RNA–Protein interactions for RNA: ENST00000576218.5

SMG6-220, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 902 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-220ENST00000576218 PKLRP30613 574 aa14.77□□□□□ -0.05
SMG6-220ENST00000576218 ELK3P41970 407 aa14.77□□□□□ -0.05
SMG6-220ENST00000576218 MPP1Q00013 466 aa14.77□□□□□ -0.05
SMG6-220ENST00000576218 KIR2DS3Q14952 304 aa14.77□□□□□ -0.05
SMG6-220ENST00000576218 ZNF789Q5FWF6 425 aa14.77□□□□□ -0.05
SMG6-220ENST00000576218 KIAA1614Q5VZ46 1190 aa14.77□□□□□ -0.05
SMG6-220ENST00000576218 HIBCHQ6NVY1 386 aaPredicted RBP14.77□□□□□ -0.05
SMG6-220ENST00000576218 TRIM73Q86UV7 250 aa14.77□□□□□ -0.05
SMG6-220ENST00000576218 AGGF1Q8N302 714 aaeCLIP14.77□□□□□ -0.052e-11■■■■□ 26.1
SMG6-220ENST00000576218 SPATA4Q8NEY3 305 aa14.77□□□□□ -0.05
SMG6-220ENST00000576218 OR8K5Q8NH50 307 aa14.77□□□□□ -0.05
SMG6-220ENST00000576218 ZNF592Q92610 1267 aa14.77□□□□□ -0.05
SMG6-220ENST00000576218 RAD51AP1Q96B01 352 aa14.77□□□□□ -0.05
SMG6-220ENST00000576218 TRIM44Q96DX7 344 aaPredicted RBP14.77□□□□□ -0.05
SMG6-220ENST00000576218 ARHGAP9Q9BRR9 750 aa14.77□□□□□ -0.05
SMG6-220ENST00000576218 DPH5Q9H2P9 285 aa14.77□□□□□ -0.05
SMG6-220ENST00000576218 LATS2Q9NRM7 1088 aa14.77□□□□□ -0.05
SMG6-220ENST00000576218 CAMSAP3Q9P1Y5 1249 aaPredicted RBP14.77□□□□□ -0.05
SMG6-220ENST00000576218 RUVBL2Q9Y230 463 aaKnown RBP14.77□□□□□ -0.05
SMG6-220ENST00000576218 BTRCQ9Y297 605 aa14.77□□□□□ -0.05
SMG6-220ENST00000576218 SNX24Q9Y343 169 aa14.77□□□□□ -0.05
SMG6-220ENST00000576218 UTP11Q9Y3A2 253 aaKnown RBP14.77□□□□□ -0.05
SMG6-220ENST00000576218 TMEM184BQ9Y519 407 aaPredicted RBP14.77□□□□□ -0.05
SMG6-220ENST00000576218 PCDHGA4Q9Y5G9 962 aa14.77□□□□□ -0.05
SMG6-220ENST00000576218 COMMD10Q9Y6G5 202 aa14.77□□□□□ -0.05
SMG6-220ENST00000576218 A0A0J9YY10 115 aa14.76□□□□□ -0.05
SMG6-220ENST00000576218 FANCGO15287 622 aa14.76□□□□□ -0.05
SMG6-220ENST00000576218 SCRG1O75711 98 aa14.76□□□□□ -0.05
SMG6-220ENST00000576218 DLGAP3O95886 979 aa14.76□□□□□ -0.05
SMG6-220ENST00000576218 PVRP15151 417 aa14.76□□□□□ -0.05
SMG6-220ENST00000576218 CYP2A7P20853 494 aa14.76□□□□□ -0.05
SMG6-220ENST00000576218 ATP5DP30049 168 aa14.76□□□□□ -0.05
SMG6-220ENST00000576218 MRPS25P82663 173 aaKnown RBP14.76□□□□□ -0.05
SMG6-220ENST00000576218 ABHD18Q0P651 414 aa14.76□□□□□ -0.05
SMG6-220ENST00000576218 PDIA2Q13087 525 aaKnown RBP14.76□□□□□ -0.05
SMG6-220ENST00000576218 TSTA3Q13630 321 aaPredicted RBP14.76□□□□□ -0.05
SMG6-220ENST00000576218 MSS51Q4VC12 460 aa14.76□□□□□ -0.05
SMG6-220ENST00000576218 UGT3A1Q6NUS8 523 aa14.76□□□□□ -0.05
SMG6-220ENST00000576218 ANKMY2Q8IV38 441 aa14.76□□□□□ -0.05
SMG6-220ENST00000576218 GPR135Q8IZ08 494 aa14.76□□□□□ -0.05
SMG6-220ENST00000576218 UNC5BQ8IZJ1 945 aa14.76□□□□□ -0.05
SMG6-220ENST00000576218 C2orf73Q8N5S3 287 aaPredicted RBP14.76□□□□□ -0.05
SMG6-220ENST00000576218 C19orf47Q8N9M1 422 aaKnown RBP14.76□□□□□ -0.05
SMG6-220ENST00000576218 SLC22A18Q96BI1 424 aa14.76□□□□□ -0.05
SMG6-220ENST00000576218 LRRC39Q96DD0 335 aa14.76□□□□□ -0.05
SMG6-220ENST00000576218 CERS2Q96G23 380 aa14.76□□□□□ -0.05
SMG6-220ENST00000576218 PWWP2AQ96N64 755 aa14.76□□□□□ -0.05
SMG6-220ENST00000576218 IL17FQ96PD4 163 aa14.76□□□□□ -0.05
SMG6-220ENST00000576218 SYTL2Q9HCH5 934 aa14.76□□□□□ -0.05
SMG6-220ENST00000576218 FAM114A2Q9NRY5 505 aa14.76□□□□□ -0.05
SMG6-220ENST00000576218 SEMA5BQ9P283 1151 aa14.76□□□□□ -0.05
SMG6-220ENST00000576218 TRMT6Q9UJA5 497 aaKnown RBP14.76□□□□□ -0.05
SMG6-220ENST00000576218 NFS1Q9Y697 457 aa14.76□□□□□ -0.05
SMG6-220ENST00000576218 LAMA5O15230 3695 aa14.75□□□□□ -0.05
SMG6-220ENST00000576218 ZNF891A8MT65 544 aaPredicted RBP14.75□□□□□ -0.05
SMG6-220ENST00000576218 RASGRF2O14827 1237 aa14.75□□□□□ -0.05
SMG6-220ENST00000576218 CPNE3O75131 537 aaKnown RBP14.75□□□□□ -0.05
SMG6-220ENST00000576218 KATNA1O75449 491 aa14.75□□□□□ -0.05
SMG6-220ENST00000576218 CATP04040 527 aaKnown RBP14.75□□□□□ -0.05
SMG6-220ENST00000576218 NTRK1P04629 796 aa14.75□□□□□ -0.05
SMG6-220ENST00000576218 ZNF28P17035 718 aa14.75□□□□□ -0.05
SMG6-220ENST00000576218 CD9P21926 228 aa14.75□□□□□ -0.05
SMG6-220ENST00000576218 IVDP26440 423 aa14.75□□□□□ -0.05
SMG6-220ENST00000576218 RPL21P46778 160 aaKnown RBP14.75□□□□□ -0.05
SMG6-220ENST00000576218 CARSP49589 748 aaKnown RBP14.75□□□□□ -0.05
SMG6-220ENST00000576218 CUL1Q13616 776 aa14.75□□□□□ -0.05
SMG6-220ENST00000576218 MAP7Q14244 749 aa14.75□□□□□ -0.05
SMG6-220ENST00000576218 KYNUQ16719 465 aa14.75□□□□□ -0.05
SMG6-220ENST00000576218 KLHL38Q2WGJ6 581 aa14.75□□□□□ -0.05
SMG6-220ENST00000576218 PWWP2BQ6NUJ5 590 aa14.75□□□□□ -0.05
SMG6-220ENST00000576218 KCNJ9Q92806 393 aa14.75□□□□□ -0.05
SMG6-220ENST00000576218 CLIP3Q96DZ5 547 aa14.75□□□□□ -0.05
SMG6-220ENST00000576218 TCTN2Q96GX1 697 aa14.75□□□□□ -0.05
SMG6-220ENST00000576218 FCRL4Q96PJ5 515 aa14.75□□□□□ -0.05
SMG6-220ENST00000576218 TRAPPC9Q96Q05 1148 aa14.75□□□□□ -0.05
SMG6-220ENST00000576218 OR2A14Q96R47 310 aa14.75□□□□□ -0.05
SMG6-220ENST00000576218 PITPNM3Q9BZ71 974 aa14.75□□□□□ -0.05
SMG6-220ENST00000576218 RAB17Q9H0T7 212 aa14.75□□□□□ -0.05
SMG6-220ENST00000576218 INTS7Q9NVH2 962 aaKnown RBP14.75□□□□□ -0.05
SMG6-220ENST00000576218 SPHK1Q9NYA1 384 aa14.75□□□□□ -0.05
SMG6-220ENST00000576218 SERTAD3Q9UJW9 196 aa14.75□□□□□ -0.05
SMG6-220ENST00000576218 LOC101059948A0A1B0GTJ6 334 aa14.74□□□□□ -0.05
SMG6-220ENST00000576218 PABPN1LA6NDY0 278 aaKnown RBP14.74□□□□□ -0.05
SMG6-220ENST00000576218 ERVH48-1M5A8F1 160 aa14.74□□□□□ -0.05
SMG6-220ENST00000576218 RAD51CO43502 376 aa14.74□□□□□ -0.05
SMG6-220ENST00000576218 URI1O94763 535 aaPredicted RBP14.74□□□□□ -0.05
SMG6-220ENST00000576218 HAUS5O94927 633 aa14.74□□□□□ -0.05
SMG6-220ENST00000576218 C1orf105O95561 183 aa14.74□□□□□ -0.05
SMG6-220ENST00000576218 SYF2O95926 243 aaKnown RBP14.74□□□□□ -0.05
SMG6-220ENST00000576218 KLK3P07288 261 aaPredicted RBP14.74□□□□□ -0.05
SMG6-220ENST00000576218 PRKAR1AP10644 381 aa14.74□□□□□ -0.05
SMG6-220ENST00000576218 DLSTP36957 453 aa14.74□□□□□ -0.05
SMG6-220ENST00000576218 STAT5AP42229 794 aa14.74□□□□□ -0.05
SMG6-220ENST00000576218 ITGA1P56199 1179 aa14.74□□□□□ -0.05
SMG6-220ENST00000576218 SF1Q15637 639 aaKnown RBP14.74□□□□□ -0.05
SMG6-220ENST00000576218 SLC5A12Q1EHB4 618 aa14.74□□□□□ -0.05
SMG6-220ENST00000576218 ACSBG2Q5FVE4 666 aa14.74□□□□□ -0.05
SMG6-220ENST00000576218 CAPN12Q6ZSI9 719 aa14.74□□□□□ -0.05
SMG6-220ENST00000576218 TIPARPQ7Z3E1 657 aaKnown RBP14.74□□□□□ -0.05
SMG6-220ENST00000576218 PALM2Q8IXS6 379 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms