RNA–Protein interactions for RNA: ENST00000574054.1

CHRNB1-206, Transcript of cholinergic receptor nicotinic beta 1 subunit, humanhuman

TSL 2

Gene CHRNB1, Length 583 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1-206ENST00000574054 MLIPQ5VWP3 458 aa20.39■□□□□ 0.85
CHRNB1-206ENST00000574054 RAB43Q86YS6 212 aa20.39■□□□□ 0.85
CHRNB1-206ENST00000574054 ZBTB2Q8N680 514 aa20.39■□□□□ 0.85
CHRNB1-206ENST00000574054 EFCAB3Q8N7B9 438 aa20.39■□□□□ 0.85
CHRNB1-206ENST00000574054 GLIS1Q8NBF1 620 aa20.39■□□□□ 0.85
CHRNB1-206ENST00000574054 CFAP61Q8NHU2 1237 aa20.39■□□□□ 0.85
CHRNB1-206ENST00000574054 LKAAEAR1Q8TD35 194 aa20.39■□□□□ 0.85
CHRNB1-206ENST00000574054 CIDEBQ9UHD4 219 aa20.39■□□□□ 0.85
CHRNB1-206ENST00000574054 GPN3Q9UHW5 284 aaPredicted RBP20.39■□□□□ 0.85
CHRNB1-206ENST00000574054 ZNF451Q9Y4E5 1061 aa20.39■□□□□ 0.85
CHRNB1-206ENST00000574054 IQCF5A8MTL0 148 aa20.38■□□□□ 0.85
CHRNB1-206ENST00000574054 ZSCAN9O15535 394 aaPredicted RBP20.38■□□□□ 0.85
CHRNB1-206ENST00000574054 ZSCAN5DPP0CG00 497 aa20.38■□□□□ 0.85
CHRNB1-206ENST00000574054 PKLRP30613 574 aa20.38■□□□□ 0.85
CHRNB1-206ENST00000574054 CD97P48960 835 aa20.38■□□□□ 0.85
CHRNB1-206ENST00000574054 RRADP55042 308 aa20.38■□□□□ 0.85
CHRNB1-206ENST00000574054 SESN2P58004 480 aaPredicted RBP20.38■□□□□ 0.85
CHRNB1-206ENST00000574054 ACVR1Q04771 509 aa20.38■□□□□ 0.85
CHRNB1-206ENST00000574054 RPS6KA1Q15418 735 aa20.38■□□□□ 0.85
CHRNB1-206ENST00000574054 SLC5A12Q1EHB4 618 aa20.38■□□□□ 0.85
CHRNB1-206ENST00000574054 AARS2Q5JTZ9 985 aaKnown RBP20.38■□□□□ 0.85
CHRNB1-206ENST00000574054 ZNF385CQ66K41 422 aaPredicted RBP20.38■□□□□ 0.85
CHRNB1-206ENST00000574054 LDB1Q86U70 411 aaPredicted RBP20.38■□□□□ 0.85
CHRNB1-206ENST00000574054 VRK3Q8IV63 474 aa20.38■□□□□ 0.85
CHRNB1-206ENST00000574054 FAM20CQ8IXL6 584 aa20.38■□□□□ 0.85
CHRNB1-206ENST00000574054 SLC22A15Q8IZD6 547 aa20.38■□□□□ 0.85
CHRNB1-206ENST00000574054 ZNF655Q8N720 491 aaPredicted RBP20.38■□□□□ 0.85
CHRNB1-206ENST00000574054 FLVCR1-AS1Q8TAF5 88 aa20.38■□□□□ 0.85
CHRNB1-206ENST00000574054 C17orf62Q9BQA9 187 aa20.38■□□□□ 0.85
CHRNB1-206ENST00000574054 MLXIPLQ9NP71 852 aa20.38■□□□□ 0.85
CHRNB1-206ENST00000574054 CATSPERZQ9NTU4 200 aa20.38■□□□□ 0.85
CHRNB1-206ENST00000574054 TXLNGQ9NUQ3 528 aa20.38■□□□□ 0.85
CHRNB1-206ENST00000574054 ANAPC5Q9UJX4 755 aa20.38■□□□□ 0.85
CHRNB1-206ENST00000574054 APOA4P06727 396 aa20.37■□□□□ 0.85
CHRNB1-206ENST00000574054 CTSBP07858 339 aa20.37■□□□□ 0.85
CHRNB1-206ENST00000574054 PEBP1P30086 187 aaKnown RBP20.37■□□□□ 0.85
CHRNB1-206ENST00000574054 GABRA4P48169 554 aa20.37■□□□□ 0.85
CHRNB1-206ENST00000574054 RAB28P51157 221 aa20.37■□□□□ 0.85
CHRNB1-206ENST00000574054 SLC9A5Q14940 896 aa20.37■□□□□ 0.85
CHRNB1-206ENST00000574054 TMED2Q15363 201 aa20.37■□□□□ 0.85
CHRNB1-206ENST00000574054 RHBDD2Q6NTF9 364 aa20.37■□□□□ 0.85
CHRNB1-206ENST00000574054 MED25Q71SY5 747 aa20.37■□□□□ 0.85
CHRNB1-206ENST00000574054 TAX1BP1Q86VP1 789 aa20.37■□□□□ 0.85
CHRNB1-206ENST00000574054 KRT222Q8N1A0 295 aa20.37■□□□□ 0.85
CHRNB1-206ENST00000574054 C2orf73Q8N5S3 287 aaPredicted RBP20.37■□□□□ 0.85
CHRNB1-206ENST00000574054 TMEM102Q8N9M5 508 aaPredicted RBP20.37■□□□□ 0.85
CHRNB1-206ENST00000574054 FDCSPQ8NFU4 85 aa20.37■□□□□ 0.85
CHRNB1-206ENST00000574054 CPT1CQ8TCG5 803 aa20.37■□□□□ 0.85
CHRNB1-206ENST00000574054 ASZ1Q8WWH4 475 aa20.37■□□□□ 0.85
CHRNB1-206ENST00000574054 DHRS4Q9BTZ2 278 aa20.37■□□□□ 0.85
CHRNB1-206ENST00000574054 AP1M1Q9BXS5 423 aa20.37■□□□□ 0.85
CHRNB1-206ENST00000574054 CHRNA10Q9GZZ6 450 aa20.37■□□□□ 0.85
CHRNB1-206ENST00000574054 CHRAC1Q9NRG0 131 aa20.37■□□□□ 0.85
CHRNB1-206ENST00000574054 MARCH4Q9P2E8 410 aaPredicted RBP20.37■□□□□ 0.85
CHRNB1-206ENST00000574054 IFT80Q9P2H3 777 aaPredicted RBP20.37■□□□□ 0.85
CHRNB1-206ENST00000574054 DHCR7Q9UBM7 475 aaKnown RBP20.37■□□□□ 0.85
CHRNB1-206ENST00000574054 KLHL20Q9Y2M5 609 aa20.37■□□□□ 0.85
CHRNB1-206ENST00000574054 SPTAN1Q13813 2472 aaKnown RBP20.37■□□□□ 0.85
CHRNB1-206ENST00000574054 VPS4BO75351 444 aa20.36■□□□□ 0.85
CHRNB1-206ENST00000574054 CEACAM4O75871 244 aa20.36■□□□□ 0.85
CHRNB1-206ENST00000574054 RPN2P04844 631 aa20.36■□□□□ 0.85
CHRNB1-206ENST00000574054 RPL22P35268 128 aaKnown RBP20.36■□□□□ 0.85
CHRNB1-206ENST00000574054 CRADDP78560 199 aa20.36■□□□□ 0.85
CHRNB1-206ENST00000574054 DCDP81605 110 aaKnown RBP20.36■□□□□ 0.85
CHRNB1-206ENST00000574054 RAPSNQ13702 412 aa20.36■□□□□ 0.85
CHRNB1-206ENST00000574054 KYNUQ16719 465 aa20.36■□□□□ 0.85
CHRNB1-206ENST00000574054 MEI1Q5TIA1 1274 aa20.36■□□□□ 0.85
CHRNB1-206ENST00000574054 PAPD7Q5XG87 772 aaKnown RBP20.36■□□□□ 0.85
CHRNB1-206ENST00000574054 PTRHD1Q6GMV3 140 aaKnown RBP20.36■□□□□ 0.85
CHRNB1-206ENST00000574054 DCUN1D3Q8IWE4 304 aa20.36■□□□□ 0.85
CHRNB1-206ENST00000574054 DNAJC22Q8N4W6 341 aa20.36■□□□□ 0.85
CHRNB1-206ENST00000574054 FAM26EQ8N5C1 309 aa20.36■□□□□ 0.85
CHRNB1-206ENST00000574054 OTUD6BQ8N6M0 293 aa20.36■□□□□ 0.85
CHRNB1-206ENST00000574054 LMNTD1Q8N9Z9 388 aa20.36■□□□□ 0.85
CHRNB1-206ENST00000574054 GSDMBQ8TAX9 411 aa20.36■□□□□ 0.85
CHRNB1-206ENST00000574054 PROKR1Q8TCW9 393 aa20.36■□□□□ 0.85
CHRNB1-206ENST00000574054 SGSM3Q96HU1 749 aa20.36■□□□□ 0.85
CHRNB1-206ENST00000574054 GBP5Q96PP8 586 aa20.36■□□□□ 0.85
CHRNB1-206ENST00000574054 NUDT9Q9BW91 350 aa20.36■□□□□ 0.85
CHRNB1-206ENST00000574054 CARD6Q9BX69 1037 aa20.36■□□□□ 0.85
CHRNB1-206ENST00000574054 MFRPQ9BY79 579 aa20.36■□□□□ 0.85
CHRNB1-206ENST00000574054 GPR83Q9NYM4 423 aa20.36■□□□□ 0.85
CHRNB1-206ENST00000574054 NDOR1Q9UHB4 597 aa20.36■□□□□ 0.85
CHRNB1-206ENST00000574054 VPS4AQ9UN37 437 aa20.36■□□□□ 0.85
CHRNB1-206ENST00000574054 SRPK3Q9UPE1 567 aa20.36■□□□□ 0.85
CHRNB1-206ENST00000574054 PLCL2Q9UPR0 1127 aa20.36■□□□□ 0.85
CHRNB1-206ENST00000574054 CDYLQ9Y232 598 aa20.36■□□□□ 0.85
CHRNB1-206ENST00000574054 PTRH2Q9Y3E5 179 aaKnown RBP20.36■□□□□ 0.85
CHRNB1-206ENST00000574054 PCDHGB7Q9Y5F8 929 aa20.36■□□□□ 0.85
CHRNB1-206ENST00000574054 CLEC18AA5D8T8 446 aa20.35■□□□□ 0.85
CHRNB1-206ENST00000574054 H3BMH7 237 aa20.35■□□□□ 0.85
CHRNB1-206ENST00000574054 PRMT5O14744 637 aaPredicted RBP20.35■□□□□ 0.85
CHRNB1-206ENST00000574054 CD3EAPO15446 510 aaKnown RBP20.35■□□□□ 0.85
CHRNB1-206ENST00000574054 DPM1O60762 260 aa20.35■□□□□ 0.85
CHRNB1-206ENST00000574054 MAGP20916 626 aa20.35■□□□□ 0.85
CHRNB1-206ENST00000574054 FOLR3P41439 243 aa20.35■□□□□ 0.85
CHRNB1-206ENST00000574054 TTPAP49638 278 aa20.35■□□□□ 0.85
CHRNB1-206ENST00000574054 BASP1P80723 227 aaKnown RBP20.35■□□□□ 0.85
CHRNB1-206ENST00000574054 SRSF1Q07955 248 aaKnown RBP eCLIP20.35■□□□□ 0.85
CHRNB1-206ENST00000574054 PCID2Q5JVF3 399 aa20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms