-206ENST00000589709 LINC01555Q8NAE3 123 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms