RNA–Protein interactions for RNA: ENST00000571272.5

SCARF1-205, Transcript of scavenger receptor class F member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCARF1, Length 2,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-205ENST00000571272 GALNT10Q86SR1 603 aa17.08■□□□□ 0.32
SCARF1-205ENST00000571272 HIPK1Q86Z02 1210 aa17.08■□□□□ 0.32
SCARF1-205ENST00000571272 ZDHHC21Q8IVQ6 265 aa17.08■□□□□ 0.32
SCARF1-205ENST00000571272 CHPFQ8IZ52 775 aa17.08■□□□□ 0.32
SCARF1-205ENST00000571272 PIK3C3Q8NEB9 887 aa17.08■□□□□ 0.32
SCARF1-205ENST00000571272 HPS1Q92902 700 aa17.08■□□□□ 0.32
SCARF1-205ENST00000571272 ITPKCQ96DU7 683 aa17.08■□□□□ 0.32
SCARF1-205ENST00000571272 PYURFQ96I23 114 aa17.08■□□□□ 0.32
SCARF1-205ENST00000571272 C1orf109Q9NX04 203 aa17.08■□□□□ 0.32
SCARF1-205ENST00000571272 PNMA8BQ9ULN7 279 aaPredicted RBP17.08■□□□□ 0.32
SCARF1-205ENST00000571272 PLXNA3P51805 1871 aa17.08■□□□□ 0.32
SCARF1-205ENST00000571272 SCN10AQ9Y5Y9 1956 aa17.07■□□□□ 0.32
SCARF1-205ENST00000571272 H3BNC9 293 aa17.07■□□□□ 0.32
SCARF1-205ENST00000571272 KDM1AO60341 852 aa17.07■□□□□ 0.32
SCARF1-205ENST00000571272 C1QCP02747 245 aa17.07■□□□□ 0.32
SCARF1-205ENST00000571272 ALPIP09923 528 aa17.07■□□□□ 0.32
SCARF1-205ENST00000571272 BMP1P13497 986 aa17.07■□□□□ 0.32
SCARF1-205ENST00000571272 NRIP1P48552 1158 aa17.07■□□□□ 0.32
SCARF1-205ENST00000571272 DSG4Q86SJ6 1040 aa17.07■□□□□ 0.32
SCARF1-205ENST00000571272 P2RY8Q86VZ1 359 aa17.07■□□□□ 0.32
SCARF1-205ENST00000571272 SLC22A15Q8IZD6 547 aa17.07■□□□□ 0.32
SCARF1-205ENST00000571272 RPL3LQ92901 407 aaKnown RBP17.07■□□□□ 0.32
SCARF1-205ENST00000571272 VMP1Q96GC9 406 aa17.07■□□□□ 0.32
SCARF1-205ENST00000571272 GPR63Q9BZJ6 419 aa17.07■□□□□ 0.32
SCARF1-205ENST00000571272 ABCG8Q9H221 673 aa17.07■□□□□ 0.32
SCARF1-205ENST00000571272 MAGEE1Q9HCI5 957 aa17.07■□□□□ 0.32
SCARF1-205ENST00000571272 PER2O15055 1255 aa17.07■□□□□ 0.32
SCARF1-205ENST00000571272 SLC22A1O15245 554 aa17.07■□□□□ 0.32
SCARF1-205ENST00000571272 AQP9O43315 295 aa17.07■□□□□ 0.32
SCARF1-205ENST00000571272 CNOT3O75175 753 aaKnown RBP17.07■□□□□ 0.32
SCARF1-205ENST00000571272 BCKDHAP12694 445 aa17.07■□□□□ 0.32
SCARF1-205ENST00000571272 DUSP4Q13115 394 aa17.07■□□□□ 0.32
SCARF1-205ENST00000571272 CPSF6Q16630 551 aaKnown RBP eCLIP17.07■□□□□ 0.32
SCARF1-205ENST00000571272 DGUOKQ16854 277 aa17.07■□□□□ 0.32
SCARF1-205ENST00000571272 INAVAQ3KP66 663 aa17.07■□□□□ 0.32
SCARF1-205ENST00000571272 CLLU1OSQ5K130 101 aa17.07■□□□□ 0.32
SCARF1-205ENST00000571272 CPZQ66K79 652 aa17.07■□□□□ 0.32
SCARF1-205ENST00000571272 MFSD4AQ8N468 514 aa17.07■□□□□ 0.32
SCARF1-205ENST00000571272 ULK4Q96C45 1275 aa17.07■□□□□ 0.32
SCARF1-205ENST00000571272 CLPBQ9H078 707 aa17.07■□□□□ 0.32
SCARF1-205ENST00000571272 ABCG2Q9UNQ0 655 aa17.07■□□□□ 0.32
SCARF1-205ENST00000571272 SCAMP3O14828 347 aaKnown RBP17.07■□□□□ 0.32
SCARF1-205ENST00000571272 MT-ND2P03891 347 aa17.07■□□□□ 0.32
SCARF1-205ENST00000571272 PSMA3P25788 255 aa17.07■□□□□ 0.32
SCARF1-205ENST00000571272 EPHA2P29317 976 aa17.07■□□□□ 0.32
SCARF1-205ENST00000571272 MAGEA11P43364 429 aa17.07■□□□□ 0.32
SCARF1-205ENST00000571272 MASP1P48740 699 aa17.07■□□□□ 0.32
SCARF1-205ENST00000571272 CLK3P49761 638 aaKnown RBP17.07■□□□□ 0.32
SCARF1-205ENST00000571272 MAD2L1Q13257 205 aaPredicted RBP17.07■□□□□ 0.32
SCARF1-205ENST00000571272 GLB1L3Q8NCI6 653 aaPredicted RBP17.07■□□□□ 0.32
SCARF1-205ENST00000571272 ZNF540Q8NDQ6 660 aa17.07■□□□□ 0.32
SCARF1-205ENST00000571272 S100ZQ8WXG8 99 aa17.07■□□□□ 0.32
SCARF1-205ENST00000571272 UBE2FQ969M7 185 aa17.07■□□□□ 0.32
SCARF1-205ENST00000571272 SLC35B4Q969S0 331 aa17.07■□□□□ 0.32
SCARF1-205ENST00000571272 PDLIM5Q96HC4 596 aaKnown RBP17.07■□□□□ 0.32
SCARF1-205ENST00000571272 PRSS21Q9Y6M0 314 aa17.07■□□□□ 0.32
SCARF1-205ENST00000571272 SLC28A1O00337 649 aa17.06■□□□□ 0.32
SCARF1-205ENST00000571272 DNAJB5O75953 348 aa17.06■□□□□ 0.32
SCARF1-205ENST00000571272 LRATO95237 230 aa17.06■□□□□ 0.32
SCARF1-205ENST00000571272 SLC25A14O95258 325 aaPredicted RBP17.06■□□□□ 0.32
SCARF1-205ENST00000571272 CDKN2CP42773 168 aa17.06■□□□□ 0.32
SCARF1-205ENST00000571272 DAPP51397 102 aa17.06■□□□□ 0.32
SCARF1-205ENST00000571272 CDH4P55283 916 aa17.06■□□□□ 0.32
SCARF1-205ENST00000571272 CLCA4Q14CN2 919 aa17.06■□□□□ 0.32
SCARF1-205ENST00000571272 RTN4RL1Q86UN2 441 aaPredicted RBP17.06■□□□□ 0.32
SCARF1-205ENST00000571272 SERPINA9Q86WD7 417 aa17.06■□□□□ 0.32
SCARF1-205ENST00000571272 TSSK3Q96PN8 268 aa17.06■□□□□ 0.32
SCARF1-205ENST00000571272 FAM126AQ9BYI3 521 aaPredicted RBP17.06■□□□□ 0.32
SCARF1-205ENST00000571272 SPC25Q9HBM1 224 aa17.06■□□□□ 0.32
SCARF1-205ENST00000571272 RASSF1Q9NS23 344 aa17.06■□□□□ 0.32
SCARF1-205ENST00000571272 IL17CQ9P0M4 197 aa17.06■□□□□ 0.32
SCARF1-205ENST00000571272 DLGAP4Q9Y2H0 992 aa17.06■□□□□ 0.32
SCARF1-205ENST00000571272 CHD5Q8TDI0 1954 aa17.06■□□□□ 0.32
SCARF1-205ENST00000571272 TRBV5-3A0A0A0MS03 114 aa17.06■□□□□ 0.32
SCARF1-205ENST00000571272 hCG_2039718K7EN88 272 aa17.06■□□□□ 0.32
SCARF1-205ENST00000571272 RECQL5O94762 991 aaPredicted RBP17.06■□□□□ 0.32
SCARF1-205ENST00000571272 GJB5O95377 273 aa17.06■□□□□ 0.32
SCARF1-205ENST00000571272 SLC35A2P78381 396 aa17.06■□□□□ 0.32
SCARF1-205ENST00000571272 CACNG1Q06432 222 aa17.06■□□□□ 0.32
SCARF1-205ENST00000571272 DSC1Q08554 894 aa17.06■□□□□ 0.32
SCARF1-205ENST00000571272 GBX1Q14549 363 aa17.06■□□□□ 0.32
SCARF1-205ENST00000571272 ACOX1Q15067 660 aa17.06■□□□□ 0.32
SCARF1-205ENST00000571272 RFX4Q33E94 735 aa17.06■□□□□ 0.32
SCARF1-205ENST00000571272 RSPO2Q6UXX9 243 aaPredicted RBP17.06■□□□□ 0.32
SCARF1-205ENST00000571272 STK40Q8N2I9 435 aa17.06■□□□□ 0.32
SCARF1-205ENST00000571272 CD244Q9BZW8 370 aa17.06■□□□□ 0.32
SCARF1-205ENST00000571272 MAGIXQ9H6Y5 334 aa17.06■□□□□ 0.32
SCARF1-205ENST00000571272 TRMT13Q9NUP7 481 aaKnown RBP17.06■□□□□ 0.32
SCARF1-205ENST00000571272 TPRKBQ9Y3C4 175 aa17.06■□□□□ 0.32
SCARF1-205ENST00000571272 MANBAO00462 879 aa17.05■□□□□ 0.32
SCARF1-205ENST00000571272 GLUD1P00367 558 aa17.05■□□□□ 0.32
SCARF1-205ENST00000571272 TGM1P22735 817 aa17.05■□□□□ 0.32
SCARF1-205ENST00000571272 SLC14A1Q13336 389 aa17.05■□□□□ 0.32
SCARF1-205ENST00000571272 USP39Q53GS9 565 aaKnown RBP17.05■□□□□ 0.32
SCARF1-205ENST00000571272 RNF219Q5W0B1 726 aaPredicted RBP17.05■□□□□ 0.32
SCARF1-205ENST00000571272 ATG9BQ674R7 924 aa17.05■□□□□ 0.32
SCARF1-205ENST00000571272 RNF19BQ6ZMZ0 732 aa17.05■□□□□ 0.32
SCARF1-205ENST00000571272 PAGE2Q7Z2X7 111 aa17.05■□□□□ 0.32
SCARF1-205ENST00000571272 OR52E4Q8NGH9 312 aa17.05■□□□□ 0.32
SCARF1-205ENST00000571272 CPPED1Q9BRF8 314 aaPredicted RBP17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms