RNA–Protein interactions for RNA: ENST00000575112.5

RPAIN-215, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 3,817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-215ENST00000575112 ALDH9A1P49189 494 aa8.35□□□□□ -1.07
RPAIN-215ENST00000575112 ARSFP54793 590 aa8.35□□□□□ -1.07
RPAIN-215ENST00000575112 NTHL1P78549 312 aa8.35□□□□□ -1.07
RPAIN-215ENST00000575112 CD47Q08722 323 aa8.35□□□□□ -1.07
RPAIN-215ENST00000575112 DMPKQ09013 629 aa8.35□□□□□ -1.07
RPAIN-215ENST00000575112 CCNYL2Q5T2Q4 361 aa8.35□□□□□ -1.07
RPAIN-215ENST00000575112 LCN8Q6JVE9 175 aa8.35□□□□□ -1.07
RPAIN-215ENST00000575112 RETSATQ6NUM9 610 aa8.35□□□□□ -1.07
RPAIN-215ENST00000575112 SLC22A16Q86VW1 577 aa8.35□□□□□ -1.07
RPAIN-215ENST00000575112 TRUB1Q8WWH5 349 aaKnown RBP8.35□□□□□ -1.07
RPAIN-215ENST00000575112 MFSD1Q9H3U5 465 aa8.35□□□□□ -1.07
RPAIN-215ENST00000575112 CSNK1G1Q9HCP0 422 aa8.35□□□□□ -1.07
RPAIN-215ENST00000575112 TREX1Q9NSU2 369 aa8.35□□□□□ -1.07
RPAIN-215ENST00000575112 KIF17Q9P2E2 1029 aa8.35□□□□□ -1.07
RPAIN-215ENST00000575112 MTRRQ9UBK8 725 aa8.35□□□□□ -1.07
RPAIN-215ENST00000575112 TMA7Q9Y2S6 64 aaKnown RBP8.35□□□□□ -1.07
RPAIN-215ENST00000575112 SNX8Q9Y5X2 465 aa8.35□□□□□ -1.07
RPAIN-215ENST00000575112 CACNA1CQ13936 2221 aa8.35□□□□□ -1.07
RPAIN-215ENST00000575112 LOC730098B7Z3J9 87 aa8.35□□□□□ -1.07
RPAIN-215ENST00000575112 ZNF623O75123 536 aa8.35□□□□□ -1.07
RPAIN-215ENST00000575112 STC2O76061 302 aa8.35□□□□□ -1.07
RPAIN-215ENST00000575112 POU2F1P14859 743 aa8.35□□□□□ -1.07
RPAIN-215ENST00000575112 TYMPP19971 482 aa8.35□□□□□ -1.07
RPAIN-215ENST00000575112 FMO3P31513 532 aa8.35□□□□□ -1.07
RPAIN-215ENST00000575112 LEPRP48357 1165 aaKnown RBP8.35□□□□□ -1.07
RPAIN-215ENST00000575112 RPS3AP61247 264 aaKnown RBP8.35□□□□□ -1.07
RPAIN-215ENST00000575112 MEF2AQ02078 507 aaPredicted RBP8.35□□□□□ -1.07
RPAIN-215ENST00000575112 PHKG1Q16816 387 aa8.35□□□□□ -1.07
RPAIN-215ENST00000575112 RFTN2Q52LD8 501 aaPredicted RBP8.35□□□□□ -1.07
RPAIN-215ENST00000575112 SPANXN4Q5MJ08 99 aa8.35□□□□□ -1.07
RPAIN-215ENST00000575112 ZNF773Q6PK81 442 aa8.35□□□□□ -1.07
RPAIN-215ENST00000575112 BBS7Q8IWZ6 715 aa8.35□□□□□ -1.07
RPAIN-215ENST00000575112 LIX1Q8N485 282 aa8.35□□□□□ -1.07
RPAIN-215ENST00000575112 BCL7CQ8WUZ0 217 aaPredicted RBP8.35□□□□□ -1.07
RPAIN-215ENST00000575112 LINC01599Q8WXQ3 324 aa8.35□□□□□ -1.07
RPAIN-215ENST00000575112 KLK6Q92876 244 aa8.35□□□□□ -1.07
RPAIN-215ENST00000575112 OTULINQ96BN8 352 aa8.35□□□□□ -1.07
RPAIN-215ENST00000575112 MYO19Q96H55 970 aa8.35□□□□□ -1.07
RPAIN-215ENST00000575112 UBXN10Q96LJ8 280 aa8.35□□□□□ -1.07
RPAIN-215ENST00000575112 TRIM54Q9BYV2 358 aa8.35□□□□□ -1.07
RPAIN-215ENST00000575112 RNF167Q9H6Y7 350 aa8.35□□□□□ -1.07
RPAIN-215ENST00000575112 HCFC1R1Q9NWW0 138 aa8.35□□□□□ -1.07
RPAIN-215ENST00000575112 TUBA8Q9NY65 449 aaPredicted RBP8.35□□□□□ -1.07
RPAIN-215ENST00000575112 ADGRE2Q9UHX3 823 aa8.35□□□□□ -1.07
RPAIN-215ENST00000575112 EIF3LQ9Y262 564 aaKnown RBP8.35□□□□□ -1.07
RPAIN-215ENST00000575112 TET1Q8NFU7 2136 aa8.35□□□□□ -1.07
RPAIN-215ENST00000575112 RAD51BO15315 384 aa8.35□□□□□ -1.07
RPAIN-215ENST00000575112 ADAMTS4O75173 837 aa8.35□□□□□ -1.07
RPAIN-215ENST00000575112 HSMCR30P0CW71 290 aa8.35□□□□□ -1.07
RPAIN-215ENST00000575112 COL6A1P12109 1028 aa8.35□□□□□ -1.07
RPAIN-215ENST00000575112 PTNP21246 168 aa8.35□□□□□ -1.07
RPAIN-215ENST00000575112 GJA8P48165 433 aa8.35□□□□□ -1.07
RPAIN-215ENST00000575112 TTPAP49638 278 aa8.35□□□□□ -1.07
RPAIN-215ENST00000575112 ABRAXAS2Q15018 415 aa8.35□□□□□ -1.07
RPAIN-215ENST00000575112 FAM214AQ32MH5 1076 aa8.35□□□□□ -1.07
RPAIN-215ENST00000575112 ZCCHC8Q6NZY4 707 aaKnown RBP8.35□□□□□ -1.07
RPAIN-215ENST00000575112 TRMT11Q7Z4G4 463 aaKnown RBP8.35□□□□□ -1.07
RPAIN-215ENST00000575112 UMODL1-AS1Q8N2C9 162 aa8.35□□□□□ -1.07
RPAIN-215ENST00000575112 ZNF420Q8TAQ5 688 aaPredicted RBP8.35□□□□□ -1.07
RPAIN-215ENST00000575112 TOP1MTQ969P6 601 aa8.35□□□□□ -1.07
RPAIN-215ENST00000575112 ZFYVE19Q96K21 471 aa8.35□□□□□ -1.07
RPAIN-215ENST00000575112 MBOAT4Q96T53 435 aa8.35□□□□□ -1.07
RPAIN-215ENST00000575112 OSGEPL1Q9H4B0 414 aa8.35□□□□□ -1.07
RPAIN-215ENST00000575112 EHD1Q9H4M9 534 aa8.35□□□□□ -1.07
RPAIN-215ENST00000575112 TMEM248Q9NWD8 314 aa8.35□□□□□ -1.07
RPAIN-215ENST00000575112 TRBV23OR9-2A0A075B6M9 112 aa8.34□□□□□ -1.07
RPAIN-215ENST00000575112 KPNA5O15131 536 aa8.34□□□□□ -1.07
RPAIN-215ENST00000575112 INPPL1O15357 1258 aa8.34□□□□□ -1.07
RPAIN-215ENST00000575112 CLDN11O75508 207 aa8.34□□□□□ -1.07
RPAIN-215ENST00000575112 CST1P01037 141 aa8.34□□□□□ -1.07
RPAIN-215ENST00000575112 OPN1SWP03999 348 aa8.34□□□□□ -1.07
RPAIN-215ENST00000575112 ALPLP05186 524 aa8.34□□□□□ -1.07
RPAIN-215ENST00000575112 ATXN1LP0C7T5 689 aaKnown RBP8.34□□□□□ -1.07
RPAIN-215ENST00000575112 PREPP48147 710 aa8.34□□□□□ -1.07
RPAIN-215ENST00000575112 IFITM2Q01629 132 aa8.34□□□□□ -1.07
RPAIN-215ENST00000575112 GPR17Q13304 367 aa8.34□□□□□ -1.07
RPAIN-215ENST00000575112 GTF2H2Q13888 395 aa8.34□□□□□ -1.07
RPAIN-215ENST00000575112 ACOX1Q15067 660 aa8.34□□□□□ -1.07
RPAIN-215ENST00000575112 INAQ16352 499 aa8.34□□□□□ -1.07
RPAIN-215ENST00000575112 XKR4Q5GH76 650 aa8.34□□□□□ -1.07
RPAIN-215ENST00000575112 ADGRF1Q5T601 910 aa8.34□□□□□ -1.07
RPAIN-215ENST00000575112 IER5LQ5T953 404 aa8.34□□□□□ -1.07
RPAIN-215ENST00000575112 GTF2H2CQ6P1K8 395 aa8.34□□□□□ -1.07
RPAIN-215ENST00000575112 CD300LGQ6UXG3 332 aa8.34□□□□□ -1.07
RPAIN-215ENST00000575112 NECAB2Q7Z6G3 386 aa8.34□□□□□ -1.07
RPAIN-215ENST00000575112 ATG16L2Q8NAA4 619 aa8.34□□□□□ -1.07
RPAIN-215ENST00000575112 CHDHQ8NE62 594 aaPredicted RBP8.34□□□□□ -1.07
RPAIN-215ENST00000575112 SPPL2AQ8TCT8 520 aa8.34□□□□□ -1.07
RPAIN-215ENST00000575112 STARD8Q92502 1023 aa8.34□□□□□ -1.07
RPAIN-215ENST00000575112 UROC1Q96N76 676 aa8.34□□□□□ -1.07
RPAIN-215ENST00000575112 FAM126AQ9BYI3 521 aaPredicted RBP8.34□□□□□ -1.07
RPAIN-215ENST00000575112 MRPL17Q9NRX2 175 aaKnown RBP8.34□□□□□ -1.07
RPAIN-215ENST00000575112 TMEM161AQ9NX61 479 aa8.34□□□□□ -1.07
RPAIN-215ENST00000575112 GNPTGQ9UJJ9 305 aa8.34□□□□□ -1.07
RPAIN-215ENST00000575112 PTBP2Q9UKA9 531 aaKnown RBP8.34□□□□□ -1.07
RPAIN-215ENST00000575112 NEU3Q9UQ49 428 aa8.34□□□□□ -1.07
RPAIN-215ENST00000575112 ZNF451Q9Y4E5 1061 aa8.34□□□□□ -1.07
RPAIN-215ENST00000575112 YIPF1Q9Y548 306 aa8.34□□□□□ -1.07
RPAIN-215ENST00000575112 A0A1B0GVM2 712 aa8.34□□□□□ -1.07
RPAIN-215ENST00000575112 ZNF840PA6NDX5 716 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms