RNA–Protein interactions for RNA: ENST00000576033.5

CCDC40-215, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 466 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-215ENST00000576033 DLG3Q92796 817 aa7.68□□□□□ -1.18
CCDC40-215ENST00000576033 TMEM159Q96B96 161 aa7.68□□□□□ -1.18
CCDC40-215ENST00000576033 PRR11Q96HE9 360 aaPredicted RBP7.68□□□□□ -1.18
CCDC40-215ENST00000576033 CYTH2Q99418 400 aa7.68□□□□□ -1.18
CCDC40-215ENST00000576033 NAT9Q9BTE0 207 aa7.68□□□□□ -1.18
CCDC40-215ENST00000576033 KIR3DX1Q9H7L2 352 aa7.68□□□□□ -1.18
CCDC40-215ENST00000576033 APMAPQ9HDC9 416 aa7.68□□□□□ -1.18
CCDC40-215ENST00000576033 SSU72Q9NP77 194 aaKnown RBP7.68□□□□□ -1.18
CCDC40-215ENST00000576033 OCIAD1Q9NX40 245 aa7.68□□□□□ -1.18
CCDC40-215ENST00000576033 NCKIPSDQ9NZQ3 722 aa7.68□□□□□ -1.18
CCDC40-215ENST00000576033 SENP1Q9P0U3 644 aa7.68□□□□□ -1.18
CCDC40-215ENST00000576033 ZFATQ9P243 1243 aa7.68□□□□□ -1.18
CCDC40-215ENST00000576033 PSMC3IPQ9P2W1 217 aaPredicted RBP7.68□□□□□ -1.18
CCDC40-215ENST00000576033 ZNF180Q9UJW8 692 aa7.68□□□□□ -1.18
CCDC40-215ENST00000576033 ANGPTL2Q9UKU9 493 aa7.68□□□□□ -1.18
CCDC40-215ENST00000576033 ACSL5Q9ULC5 683 aa7.68□□□□□ -1.18
CCDC40-215ENST00000576033 ASF1AQ9Y294 204 aa7.68□□□□□ -1.18
CCDC40-215ENST00000576033 SDK2Q58EX2 2172 aa7.68□□□□□ -1.18
CCDC40-215ENST00000576033 APC2O95996 2303 aa7.68□□□□□ -1.18
CCDC40-215ENST00000576033 ANKRD11Q6UB99 2663 aaPredicted RBP7.67□□□□□ -1.18
CCDC40-215ENST00000576033 IGHV5-51A0A0C4DH38 117 aa7.67□□□□□ -1.18
CCDC40-215ENST00000576033 HMX2A2RU54 273 aa7.67□□□□□ -1.18
CCDC40-215ENST00000576033 NPEPPSL1A6NEC2 478 aa7.67□□□□□ -1.18
CCDC40-215ENST00000576033 OR5K3A6NET4 321 aa7.67□□□□□ -1.18
CCDC40-215ENST00000576033 TRABD2BA6NFA1 517 aa7.67□□□□□ -1.18
CCDC40-215ENST00000576033 SMIM23A6NLE4 172 aa7.67□□□□□ -1.18
CCDC40-215ENST00000576033 IFRD1O00458 451 aaPredicted RBP7.67□□□□□ -1.18
CCDC40-215ENST00000576033 CAPN5O15484 640 aaPredicted RBP7.67□□□□□ -1.18
CCDC40-215ENST00000576033 PRPF4O43172 522 aaKnown RBP eCLIP7.67□□□□□ -1.18
CCDC40-215ENST00000576033 HCRTR1O43613 425 aa7.67□□□□□ -1.18
CCDC40-215ENST00000576033 SLCO2B1O94956 709 aa7.67□□□□□ -1.18
CCDC40-215ENST00000576033 C1orf105O95561 183 aa7.67□□□□□ -1.18
CCDC40-215ENST00000576033 CPNE6O95741 557 aa7.67□□□□□ -1.18
CCDC40-215ENST00000576033 APOA4P06727 396 aa7.67□□□□□ -1.18
CCDC40-215ENST00000576033 CTSBP07858 339 aa7.67□□□□□ -1.18
CCDC40-215ENST00000576033 PNLIPP16233 465 aa7.67□□□□□ -1.18
CCDC40-215ENST00000576033 HPDP32754 393 aaPredicted RBP7.67□□□□□ -1.18
CCDC40-215ENST00000576033 ADARP55265 1226 aaKnown RBP7.67□□□□□ -1.18
CCDC40-215ENST00000576033 SH3BP2P78314 561 aa7.67□□□□□ -1.18
CCDC40-215ENST00000576033 GABREP78334 506 aa7.67□□□□□ -1.18
CCDC40-215ENST00000576033 IRF9Q00978 393 aa7.67□□□□□ -1.18
CCDC40-215ENST00000576033 GUCY1A3Q02108 690 aa7.67□□□□□ -1.18
CCDC40-215ENST00000576033 DMTNQ08495 405 aa7.67□□□□□ -1.18
CCDC40-215ENST00000576033 SRSF6Q13247 344 aaKnown RBP7.67□□□□□ -1.18
CCDC40-215ENST00000576033 MPP2Q14168 576 aa7.67□□□□□ -1.18
CCDC40-215ENST00000576033 KRT33BQ14525 404 aa7.67□□□□□ -1.18
CCDC40-215ENST00000576033 TMED2Q15363 201 aa7.67□□□□□ -1.18
CCDC40-215ENST00000576033 FAM219BQ5XKK7 198 aa7.67□□□□□ -1.18
CCDC40-215ENST00000576033 CYHR1Q6ZMK1 362 aa7.67□□□□□ -1.18
CCDC40-215ENST00000576033 TAOK1Q7L7X3 1001 aa7.67□□□□□ -1.18
CCDC40-215ENST00000576033 LRRC6Q86X45 466 aa7.67□□□□□ -1.18
CCDC40-215ENST00000576033 ADGRF3Q8IZF5 1079 aa7.67□□□□□ -1.18
CCDC40-215ENST00000576033 CNPY4Q8N129 248 aa7.67□□□□□ -1.18
CCDC40-215ENST00000576033 OR5K2Q8NHB8 316 aa7.67□□□□□ -1.18
CCDC40-215ENST00000576033 FLVCR1-AS1Q8TAF5 88 aa7.67□□□□□ -1.18
CCDC40-215ENST00000576033 CALML6Q8TD86 181 aa7.67□□□□□ -1.18
CCDC40-215ENST00000576033 KCNJ9Q92806 393 aa7.67□□□□□ -1.18
CCDC40-215ENST00000576033 LINGO1Q96FE5 620 aa7.67□□□□□ -1.18
CCDC40-215ENST00000576033 AHCYL2Q96HN2 611 aaKnown RBP7.67□□□□□ -1.18
CCDC40-215ENST00000576033 VPS39Q96JC1 886 aa7.67□□□□□ -1.18
CCDC40-215ENST00000576033 CNTNAP3BQ96NU0 1288 aa7.67□□□□□ -1.18
CCDC40-215ENST00000576033 DEPDC7Q96QD5 511 aa7.67□□□□□ -1.18
CCDC40-215ENST00000576033 PANX3Q96QZ0 392 aa7.67□□□□□ -1.18
CCDC40-215ENST00000576033 TCF12Q99081 682 aa7.67□□□□□ -1.18
CCDC40-215ENST00000576033 PAFAH2Q99487 392 aa7.67□□□□□ -1.18
CCDC40-215ENST00000576033 TTC1Q99614 292 aa7.67□□□□□ -1.18
CCDC40-215ENST00000576033 RBBP8Q99708 897 aa7.67□□□□□ -1.18
CCDC40-215ENST00000576033 CTRCQ99895 268 aa7.67□□□□□ -1.18
CCDC40-215ENST00000576033 CNTNAP3Q9BZ76 1288 aa7.67□□□□□ -1.18
CCDC40-215ENST00000576033 CENPHQ9H3R5 247 aa7.67□□□□□ -1.18
CCDC40-215ENST00000576033 STN1Q9H668 368 aaKnown RBP7.67□□□□□ -1.18
CCDC40-215ENST00000576033 SYNPO2LQ9H987 977 aa7.67□□□□□ -1.18
CCDC40-215ENST00000576033 FOXJ2Q9P0K8 574 aa7.67□□□□□ -1.18
CCDC40-215ENST00000576033 PISDQ9UG56 409 aa7.67□□□□□ -1.18
CCDC40-215ENST00000576033 TRMT6Q9UJA5 497 aaKnown RBP7.67□□□□□ -1.18
CCDC40-215ENST00000576033 SH2B3Q9UQQ2 575 aa7.67□□□□□ -1.18
CCDC40-215ENST00000576033 LOXL2Q9Y4K0 774 aa7.67□□□□□ -1.18
CCDC40-215ENST00000576033 NEUROG3Q9Y4Z2 214 aa7.67□□□□□ -1.18
CCDC40-215ENST00000576033 MN1Q10571 1320 aaPredicted RBP7.67□□□□□ -1.18
CCDC40-215ENST00000576033 NBEAQ8NFP9 2946 aa7.66□□□□□ -1.18
CCDC40-215ENST00000576033 TMEM120BA0PK00 339 aa7.66□□□□□ -1.18
CCDC40-215ENST00000576033 GSAPA4D1B5 854 aa7.66□□□□□ -1.18
CCDC40-215ENST00000576033 OR5K4A6NMS3 321 aa7.66□□□□□ -1.18
CCDC40-215ENST00000576033 CDC7O00311 574 aa7.66□□□□□ -1.18
CCDC40-215ENST00000576033 QSOX1O00391 747 aa7.66□□□□□ -1.18
CCDC40-215ENST00000576033 TLX3O43711 291 aaPredicted RBP7.66□□□□□ -1.18
CCDC40-215ENST00000576033 TYROBPO43914 113 aa7.66□□□□□ -1.18
CCDC40-215ENST00000576033 BRINP1O60477 761 aa7.66□□□□□ -1.18
CCDC40-215ENST00000576033 KCNJ13O60928 360 aa7.66□□□□□ -1.18
CCDC40-215ENST00000576033 VPS26AO75436 327 aa7.66□□□□□ -1.18
CCDC40-215ENST00000576033 RASSF9O75901 435 aa7.66□□□□□ -1.18
CCDC40-215ENST00000576033 WISP3O95389 354 aaPredicted RBP7.66□□□□□ -1.18
CCDC40-215ENST00000576033 GSTM1P09488 218 aa7.66□□□□□ -1.18
CCDC40-215ENST00000576033 SLC2A4P14672 509 aa7.66□□□□□ -1.18
CCDC40-215ENST00000576033 CREB1P16220 341 aa7.66□□□□□ -1.18
CCDC40-215ENST00000576033 AMD1P17707 334 aa7.66□□□□□ -1.18
CCDC40-215ENST00000576033 PKLRP30613 574 aa7.66□□□□□ -1.18
CCDC40-215ENST00000576033 PPARGP37231 505 aaPredicted RBP7.66□□□□□ -1.18
CCDC40-215ENST00000576033 GPR3P46089 330 aa7.66□□□□□ -1.18
CCDC40-215ENST00000576033 LIMK2P53671 638 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms