RNA–Protein interactions for RNA: ENST00000584112.1

CCDC47-206, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2

Gene CCDC47, Length 588 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-206ENST00000584112 LMAN1P49257 510 aa10.79□□□□□ -0.68
CCDC47-206ENST00000584112 CDKN1CP49918 316 aaPredicted RBP10.79□□□□□ -0.68
CCDC47-206ENST00000584112 TUBB4BP68371 445 aa10.79□□□□□ -0.68
CCDC47-206ENST00000584112 DNASE1L3Q13609 305 aa10.79□□□□□ -0.68
CCDC47-206ENST00000584112 TUBB2AQ13885 445 aa10.79□□□□□ -0.68
CCDC47-206ENST00000584112 ITIH4Q14624 930 aa10.79□□□□□ -0.68
CCDC47-206ENST00000584112 KCNAB1Q14722 419 aa10.79□□□□□ -0.68
CCDC47-206ENST00000584112 LYPLAL1Q5VWZ2 237 aa10.79□□□□□ -0.68
CCDC47-206ENST00000584112 SLC6A19Q695T7 634 aa10.79□□□□□ -0.68
CCDC47-206ENST00000584112 PWWP2BQ6NUJ5 590 aa10.79□□□□□ -0.68
CCDC47-206ENST00000584112 PACS1Q6VY07 963 aa10.79□□□□□ -0.68
CCDC47-206ENST00000584112 PPP1R21Q6ZMI0 780 aa10.79□□□□□ -0.68
CCDC47-206ENST00000584112 TAB3Q8N5C8 712 aaPredicted RBP10.79□□□□□ -0.68
CCDC47-206ENST00000584112 ATG4AQ8WYN0 398 aa10.79□□□□□ -0.68
CCDC47-206ENST00000584112 RNF31Q96EP0 1072 aa10.79□□□□□ -0.68
CCDC47-206ENST00000584112 FERD3LQ96RJ6 166 aa10.79□□□□□ -0.68
CCDC47-206ENST00000584112 TTC1Q99614 292 aa10.79□□□□□ -0.68
CCDC47-206ENST00000584112 TUBB2BQ9BVA1 445 aa10.79□□□□□ -0.68
CCDC47-206ENST00000584112 OR52A5Q9H2C5 316 aa10.79□□□□□ -0.68
CCDC47-206ENST00000584112 SRMSQ9H3Y6 488 aa10.79□□□□□ -0.68
CCDC47-206ENST00000584112 SYTL2Q9HCH5 934 aa10.79□□□□□ -0.68
CCDC47-206ENST00000584112 LHX9Q9NQ69 397 aa10.79□□□□□ -0.68
CCDC47-206ENST00000584112 C1GALT1Q9NS00 363 aa10.79□□□□□ -0.68
CCDC47-206ENST00000584112 SMARCAL1Q9NZC9 954 aa10.79□□□□□ -0.68
CCDC47-206ENST00000584112 POMT2Q9UKY4 750 aa10.79□□□□□ -0.68
CCDC47-206ENST00000584112 GUCA1BQ9UMX6 200 aa10.79□□□□□ -0.68
CCDC47-206ENST00000584112 ZNF148Q9UQR1 794 aa10.79□□□□□ -0.68
CCDC47-206ENST00000584112 OSGIN2Q9Y236 505 aa10.79□□□□□ -0.68
CCDC47-206ENST00000584112 POLHQ9Y253 713 aa10.79□□□□□ -0.68
CCDC47-206ENST00000584112 BTRCQ9Y297 605 aa10.79□□□□□ -0.68
CCDC47-206ENST00000584112 PCDHGA6Q9Y5G7 932 aa10.79□□□□□ -0.68
CCDC47-206ENST00000584112 GSAPA4D1B5 854 aa10.78□□□□□ -0.68
CCDC47-206ENST00000584112 LIN7AO14910 233 aaPredicted RBP10.78□□□□□ -0.68
CCDC47-206ENST00000584112 CPNE3O75131 537 aaKnown RBP10.78□□□□□ -0.68
CCDC47-206ENST00000584112 SCRG1O75711 98 aa10.78□□□□□ -0.68
CCDC47-206ENST00000584112 SUN1O94901 812 aa10.78□□□□□ -0.68
CCDC47-206ENST00000584112 TIAF1O95411 115 aa10.78□□□□□ -0.68
CCDC47-206ENST00000584112 IFNB1P01574 187 aa10.78□□□□□ -0.68
CCDC47-206ENST00000584112 PSMA3P25788 255 aa10.78□□□□□ -0.68
CCDC47-206ENST00000584112 PPARGP37231 505 aaPredicted RBP10.78□□□□□ -0.68
CCDC47-206ENST00000584112 ARCN1P48444 511 aaKnown RBP10.78□□□□□ -0.68
CCDC47-206ENST00000584112 KPNA2P52292 529 aaKnown RBP10.78□□□□□ -0.68
CCDC47-206ENST00000584112 ITGA1P56199 1179 aa10.78□□□□□ -0.68
CCDC47-206ENST00000584112 CHAF1BQ13112 559 aa10.78□□□□□ -0.68
CCDC47-206ENST00000584112 ART3Q13508 389 aa10.78□□□□□ -0.68
CCDC47-206ENST00000584112 OASLQ15646 514 aaKnown RBP10.78□□□□□ -0.68
CCDC47-206ENST00000584112 DBN1Q16643 649 aa10.78□□□□□ -0.68
CCDC47-206ENST00000584112 ZNF658BQ4V348 819 aaPredicted RBP10.78□□□□□ -0.68
CCDC47-206ENST00000584112 NLRP9Q7RTR0 991 aa10.78□□□□□ -0.68
CCDC47-206ENST00000584112 SLC13A5Q86YT5 568 aaPredicted RBP10.78□□□□□ -0.68
CCDC47-206ENST00000584112 TMEM126BQ8IUX1 230 aa10.78□□□□□ -0.68
CCDC47-206ENST00000584112 PIANPQ8IYJ0 282 aa10.78□□□□□ -0.68
CCDC47-206ENST00000584112 CLDN19Q8N6F1 224 aa10.78□□□□□ -0.68
CCDC47-206ENST00000584112 CCDC89Q8N998 374 aa10.78□□□□□ -0.68
CCDC47-206ENST00000584112 OR4E2Q8NGC2 313 aa10.78□□□□□ -0.68
CCDC47-206ENST00000584112 OR52K1Q8NGK4 314 aa10.78□□□□□ -0.68
CCDC47-206ENST00000584112 CT55Q8WUE5 264 aa10.78□□□□□ -0.68
CCDC47-206ENST00000584112 TFGQ92734 400 aaPredicted RBP10.78□□□□□ -0.68
CCDC47-206ENST00000584112 SLC25A23Q9BV35 468 aa10.78□□□□□ -0.68
CCDC47-206ENST00000584112 GPR87Q9BY21 358 aa10.78□□□□□ -0.68
CCDC47-206ENST00000584112 TFB2MQ9H5Q4 396 aaKnown RBP10.78□□□□□ -0.68
CCDC47-206ENST00000584112 KCND1Q9NSA2 647 aa10.78□□□□□ -0.68
CCDC47-206ENST00000584112 PIH1D1Q9NWS0 290 aaKnown RBP10.78□□□□□ -0.68
CCDC47-206ENST00000584112 RIMKLBQ9ULI2 386 aa10.78□□□□□ -0.68
CCDC47-206ENST00000584112 KLF2Q9Y5W3 355 aaPredicted RBP10.78□□□□□ -0.68
CCDC47-206ENST00000584112 NOTCH1P46531 2555 aa10.78□□□□□ -0.68
CCDC47-206ENST00000584112 CDC14CA4D256 554 aa10.77□□□□□ -0.69
CCDC47-206ENST00000584112 C2orf74A8MZ97 194 aa10.77□□□□□ -0.69
CCDC47-206ENST00000584112 KDM1AO60341 852 aa10.77□□□□□ -0.69
CCDC47-206ENST00000584112 CREG1O75629 220 aa10.77□□□□□ -0.69
CCDC47-206ENST00000584112 OR56A5P0C7T3 313 aa10.77□□□□□ -0.69
CCDC47-206ENST00000584112 MSL3P1P0C860 447 aa10.77□□□□□ -0.69
CCDC47-206ENST00000584112 PRSS56P0CW18 603 aa10.77□□□□□ -0.69
CCDC47-206ENST00000584112 PDHA2P29803 388 aa10.77□□□□□ -0.69
CCDC47-206ENST00000584112 FOXN2P32314 431 aa10.77□□□□□ -0.69
CCDC47-206ENST00000584112 PREPP48147 710 aa10.77□□□□□ -0.69
CCDC47-206ENST00000584112 RPS15P62841 145 aaKnown RBP10.77□□□□□ -0.69
CCDC47-206ENST00000584112 PPP2R2AP63151 447 aa10.77□□□□□ -0.69
CCDC47-206ENST00000584112 PLOD1Q02809 727 aaPredicted RBP10.77□□□□□ -0.69
CCDC47-206ENST00000584112 SEMA5AQ13591 1074 aa10.77□□□□□ -0.69
CCDC47-206ENST00000584112 BOP1Q14137 746 aaKnown RBP10.77□□□□□ -0.69
CCDC47-206ENST00000584112 RPS6KA1Q15418 735 aa10.77□□□□□ -0.69
CCDC47-206ENST00000584112 GPR19Q15760 415 aa10.77□□□□□ -0.69
CCDC47-206ENST00000584112 CCDC38Q502W7 563 aa10.77□□□□□ -0.69
CCDC47-206ENST00000584112 CPZQ66K79 652 aa10.77□□□□□ -0.69
CCDC47-206ENST00000584112 AFTPHQ6ULP2 937 aa10.77□□□□□ -0.69
CCDC47-206ENST00000584112 CERS6Q6ZMG9 384 aa10.77□□□□□ -0.69
CCDC47-206ENST00000584112 FJX1Q86VR8 437 aa10.77□□□□□ -0.69
CCDC47-206ENST00000584112 HOOK3Q86VS8 718 aa10.77□□□□□ -0.69
CCDC47-206ENST00000584112 AMIGO1Q86WK6 493 aa10.77□□□□□ -0.69
CCDC47-206ENST00000584112 RBMXL3Q8N7X1 1067 aaKnown RBP10.77□□□□□ -0.69
CCDC47-206ENST00000584112 OR52E1Q8NGJ3 308 aa10.77□□□□□ -0.69
CCDC47-206ENST00000584112 CPT1BQ92523 772 aa10.77□□□□□ -0.69
CCDC47-206ENST00000584112 ELMO1Q92556 727 aa10.77□□□□□ -0.69
CCDC47-206ENST00000584112 PEX13Q92968 403 aa10.77□□□□□ -0.69
CCDC47-206ENST00000584112 ZNF501Q96CX3 271 aaPredicted RBP10.77□□□□□ -0.69
CCDC47-206ENST00000584112 TWSG1Q9GZX9 223 aa10.77□□□□□ -0.69
CCDC47-206ENST00000584112 ETNK1Q9HBU6 452 aa10.77□□□□□ -0.69
CCDC47-206ENST00000584112 RAB6BQ9NRW1 208 aa10.77□□□□□ -0.69
CCDC47-206ENST00000584112 PAK5Q9P286 719 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms