RNA–Protein interactions for RNA: ENST00000577539.1

VAPA-203, Transcript of VAMP associated protein A, humanhuman

Gene VAPA, Length 3,760 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-203ENST00000577539 AQP12BA6NM10 295 aa5.26□□□□□ -1.57
VAPA-203ENST00000577539 ZNF891A8MT65 544 aaPredicted RBP5.26□□□□□ -1.57
VAPA-203ENST00000577539 H7C4K7 107 aa5.26□□□□□ -1.57
VAPA-203ENST00000577539 FXYD1O00168 92 aa5.26□□□□□ -1.57
VAPA-203ENST00000577539 GNGT2O14610 69 aa5.26□□□□□ -1.57
VAPA-203ENST00000577539 CA12O43570 354 aa5.26□□□□□ -1.57
VAPA-203ENST00000577539 CLDN11O75508 207 aa5.26□□□□□ -1.57
VAPA-203ENST00000577539 TRMUO75648 421 aaKnown RBP5.26□□□□□ -1.57
VAPA-203ENST00000577539 TMCC1O94876 653 aa5.26□□□□□ -1.57
VAPA-203ENST00000577539 ESRRBO95718 433 aa5.26□□□□□ -1.57
VAPA-203ENST00000577539 MBL2P11226 248 aaPredicted RBP5.26□□□□□ -1.57
VAPA-203ENST00000577539 GDF5P43026 501 aa5.26□□□□□ -1.57
VAPA-203ENST00000577539 HSPA7P48741 367 aa5.26□□□□□ -1.57
VAPA-203ENST00000577539 SGSHP51688 502 aa5.26□□□□□ -1.57
VAPA-203ENST00000577539 ZNF140P52738 457 aaPredicted RBP5.26□□□□□ -1.57
VAPA-203ENST00000577539 TRAF2Q12933 501 aa5.26□□□□□ -1.57
VAPA-203ENST00000577539 SUZ12Q15022 739 aaKnown RBP5.26□□□□□ -1.57
VAPA-203ENST00000577539 IMPG1Q17R60 797 aa5.26□□□□□ -1.57
VAPA-203ENST00000577539 AASDHQ4L235 1098 aaPredicted RBP5.26□□□□□ -1.57
VAPA-203ENST00000577539 C6orf136Q5SQH8 315 aa5.26□□□□□ -1.57
VAPA-203ENST00000577539 HACD2Q6Y1H2 254 aa5.26□□□□□ -1.57
VAPA-203ENST00000577539 SPATA19Q7Z5L4 167 aa5.26□□□□□ -1.57
VAPA-203ENST00000577539 GPR141Q7Z602 305 aa5.26□□□□□ -1.57
VAPA-203ENST00000577539 MILR1Q7Z6M3 343 aa5.26□□□□□ -1.57
VAPA-203ENST00000577539 AQP12AQ8IXF9 295 aa5.26□□□□□ -1.57
VAPA-203ENST00000577539 CLEC4FQ8N1N0 589 aa5.26□□□□□ -1.57
VAPA-203ENST00000577539 GPR150Q8NGU9 434 aa5.26□□□□□ -1.57
VAPA-203ENST00000577539 NCLNQ969V3 563 aa5.26□□□□□ -1.57
VAPA-203ENST00000577539 CENPNQ96H22 339 aaPredicted RBP5.26□□□□□ -1.57
VAPA-203ENST00000577539 NSMCE3Q96MG7 304 aa5.26□□□□□ -1.57
VAPA-203ENST00000577539 ZNF599Q96NL3 588 aa5.26□□□□□ -1.57
VAPA-203ENST00000577539 ZBTB18Q99592 522 aa5.26□□□□□ -1.57
VAPA-203ENST00000577539 SMAD5Q99717 465 aaKnown RBP5.26□□□□□ -1.57
VAPA-203ENST00000577539 MGME1Q9BQP7 344 aa5.26□□□□□ -1.57
VAPA-203ENST00000577539 CORO1BQ9BR76 489 aa5.26□□□□□ -1.57
VAPA-203ENST00000577539 TDRD1Q9BXT4 1180 aaKnown RBP5.26□□□□□ -1.57
VAPA-203ENST00000577539 ING2Q9H160 280 aa5.26□□□□□ -1.57
VAPA-203ENST00000577539 ZFP14Q9HCL3 533 aa5.26□□□□□ -1.57
VAPA-203ENST00000577539 SMOXQ9NWM0 555 aa5.26□□□□□ -1.57
VAPA-203ENST00000577539 ETAA1Q9NY74 926 aa5.26□□□□□ -1.57
VAPA-203ENST00000577539 PLK2Q9NYY3 685 aa5.26□□□□□ -1.57
VAPA-203ENST00000577539 WWOXQ9NZC7 414 aa5.26□□□□□ -1.57
VAPA-203ENST00000577539 ACTR3BQ9P1U1 418 aa5.26□□□□□ -1.57
VAPA-203ENST00000577539 RSL24D1Q9UHA3 163 aaKnown RBP5.26□□□□□ -1.57
VAPA-203ENST00000577539 SARDHQ9UL12 918 aa5.26□□□□□ -1.57
VAPA-203ENST00000577539 POLR3HQ9Y535 204 aaPredicted RBP5.26□□□□□ -1.57
VAPA-203ENST00000577539 FADS3Q9Y5Q0 445 aa5.26□□□□□ -1.57
VAPA-203ENST00000577539 CROCCQ5TZA2 2017 aa5.25□□□□□ -1.57
VAPA-203ENST00000577539 H3BNH8 94 aa5.25□□□□□ -1.57
VAPA-203ENST00000577539 PRMT5O14744 637 aaPredicted RBP5.25□□□□□ -1.57
VAPA-203ENST00000577539 COCHO43405 550 aa5.25□□□□□ -1.57
VAPA-203ENST00000577539 TGM5O43548 720 aa5.25□□□□□ -1.57
VAPA-203ENST00000577539 TBL1XO60907 577 aa5.25□□□□□ -1.57
VAPA-203ENST00000577539 PFDN1O60925 122 aa5.25□□□□□ -1.57
VAPA-203ENST00000577539 SLITRK5O94991 958 aa5.25□□□□□ -1.57
VAPA-203ENST00000577539 KLKB1P03952 638 aa5.25□□□□□ -1.57
VAPA-203ENST00000577539 ATF6P18850 670 aa5.25□□□□□ -1.57
VAPA-203ENST00000577539 UGT1A1P22309 533 aa5.25□□□□□ -1.57
VAPA-203ENST00000577539 UGT1A4P22310 534 aa5.25□□□□□ -1.57
VAPA-203ENST00000577539 PCSK6P29122 969 aa5.25□□□□□ -1.57
VAPA-203ENST00000577539 UGT1A3P35503 534 aa5.25□□□□□ -1.57
VAPA-203ENST00000577539 UGT1A5P35504 534 aa5.25□□□□□ -1.57
VAPA-203ENST00000577539 YAP1P46937 504 aaKnown RBP5.25□□□□□ -1.57
VAPA-203ENST00000577539 ALDH7A1P49419 539 aaKnown RBP5.25□□□□□ -1.57
VAPA-203ENST00000577539 RPL38P63173 70 aaKnown RBP5.25□□□□□ -1.57
VAPA-203ENST00000577539 CREB5Q02930 508 aa5.25□□□□□ -1.57
VAPA-203ENST00000577539 ACVR1Q04771 509 aa5.25□□□□□ -1.57
VAPA-203ENST00000577539 MERTKQ12866 999 aa5.25□□□□□ -1.57
VAPA-203ENST00000577539 TMED1Q13445 227 aa5.25□□□□□ -1.57
VAPA-203ENST00000577539 CDH18Q13634 790 aa5.25□□□□□ -1.57
VAPA-203ENST00000577539 NEDD8Q15843 81 aa5.25□□□□□ -1.57
VAPA-203ENST00000577539 TRIM71Q2Q1W2 868 aaKnown RBP5.25□□□□□ -1.57
VAPA-203ENST00000577539 AP5B1Q2VPB7 878 aa5.25□□□□□ -1.57
VAPA-203ENST00000577539 AARS2Q5JTZ9 985 aaKnown RBP5.25□□□□□ -1.57
VAPA-203ENST00000577539 GLYATQ6IB77 296 aa5.25□□□□□ -1.57
VAPA-203ENST00000577539 LRRC8DQ7L1W4 858 aa5.25□□□□□ -1.57
VAPA-203ENST00000577539 CHST15Q7LFX5 561 aaPredicted RBP5.25□□□□□ -1.57
VAPA-203ENST00000577539 GALNT7Q86SF2 657 aa5.25□□□□□ -1.57
VAPA-203ENST00000577539 STK32CQ86UX6 486 aa5.25□□□□□ -1.57
VAPA-203ENST00000577539 CMIPQ8IY22 773 aa5.25□□□□□ -1.57
VAPA-203ENST00000577539 OR8H2Q8N162 312 aa5.25□□□□□ -1.57
VAPA-203ENST00000577539 FIBCD1Q8N539 461 aa5.25□□□□□ -1.57
VAPA-203ENST00000577539 MINDY1Q8N5J2 469 aa5.25□□□□□ -1.57
VAPA-203ENST00000577539 TRPV3Q8NET8 790 aa5.25□□□□□ -1.57
VAPA-203ENST00000577539 CLHC1Q8NHS4 586 aa5.25□□□□□ -1.57
VAPA-203ENST00000577539 FBXO30Q8TB52 745 aa5.25□□□□□ -1.57
VAPA-203ENST00000577539 RAET1EQ8TD07 263 aa5.25□□□□□ -1.57
VAPA-203ENST00000577539 MIPOL1Q8TD10 442 aa5.25□□□□□ -1.57
VAPA-203ENST00000577539 FIG4Q92562 907 aa5.25□□□□□ -1.57
VAPA-203ENST00000577539 MTFMTQ96DP5 389 aaKnown RBP5.25□□□□□ -1.57
VAPA-203ENST00000577539 ASB8Q9H765 288 aa5.25□□□□□ -1.57
VAPA-203ENST00000577539 AIG1Q9NVV5 245 aa5.25□□□□□ -1.57
VAPA-203ENST00000577539 RNF186Q9NXI6 227 aa5.25□□□□□ -1.57
VAPA-203ENST00000577539 ZNHIT2Q9UHR6 403 aa5.25□□□□□ -1.57
VAPA-203ENST00000577539 PCTPQ9UKL6 214 aa5.25□□□□□ -1.57
VAPA-203ENST00000577539 HEMK1Q9Y5R4 338 aaPredicted RBP5.25□□□□□ -1.57
VAPA-203ENST00000577539 GPR45Q9Y5Y3 372 aa5.25□□□□□ -1.57
VAPA-203ENST00000577539 A0A087WXM4 84 aa5.25□□□□□ -1.57
VAPA-203ENST00000577539 A0A1B0GVM2 712 aa5.25□□□□□ -1.57
VAPA-203ENST00000577539 KANSL1LA0AUZ9 987 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms