RNA–Protein interactions for RNA: ENST00000584796.5

VAPA-208, Transcript of VAMP associated protein A, human

TSL 3

Gene VAPA, Length 654 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VAPA-208	ENST00000584796	ADORA1	P30542	326 aa		2.59	□□□□□ -1.99
VAPA-208	ENST00000584796	GABRB2	P47870	512 aa		2.59	□□□□□ -1.99
VAPA-208	ENST00000584796	ARCN1	P48444	511 aa	Known RBP	2.59	□□□□□ -1.99
VAPA-208	ENST00000584796	ARL4C	P56559	192 aa		2.59	□□□□□ -1.99
VAPA-208	ENST00000584796	SORD	Q00796	357 aa		2.59	□□□□□ -1.99
VAPA-208	ENST00000584796	ITGA9	Q13797	1035 aa		2.59	□□□□□ -1.99
VAPA-208	ENST00000584796	DECR1	Q16698	335 aa		2.59	□□□□□ -1.99
VAPA-208	ENST00000584796	INTS11	Q5TA45	600 aa	Known RBP	2.59	□□□□□ -1.99
VAPA-208	ENST00000584796	FKBP1C	Q5VVH2	108 aa		2.59	□□□□□ -1.99
VAPA-208	ENST00000584796	FAAP20	Q6NZ36	180 aa		2.59	□□□□□ -1.99
VAPA-208	ENST00000584796	MZT2B	Q6NZ67	158 aa		2.59	□□□□□ -1.99
VAPA-208	ENST00000584796	PQLC2	Q6ZP29	291 aa		2.59	□□□□□ -1.99
VAPA-208	ENST00000584796	FASTKD5	Q7L8L6	764 aa	Known RBP	2.59	□□□□□ -1.99
VAPA-208	ENST00000584796	ACVR1C	Q8NER5	493 aa		2.59	□□□□□ -1.99
VAPA-208	ENST00000584796	HMGCLL1	Q8TB92	370 aa		2.59	□□□□□ -1.99
VAPA-208	ENST00000584796	ZNF473	Q8WTR7	871 aa	Known RBP	2.59	□□□□□ -1.99
VAPA-208	ENST00000584796	NOC3L	Q8WTT2	800 aa	Known RBP	2.59	□□□□□ -1.99
VAPA-208	ENST00000584796	ZNF653	Q96CK0	615 aa		2.59	□□□□□ -1.99
VAPA-208	ENST00000584796	ORAI1	Q96D31	301 aa		2.59	□□□□□ -1.99
VAPA-208	ENST00000584796	LINC00479	Q96M42	142 aa		2.59	□□□□□ -1.99
VAPA-208	ENST00000584796	IFIH1	Q9BYX4	1025 aa	Known RBP	2.59	□□□□□ -1.99
VAPA-208	ENST00000584796	PDZD7	Q9H5P4	517 aa		2.59	□□□□□ -1.99
VAPA-208	ENST00000584796	ZDHHC18	Q9NUE0	388 aa		2.59	□□□□□ -1.99
VAPA-208	ENST00000584796	CLIC5	Q9NZA1	410 aa		2.59	□□□□□ -1.99
VAPA-208	ENST00000584796	PDP2	Q9P2J9	529 aa		2.59	□□□□□ -1.99
VAPA-208	ENST00000584796	NOL12	Q9UGY1	213 aa	Known RBP eCLIP	2.59	□□□□□ -1.99
VAPA-208	ENST00000584796	GPR52	Q9Y2T5	361 aa		2.59	□□□□□ -1.99
VAPA-208	ENST00000584796	KIAA1217	Q5T5P2	1943 aa		2.59	□□□□□ -1.99
VAPA-208	ENST00000584796	C2orf16	Q68DN1	1984 aa		2.59	□□□□□ -2
VAPA-208	ENST00000584796	UTY	O14607	1347 aa		2.59	□□□□□ -2
VAPA-208	ENST00000584796	GRIN2D	O15399	1336 aa		2.59	□□□□□ -2
VAPA-208	ENST00000584796	SYNRG	Q9UMZ2	1314 aa		2.59	□□□□□ -2
VAPA-208	ENST00000584796	MAPK8IP3	Q9UPT6	1336 aa		2.59	□□□□□ -2
VAPA-208	ENST00000584796	PATJ	Q8NI35	1801 aa		2.58	□□□□□ -2
VAPA-208	ENST00000584796	DENND4A	Q7Z401	1863 aa		2.58	□□□□□ -2
VAPA-208	ENST00000584796	TICRR	Q7Z2Z1	1910 aa		2.58	□□□□□ -2
VAPA-208	ENST00000584796	RALGAPA1	Q6GYQ0	2036 aa		2.58	□□□□□ -2
VAPA-208	ENST00000584796	DOCK6	Q96HP0	2047 aa		2.58	□□□□□ -2
VAPA-208	ENST00000584796		H3BQ06	376 aa	Predicted RBP	2.58	□□□□□ -2
VAPA-208	ENST00000584796	NCAM2	O15394	837 aa		2.58	□□□□□ -2
VAPA-208	ENST00000584796	SEC14L5	O43304	696 aa		2.58	□□□□□ -2
VAPA-208	ENST00000584796	GUCY1B2	O75343	617 aa		2.58	□□□□□ -2
VAPA-208	ENST00000584796	TIMP1	P01033	207 aa		2.58	□□□□□ -2
VAPA-208	ENST00000584796	EGF	P01133	1207 aa		2.58	□□□□□ -2
VAPA-208	ENST00000584796	HOXB5	P09067	269 aa		2.58	□□□□□ -2
VAPA-208	ENST00000584796	RGS2	P41220	211 aa		2.58	□□□□□ -2
VAPA-208	ENST00000584796	RXRG	P48443	463 aa		2.58	□□□□□ -2
VAPA-208	ENST00000584796	NR2C2	P49116	596 aa		2.58	□□□□□ -2
VAPA-208	ENST00000584796	CDH15	P55291	814 aa		2.58	□□□□□ -2
VAPA-208	ENST00000584796	CCL23	P55773	120 aa		2.58	□□□□□ -2
VAPA-208	ENST00000584796	PLIN5	Q00G26	463 aa		2.58	□□□□□ -2
VAPA-208	ENST00000584796	SPOCK1	Q08629	439 aa		2.58	□□□□□ -2
VAPA-208	ENST00000584796	SLC12A1	Q13621	1099 aa		2.58	□□□□□ -2
VAPA-208	ENST00000584796	GRB14	Q14449	540 aa		2.58	□□□□□ -2
VAPA-208	ENST00000584796	ZFP69	Q49AA0	526 aa		2.58	□□□□□ -2
VAPA-208	ENST00000584796	ATG16L1	Q676U5	607 aa		2.58	□□□□□ -2
VAPA-208	ENST00000584796	CFAP161	Q6P656	301 aa		2.58	□□□□□ -2
VAPA-208	ENST00000584796	ZNF440	Q8IYI8	595 aa		2.58	□□□□□ -2
VAPA-208	ENST00000584796	ACER1	Q8TDN7	264 aa		2.58	□□□□□ -2
VAPA-208	ENST00000584796	ARNTL2	Q8WYA1	636 aa		2.58	□□□□□ -2
VAPA-208	ENST00000584796	HERVK_113	Q902F9	699 aa		2.58	□□□□□ -2
VAPA-208	ENST00000584796	ERP27	Q96DN0	273 aa		2.58	□□□□□ -2
VAPA-208	ENST00000584796	SENP5	Q96HI0	755 aa	Predicted RBP	2.58	□□□□□ -2
VAPA-208	ENST00000584796	POM121L2	Q96KW2	1035 aa		2.58	□□□□□ -2
VAPA-208	ENST00000584796	EIF2AK1	Q9BQI3	630 aa	Known RBP	2.58	□□□□□ -2
VAPA-208	ENST00000584796	PYM1	Q9BRP8	204 aa	Known RBP	2.58	□□□□□ -2
VAPA-208	ENST00000584796	H2AFJ	Q9BTM1	129 aa		2.58	□□□□□ -2
VAPA-208	ENST00000584796	TRIM15	Q9C019	465 aa		2.58	□□□□□ -2
VAPA-208	ENST00000584796	INTS2	Q9H0H0	1204 aa	Known RBP	2.58	□□□□□ -2
VAPA-208	ENST00000584796	UNC45A	Q9H3U1	944 aa		2.58	□□□□□ -2
VAPA-208	ENST00000584796	UBE2Z	Q9H832	354 aa	Predicted RBP	2.58	□□□□□ -2
VAPA-208	ENST00000584796	SEBOX	Q9HB31	216 aa	Predicted RBP	2.58	□□□□□ -2
VAPA-208	ENST00000584796	ADPRHL2	Q9NX46	363 aa		2.58	□□□□□ -2
VAPA-208	ENST00000584796	RRN3	Q9NYV6	651 aa		2.58	□□□□□ -2
VAPA-208	ENST00000584796	MARCH4	Q9P2E8	410 aa	Predicted RBP	2.58	□□□□□ -2
VAPA-208	ENST00000584796	SLC25A10	Q9UBX3	287 aa	Predicted RBP	2.58	□□□□□ -2
VAPA-208	ENST00000584796	MUTYH	Q9UIF7	546 aa		2.58	□□□□□ -2
VAPA-208	ENST00000584796	HSF4	Q9ULV5	492 aa		2.58	□□□□□ -2
VAPA-208	ENST00000584796	A4GNT	Q9UNA3	340 aa		2.58	□□□□□ -2
VAPA-208	ENST00000584796	ASTN1	O14525	1302 aa		2.58	□□□□□ -2
VAPA-208	ENST00000584796	GAK	O14976	1311 aa		2.58	□□□□□ -2
VAPA-208	ENST00000584796	ITIH6	Q6UXX5	1313 aa		2.58	□□□□□ -2
VAPA-208	ENST00000584796	LAMA1	P25391	3075 aa		2.57	□□□□□ -2
VAPA-208	ENST00000584796	LAMA5	O15230	3695 aa		2.57	□□□□□ -2
VAPA-208	ENST00000584796		A0A0J9YWU9	116 aa		2.57	□□□□□ -2
VAPA-208	ENST00000584796		A0A1W2PPI3	338 aa		2.57	□□□□□ -2
VAPA-208	ENST00000584796	C5orf60	A6NFR6	353 aa		2.57	□□□□□ -2
VAPA-208	ENST00000584796	KBTBD13	C9JR72	458 aa		2.57	□□□□□ -2
VAPA-208	ENST00000584796		K7ENM7	598 aa		2.57	□□□□□ -2
VAPA-208	ENST00000584796	PDE9A	O76083	593 aa		2.57	□□□□□ -2
VAPA-208	ENST00000584796	MBD4	O95243	580 aa		2.57	□□□□□ -2
VAPA-208	ENST00000584796	TSHB	P01222	138 aa		2.57	□□□□□ -2
VAPA-208	ENST00000584796	PGK2	P07205	417 aa		2.57	□□□□□ -2
VAPA-208	ENST00000584796	HOXB7	P09629	217 aa		2.57	□□□□□ -2
VAPA-208	ENST00000584796	HOXA13	P31271	388 aa	Predicted RBP	2.57	□□□□□ -2
VAPA-208	ENST00000584796	BTD	P43251	543 aa		2.57	□□□□□ -2
VAPA-208	ENST00000584796	ACLY	P53396	1101 aa		2.57	□□□□□ -2
VAPA-208	ENST00000584796	BACE1	P56817	501 aa		2.57	□□□□□ -2
VAPA-208	ENST00000584796	CLDN20	P56880	219 aa		2.57	□□□□□ -2
VAPA-208	ENST00000584796	IRX3	P78415	501 aa	Predicted RBP	2.57	□□□□□ -2

Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms