RNA–Protein interactions for RNA: ENST00000580784.5

CSNK1D-215, Transcript of casein kinase 1 delta, humanhuman

TSL 1 (best)

Gene CSNK1D, Length 1,081 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-215ENST00000580784 TRIP13Q15645 432 aaPredicted RBP20.55■□□□□ 0.88
CSNK1D-215ENST00000580784 DEFB110Q30KQ9 67 aa20.55■□□□□ 0.88
CSNK1D-215ENST00000580784 CES3Q6UWW8 571 aa20.55■□□□□ 0.88
CSNK1D-215ENST00000580784 PRELID2Q8N945 189 aa20.55■□□□□ 0.88
CSNK1D-215ENST00000580784 N4BP2L2Q92802 583 aaPredicted RBP20.55■□□□□ 0.88
CSNK1D-215ENST00000580784 NLNQ9BYT8 704 aa20.55■□□□□ 0.88
CSNK1D-215ENST00000580784 SPRTNQ9H040 489 aaPredicted RBP20.55■□□□□ 0.88
CSNK1D-215ENST00000580784 P2RY12Q9H244 342 aa20.55■□□□□ 0.88
CSNK1D-215ENST00000580784 PPP2R2CQ9Y2T4 447 aa20.55■□□□□ 0.88
CSNK1D-215ENST00000580784 FLNCQ14315 2725 aa20.54■□□□□ 0.88
CSNK1D-215ENST00000580784 A0A0J9YY10 115 aa20.54■□□□□ 0.88
CSNK1D-215ENST00000580784 H3BMH7 237 aa20.54■□□□□ 0.88
CSNK1D-215ENST00000580784 AP3B1O00203 1094 aa20.54■□□□□ 0.88
CSNK1D-215ENST00000580784 KDM1AO60341 852 aa20.54■□□□□ 0.88
CSNK1D-215ENST00000580784 CTSBP07858 339 aa20.54■□□□□ 0.88
CSNK1D-215ENST00000580784 CHAF1BQ13112 559 aa20.54■□□□□ 0.88
CSNK1D-215ENST00000580784 KIR2DS3Q14952 304 aa20.54■□□□□ 0.88
CSNK1D-215ENST00000580784 CPZQ66K79 652 aa20.54■□□□□ 0.88
CSNK1D-215ENST00000580784 PTRHD1Q6GMV3 140 aaKnown RBP20.54■□□□□ 0.88
CSNK1D-215ENST00000580784 FAM198BQ6UWH4 519 aa20.54■□□□□ 0.88
CSNK1D-215ENST00000580784 ASB18Q6ZVZ8 466 aa20.54■□□□□ 0.88
CSNK1D-215ENST00000580784 FAM20CQ8IXL6 584 aa20.54■□□□□ 0.88
CSNK1D-215ENST00000580784 GPR135Q8IZ08 494 aa20.54■□□□□ 0.88
CSNK1D-215ENST00000580784 C2orf73Q8N5S3 287 aaPredicted RBP20.54■□□□□ 0.88
CSNK1D-215ENST00000580784 KIFC1Q9BW19 673 aa20.54■□□□□ 0.88
CSNK1D-215ENST00000580784 HOMER3Q9NSC5 361 aa20.54■□□□□ 0.88
CSNK1D-215ENST00000580784 SYBUQ9NX95 663 aa20.54■□□□□ 0.88
CSNK1D-215ENST00000580784 TCFL5Q9UL49 500 aa20.54■□□□□ 0.88
CSNK1D-215ENST00000580784 TTC7AQ9ULT0 858 aaPredicted RBP20.54■□□□□ 0.88
CSNK1D-215ENST00000580784 SNX7Q9UNH6 387 aa20.54■□□□□ 0.88
CSNK1D-215ENST00000580784 ARGFXA6NJG6 315 aa20.53■□□□□ 0.88
CSNK1D-215ENST00000580784 NDUFS3O75489 264 aa20.53■□□□□ 0.88
CSNK1D-215ENST00000580784 OR2B3O76000 313 aa20.53■□□□□ 0.88
CSNK1D-215ENST00000580784 SLCO2B1O94956 709 aa20.53■□□□□ 0.88
CSNK1D-215ENST00000580784 VAPBO95292 243 aa20.53■□□□□ 0.88
CSNK1D-215ENST00000580784 PDGFAP04085 211 aa20.53■□□□□ 0.88
CSNK1D-215ENST00000580784 TPSB2P20231 275 aa20.53■□□□□ 0.88
CSNK1D-215ENST00000580784 ARNTP27540 789 aa20.53■□□□□ 0.88
CSNK1D-215ENST00000580784 PKLRP30613 574 aa20.53■□□□□ 0.88
CSNK1D-215ENST00000580784 RAB28P51157 221 aa20.53■□□□□ 0.88
CSNK1D-215ENST00000580784 KLRB1Q12918 225 aa20.53■□□□□ 0.88
CSNK1D-215ENST00000580784 GRB7Q14451 532 aa20.53■□□□□ 0.88
CSNK1D-215ENST00000580784 TPSAB1Q15661 275 aa20.53■□□□□ 0.88
CSNK1D-215ENST00000580784 KYNUQ16719 465 aa20.53■□□□□ 0.88
CSNK1D-215ENST00000580784 SLC5A12Q1EHB4 618 aa20.53■□□□□ 0.88
CSNK1D-215ENST00000580784 LRRC8BQ6P9F7 803 aa20.53■□□□□ 0.88
CSNK1D-215ENST00000580784 LINC01555Q8NAE3 123 aa20.53■□□□□ 0.88
CSNK1D-215ENST00000580784 ADAMTS17Q8TE56 1095 aa20.53■□□□□ 0.88
CSNK1D-215ENST00000580784 MFSD3Q96ES6 412 aa20.53■□□□□ 0.88
CSNK1D-215ENST00000580784 IL17FQ96PD4 163 aa20.53■□□□□ 0.88
CSNK1D-215ENST00000580784 MENTQ9BUN1 341 aa20.53■□□□□ 0.88
CSNK1D-215ENST00000580784 CHRNA10Q9GZZ6 450 aa20.53■□□□□ 0.88
CSNK1D-215ENST00000580784 KLHL20Q9Y2M5 609 aa20.53■□□□□ 0.88
CSNK1D-215ENST00000580784 GOLGA8KD6RF30 607 aa20.52■□□□□ 0.88
CSNK1D-215ENST00000580784 GOLGA8TH3BQL2 631 aa20.52■□□□□ 0.88
CSNK1D-215ENST00000580784 AVILO75366 819 aa20.52■□□□□ 0.88
CSNK1D-215ENST00000580784 HBQ1P09105 142 aa20.52■□□□□ 0.88
CSNK1D-215ENST00000580784 CBSLP0DN79 551 aa20.52■□□□□ 0.88
CSNK1D-215ENST00000580784 CD9P21926 228 aa20.52■□□□□ 0.88
CSNK1D-215ENST00000580784 CBSP35520 551 aa20.52■□□□□ 0.88
CSNK1D-215ENST00000580784 PTGIRP43119 386 aa20.52■□□□□ 0.88
CSNK1D-215ENST00000580784 VPS41P49754 854 aa20.52■□□□□ 0.88
CSNK1D-215ENST00000580784 CCL11P51671 97 aa20.52■□□□□ 0.88
CSNK1D-215ENST00000580784 CDK16Q00536 496 aa20.52■□□□□ 0.88
CSNK1D-215ENST00000580784 IGFBP7Q16270 282 aa20.52■□□□□ 0.88
CSNK1D-215ENST00000580784 ZNF385CQ66K41 422 aaPredicted RBP20.52■□□□□ 0.88
CSNK1D-215ENST00000580784 UNC5DQ6UXZ4 953 aa20.52■□□□□ 0.88
CSNK1D-215ENST00000580784 MPP5Q8N3R9 675 aa20.52■□□□□ 0.88
CSNK1D-215ENST00000580784 DNAJC22Q8N4W6 341 aa20.52■□□□□ 0.88
CSNK1D-215ENST00000580784 TEX19Q8NA77 164 aa20.52■□□□□ 0.88
CSNK1D-215ENST00000580784 DPH2Q9BQC3 489 aaPredicted RBP20.52■□□□□ 0.88
CSNK1D-215ENST00000580784 ING2Q9H160 280 aa20.52■□□□□ 0.88
CSNK1D-215ENST00000580784 GNPTGQ9UJJ9 305 aa20.52■□□□□ 0.88
CSNK1D-215ENST00000580784 RPN2P04844 631 aa20.51■□□□□ 0.87
CSNK1D-215ENST00000580784 AGXTP21549 392 aa20.51■□□□□ 0.87
CSNK1D-215ENST00000580784 EIF3BP55884 814 aaKnown RBP20.51■□□□□ 0.87
CSNK1D-215ENST00000580784 NCF4Q15080 339 aa20.51■□□□□ 0.87
CSNK1D-215ENST00000580784 TMED2Q15363 201 aa20.51■□□□□ 0.87
CSNK1D-215ENST00000580784 C1orf189Q5VU69 101 aa20.51■□□□□ 0.87
CSNK1D-215ENST00000580784 TTC27Q6P3X3 843 aa20.51■□□□□ 0.87
CSNK1D-215ENST00000580784 DCUN1D3Q8IWE4 304 aa20.51■□□□□ 0.87
CSNK1D-215ENST00000580784 OTUD6BQ8N6M0 293 aa20.51■□□□□ 0.87
CSNK1D-215ENST00000580784 PANX3Q96QZ0 392 aa20.51■□□□□ 0.87
CSNK1D-215ENST00000580784 MRM3Q9HC36 420 aaKnown RBP20.51■□□□□ 0.87
CSNK1D-215ENST00000580784 ACSS2Q9NR19 701 aa20.51■□□□□ 0.87
CSNK1D-215ENST00000580784 SOX13Q9UN79 622 aa20.51■□□□□ 0.87
CSNK1D-215ENST00000580784 AP1M2Q9Y6Q5 423 aa20.51■□□□□ 0.87
CSNK1D-215ENST00000580784 ANKRD12Q6UB98 2062 aa20.5■□□□□ 0.87
CSNK1D-215ENST00000580784 ATXN8OSP0DMR3 200 aa20.5■□□□□ 0.87
CSNK1D-215ENST00000580784 MAGP20916 626 aa20.5■□□□□ 0.87
CSNK1D-215ENST00000580784 RPS3P23396 243 aaKnown RBP eCLIP20.5■□□□□ 0.87
CSNK1D-215ENST00000580784 GPS1Q13098 491 aa20.5■□□□□ 0.87
CSNK1D-215ENST00000580784 KCNJ11Q14654 390 aa20.5■□□□□ 0.87
CSNK1D-215ENST00000580784 CTSL3PQ5NE16 218 aa20.5■□□□□ 0.87
CSNK1D-215ENST00000580784 SDCCAG8Q86SQ7 713 aaPredicted RBP20.5■□□□□ 0.87
CSNK1D-215ENST00000580784 TAX1BP1Q86VP1 789 aa20.5■□□□□ 0.87
CSNK1D-215ENST00000580784 LRRC6Q86X45 466 aa20.5■□□□□ 0.87
CSNK1D-215ENST00000580784 ZNF655Q8N720 491 aaPredicted RBP20.5■□□□□ 0.87
CSNK1D-215ENST00000580784 MS4A14Q96JA4 679 aa20.5■□□□□ 0.87
CSNK1D-215ENST00000580784 BIRC8Q96P09 236 aa20.5■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms