RNA–Protein interactions for RNA: ENST00000583294.1

SMARCE1-219, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-219ENST00000583294 FEVQ99581 238 aa5.16□□□□□ -1.58
SMARCE1-219ENST00000583294 SLC25A23Q9BV35 468 aa5.16□□□□□ -1.58
SMARCE1-219ENST00000583294 SDF2L1Q9HCN8 221 aa5.16□□□□□ -1.58
SMARCE1-219ENST00000583294 DAPK2Q9UIK4 370 aa5.16□□□□□ -1.58
SMARCE1-219ENST00000583294 DNM1LO00429 736 aa5.15□□□□□ -1.59
SMARCE1-219ENST00000583294 PTGESO14684 152 aa5.15□□□□□ -1.59
SMARCE1-219ENST00000583294 TSHBP01222 138 aa5.15□□□□□ -1.59
SMARCE1-219ENST00000583294 IGHV2-70P01814 119 aa5.15□□□□□ -1.59
SMARCE1-219ENST00000583294 PRSS1P07477 247 aa5.15□□□□□ -1.59
SMARCE1-219ENST00000583294 HSPA8P11142 646 aaKnown RBP5.15□□□□□ -1.59
SMARCE1-219ENST00000583294 CD22P20273 847 aa5.15□□□□□ -1.59
SMARCE1-219ENST00000583294 MNDAP41218 407 aa5.15□□□□□ -1.59
SMARCE1-219ENST00000583294 LGALS3BPQ08380 585 aa5.15□□□□□ -1.59
SMARCE1-219ENST00000583294 ZNF415Q09FC8 603 aa5.15□□□□□ -1.59
SMARCE1-219ENST00000583294 PRR27Q6MZM9 219 aa5.15□□□□□ -1.59
SMARCE1-219ENST00000583294 C11orf63Q6NUN7 778 aa5.15□□□□□ -1.59
SMARCE1-219ENST00000583294 SUSD1Q6UWL2 747 aa5.15□□□□□ -1.59
SMARCE1-219ENST00000583294 CDK20Q8IZL9 346 aa5.15□□□□□ -1.59
SMARCE1-219ENST00000583294 OR11H4Q8NGC9 324 aa5.15□□□□□ -1.59
SMARCE1-219ENST00000583294 FCAMRQ8WWV6 532 aa5.15□□□□□ -1.59
SMARCE1-219ENST00000583294 TM9SF4Q92544 642 aa5.15□□□□□ -1.59
SMARCE1-219ENST00000583294 TMEM143Q96AN5 459 aa5.15□□□□□ -1.59
SMARCE1-219ENST00000583294 SPSB1Q96BD6 273 aa5.15□□□□□ -1.59
SMARCE1-219ENST00000583294 MOB3AQ96BX8 217 aa5.15□□□□□ -1.59
SMARCE1-219ENST00000583294 DHX58Q96C10 678 aa5.15□□□□□ -1.59
SMARCE1-219ENST00000583294 MUS81Q96NY9 551 aa5.15□□□□□ -1.59
SMARCE1-219ENST00000583294 GKN1Q9NS71 199 aa5.15□□□□□ -1.59
SMARCE1-219ENST00000583294 COQ3Q9NZJ6 369 aa5.15□□□□□ -1.59
SMARCE1-219ENST00000583294 TBC1D7Q9P0N9 293 aa5.15□□□□□ -1.59
SMARCE1-219ENST00000583294 CACNG4Q9UBN1 327 aa5.15□□□□□ -1.59
SMARCE1-219ENST00000583294 ACAD8Q9UKU7 415 aa5.15□□□□□ -1.59
SMARCE1-219ENST00000583294 TMED3Q9Y3Q3 217 aa5.15□□□□□ -1.59
SMARCE1-219ENST00000583294 RIPK3Q9Y572 518 aa5.15□□□□□ -1.59
SMARCE1-219ENST00000583294 CLDN4O14493 209 aa5.14□□□□□ -1.59
SMARCE1-219ENST00000583294 RECQL5O94762 991 aaPredicted RBP5.14□□□□□ -1.59
SMARCE1-219ENST00000583294 QDPRP09417 244 aa5.14□□□□□ -1.59
SMARCE1-219ENST00000583294 HAPLN1P10915 354 aaPredicted RBP5.14□□□□□ -1.59
SMARCE1-219ENST00000583294 PAX1P15863 534 aa5.14□□□□□ -1.59
SMARCE1-219ENST00000583294 EEF1B2P24534 225 aaKnown RBP5.14□□□□□ -1.59
SMARCE1-219ENST00000583294 MAT1AQ00266 395 aaKnown RBP5.14□□□□□ -1.59
SMARCE1-219ENST00000583294 PRKCZQ05513 592 aa5.14□□□□□ -1.59
SMARCE1-219ENST00000583294 PPIGQ13427 754 aaKnown RBP eCLIP5.14□□□□□ -1.59
SMARCE1-219ENST00000583294 VEZF1Q14119 521 aa5.14□□□□□ -1.59
SMARCE1-219ENST00000583294 CA9Q16790 459 aa5.14□□□□□ -1.59
SMARCE1-219ENST00000583294 ZC2HC1CQ53FD0 456 aaPredicted RBP5.14□□□□□ -1.59
SMARCE1-219ENST00000583294 TCTE1Q5JU00 501 aa5.14□□□□□ -1.59
SMARCE1-219ENST00000583294 SPDYCQ5MJ68 293 aa5.14□□□□□ -1.59
SMARCE1-219ENST00000583294 SHQ1Q6PI26 577 aaKnown RBP5.14□□□□□ -1.59
SMARCE1-219ENST00000583294 IL27RAQ6UWB1 636 aa5.14□□□□□ -1.59
SMARCE1-219ENST00000583294 RBMS3Q6XE24 437 aaKnown RBP5.14□□□□□ -1.59
SMARCE1-219ENST00000583294 MARK2Q7KZI7 788 aaKnown RBP5.14□□□□□ -1.59
SMARCE1-219ENST00000583294 ADCK2Q7Z695 626 aa5.14□□□□□ -1.59
SMARCE1-219ENST00000583294 TLK2Q86UE8 772 aa5.14□□□□□ -1.59
SMARCE1-219ENST00000583294 CCAR2Q8N163 923 aaKnown RBP5.14□□□□□ -1.59
SMARCE1-219ENST00000583294 ANKRD13CQ8N6S4 541 aa5.14□□□□□ -1.59
SMARCE1-219ENST00000583294 THAP8Q8NA92 274 aa5.14□□□□□ -1.59
SMARCE1-219ENST00000583294 UHRF2Q96PU4 802 aa5.14□□□□□ -1.59
SMARCE1-219ENST00000583294 PFDN4Q9NQP4 134 aa5.14□□□□□ -1.59
SMARCE1-219ENST00000583294 LIPGQ9Y5X9 500 aa5.14□□□□□ -1.59
SMARCE1-219ENST00000583294 TBCAO75347 108 aaKnown RBP5.13□□□□□ -1.59
SMARCE1-219ENST00000583294 PIGNO95427 931 aa5.13□□□□□ -1.59
SMARCE1-219ENST00000583294 UMODP07911 640 aa5.13□□□□□ -1.59
SMARCE1-219ENST00000583294 IGHV4-38-2P0DP08 117 aa5.13□□□□□ -1.59
SMARCE1-219ENST00000583294 LIFP15018 202 aa5.13□□□□□ -1.59
SMARCE1-219ENST00000583294 LHX1P48742 406 aa5.13□□□□□ -1.59
SMARCE1-219ENST00000583294 NPY4RP50391 375 aa5.13□□□□□ -1.59
SMARCE1-219ENST00000583294 ASCL1P50553 236 aa5.13□□□□□ -1.59
SMARCE1-219ENST00000583294 LIMK1P53667 647 aa5.13□□□□□ -1.59
SMARCE1-219ENST00000583294 B3GALT5-AS1P59052 145 aa5.13□□□□□ -1.59
SMARCE1-219ENST00000583294 PPARDQ03181 441 aa5.13□□□□□ -1.59
SMARCE1-219ENST00000583294 UGP2Q16851 508 aa5.13□□□□□ -1.59
SMARCE1-219ENST00000583294 ITPRIPL2Q3MIP1 535 aa5.13□□□□□ -1.59
SMARCE1-219ENST00000583294 MCMDC2Q4G0Z9 681 aa5.13□□□□□ -1.59
SMARCE1-219ENST00000583294 SFMBT2Q5VUG0 894 aa5.13□□□□□ -1.59
SMARCE1-219ENST00000583294 ERN2Q76MJ5 926 aaKnown RBP5.13□□□□□ -1.59
SMARCE1-219ENST00000583294 TRPT1Q86TN4 253 aaKnown RBP5.13□□□□□ -1.59
SMARCE1-219ENST00000583294 DCUN1D3Q8IWE4 304 aa5.13□□□□□ -1.59
SMARCE1-219ENST00000583294 ZNF611Q8N823 705 aa5.13□□□□□ -1.59
SMARCE1-219ENST00000583294 ZNF383Q8NA42 475 aa5.13□□□□□ -1.59
SMARCE1-219ENST00000583294 IQUBQ8NA54 791 aa5.13□□□□□ -1.59
SMARCE1-219ENST00000583294 KBTBD8Q8NFY9 601 aa5.13□□□□□ -1.59
SMARCE1-219ENST00000583294 GBP5Q96PP8 586 aa5.13□□□□□ -1.59
SMARCE1-219ENST00000583294 URM1Q9BTM9 101 aaKnown RBP5.13□□□□□ -1.59
SMARCE1-219ENST00000583294 KRTAP2-2Q9BYT5 123 aa5.13□□□□□ -1.59
SMARCE1-219ENST00000583294 ZNF701Q9NV72 531 aaPredicted RBP5.13□□□□□ -1.59
SMARCE1-219ENST00000583294 ZDHHC2Q9UIJ5 367 aa5.13□□□□□ -1.59
SMARCE1-219ENST00000583294 NOTCH4Q99466 2003 aa5.13□□□□□ -1.59
SMARCE1-219ENST00000583294 IGLV9-49A0A0B4J1Y8 123 aa5.12□□□□□ -1.59
SMARCE1-219ENST00000583294 ANKRD61A6NGH8 418 aa5.12□□□□□ -1.59
SMARCE1-219ENST00000583294 SLC22A2O15244 555 aa5.12□□□□□ -1.59
SMARCE1-219ENST00000583294 CLIC2O15247 247 aa5.12□□□□□ -1.59
SMARCE1-219ENST00000583294 AP5Z1O43299 807 aa5.12□□□□□ -1.59
SMARCE1-219ENST00000583294 EIF5BO60841 1220 aaKnown RBP5.12□□□□□ -1.59
SMARCE1-219ENST00000583294 RNASEH1O60930 286 aaKnown RBP5.12□□□□□ -1.59
SMARCE1-219ENST00000583294 CA4P22748 312 aa5.12□□□□□ -1.59
SMARCE1-219ENST00000583294 CUL3Q13618 768 aa5.12□□□□□ -1.59
SMARCE1-219ENST00000583294 ZNF273Q14593 569 aa5.12□□□□□ -1.59
SMARCE1-219ENST00000583294 SLC35E4Q6ICL7 350 aa5.12□□□□□ -1.59
SMARCE1-219ENST00000583294 CEACAM20Q6UY09 585 aa5.12□□□□□ -1.59
SMARCE1-219ENST00000583294 MEX3BQ6ZN04 569 aaKnown RBP5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms