RNA–Protein interactions for RNA: ENST00000570287.6

TCF4-246, Transcript of transcription factor 4, humanhuman

TSL 1 (best) BASIC

Gene TCF4, Length 3,163 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-246ENST00000570287 LYSMD2Q8IV50 215 aa7.88□□□□□ -1.15
TCF4-246ENST00000570287 MRPL41Q8IXM3 137 aaKnown RBP7.88□□□□□ -1.15
TCF4-246ENST00000570287 THEM5Q8N1Q8 247 aa7.88□□□□□ -1.15
TCF4-246ENST00000570287 TRIB2Q92519 343 aa7.88□□□□□ -1.15
TCF4-246ENST00000570287 C1orf50Q9BV19 199 aa7.88□□□□□ -1.15
TCF4-246ENST00000570287 CDIP1Q9H305 208 aa7.88□□□□□ -1.15
TCF4-246ENST00000570287 COPG2Q9UBF2 871 aa7.88□□□□□ -1.15
TCF4-246ENST00000570287 DNAJC16Q9Y2G8 782 aa7.88□□□□□ -1.15
TCF4-246ENST00000570287 SNX10Q9Y5X0 201 aa7.88□□□□□ -1.15
TCF4-246ENST00000570287 HDAC3O15379 428 aa7.88□□□□□ -1.15
TCF4-246ENST00000570287 YKT6O15498 198 aa7.88□□□□□ -1.15
TCF4-246ENST00000570287 ZW10O43264 779 aa7.88□□□□□ -1.15
TCF4-246ENST00000570287 JRKO75564 520 aa7.88□□□□□ -1.15
TCF4-246ENST00000570287 PRKCGP05129 697 aa7.88□□□□□ -1.15
TCF4-246ENST00000570287 CTRB1P17538 263 aa7.88□□□□□ -1.15
TCF4-246ENST00000570287 CD52P31358 61 aa7.88□□□□□ -1.15
TCF4-246ENST00000570287 RCVRNP35243 200 aa7.88□□□□□ -1.15
TCF4-246ENST00000570287 THPOP40225 353 aa7.88□□□□□ -1.15
TCF4-246ENST00000570287 BRCC3P46736 316 aa7.88□□□□□ -1.15
TCF4-246ENST00000570287 HARS2P49590 506 aaKnown RBP7.88□□□□□ -1.15
TCF4-246ENST00000570287 PTPN5P54829 565 aa7.88□□□□□ -1.15
TCF4-246ENST00000570287 RUNX1T1Q06455 604 aa7.88□□□□□ -1.15
TCF4-246ENST00000570287 CDH17Q12864 832 aa7.88□□□□□ -1.15
TCF4-246ENST00000570287 BNIP3Q12983 259 aa7.88□□□□□ -1.15
TCF4-246ENST00000570287 KLF10Q13118 480 aa7.88□□□□□ -1.15
TCF4-246ENST00000570287 PEX6Q13608 980 aa7.88□□□□□ -1.15
TCF4-246ENST00000570287 FSCBQ5H9T9 825 aa7.88□□□□□ -1.15
TCF4-246ENST00000570287 CTRB2Q6GPI1 263 aa7.88□□□□□ -1.15
TCF4-246ENST00000570287 LIAT1Q6ZQX7 453 aa7.88□□□□□ -1.15
TCF4-246ENST00000570287 LINC00299Q6ZSB3 139 aa7.88□□□□□ -1.15
TCF4-246ENST00000570287 BHLHE22Q8NFJ8 381 aaPredicted RBP7.88□□□□□ -1.15
TCF4-246ENST00000570287 TOP1MTQ969P6 601 aa7.88□□□□□ -1.15
TCF4-246ENST00000570287 KCTD12Q96CX2 325 aaKnown RBP7.88□□□□□ -1.15
TCF4-246ENST00000570287 VRK1Q99986 396 aaPredicted RBP7.88□□□□□ -1.15
TCF4-246ENST00000570287 COQ10BQ9H8M1 238 aa7.88□□□□□ -1.15
TCF4-246ENST00000570287 SIAEQ9HAT2 523 aa7.88□□□□□ -1.15
TCF4-246ENST00000570287 PPP1R14DQ9NXH3 145 aa7.88□□□□□ -1.15
TCF4-246ENST00000570287 TMEM216Q9P0N5 145 aa7.88□□□□□ -1.15
TCF4-246ENST00000570287 RNF112Q9ULX5 631 aa7.88□□□□□ -1.15
TCF4-246ENST00000570287 TDRD15B5MCY1 1934 aaKnown RBP7.88□□□□□ -1.15
TCF4-246ENST00000570287 PATJQ8NI35 1801 aa7.88□□□□□ -1.15
TCF4-246ENST00000570287 A8MV72 311 aaPredicted RBP7.87□□□□□ -1.15
TCF4-246ENST00000570287 FGF10O15520 208 aaPredicted RBP7.87□□□□□ -1.15
TCF4-246ENST00000570287 POMCP01189 267 aa7.87□□□□□ -1.15
TCF4-246ENST00000570287 JCHAINP01591 159 aa7.87□□□□□ -1.15
TCF4-246ENST00000570287 TGM1P22735 817 aa7.87□□□□□ -1.15
TCF4-246ENST00000570287 TCEA1P23193 301 aaKnown RBP7.87□□□□□ -1.15
TCF4-246ENST00000570287 MYF6P23409 242 aa7.87□□□□□ -1.15
TCF4-246ENST00000570287 CTGFP29279 349 aa7.87□□□□□ -1.15
TCF4-246ENST00000570287 GRK3P35626 688 aa7.87□□□□□ -1.15
TCF4-246ENST00000570287 TMBIM6P55061 237 aa7.87□□□□□ -1.15
TCF4-246ENST00000570287 CDH15P55291 814 aa7.87□□□□□ -1.15
TCF4-246ENST00000570287 SELENBP1Q13228 472 aa7.87□□□□□ -1.15
TCF4-246ENST00000570287 PMS2P3Q13401 168 aa7.87□□□□□ -1.15
TCF4-246ENST00000570287 CEACAM7Q14002 265 aa7.87□□□□□ -1.15
TCF4-246ENST00000570287 SLBPQ14493 270 aaKnown RBP eCLIP7.87□□□□□ -1.15
TCF4-246ENST00000570287 RAB39AQ14964 217 aa7.87□□□□□ -1.15
TCF4-246ENST00000570287 CERCAMQ5T4B2 595 aa7.87□□□□□ -1.15
TCF4-246ENST00000570287 SIGIRRQ6IA17 410 aa7.87□□□□□ -1.15
TCF4-246ENST00000570287 PSAPL1Q6NUJ1 521 aa7.87□□□□□ -1.15
TCF4-246ENST00000570287 RGMBQ6NW40 437 aa7.87□□□□□ -1.15
TCF4-246ENST00000570287 EPGNQ6UW88 154 aa7.87□□□□□ -1.15
TCF4-246ENST00000570287 C10orf107Q8IVU9 208 aa7.87□□□□□ -1.15
TCF4-246ENST00000570287 PGAM4Q8N0Y7 254 aa7.87□□□□□ -1.15
TCF4-246ENST00000570287 MFSD2AQ8NA29 543 aa7.87□□□□□ -1.15
TCF4-246ENST00000570287 LILRB4Q8NHJ6 448 aa7.87□□□□□ -1.15
TCF4-246ENST00000570287 SPPL3Q8TCT6 385 aa7.87□□□□□ -1.15
TCF4-246ENST00000570287 TMEM79Q9BSE2 394 aa7.87□□□□□ -1.15
TCF4-246ENST00000570287 NANOGQ9H9S0 305 aa7.87□□□□□ -1.15
TCF4-246ENST00000570287 ABCC13Q9NSE7 274 aa7.87□□□□□ -1.15
TCF4-246ENST00000570287 TMLHEQ9NVH6 421 aa7.87□□□□□ -1.15
TCF4-246ENST00000570287 AAR2Q9Y312 384 aaKnown RBP7.87□□□□□ -1.15
TCF4-246ENST00000570287 J3QRK9 145 aa7.87□□□□□ -1.15
TCF4-246ENST00000570287 PLOD2O00469 737 aa7.87□□□□□ -1.15
TCF4-246ENST00000570287 KMOO15229 486 aa7.87□□□□□ -1.15
TCF4-246ENST00000570287 SEPT4O43236 478 aa7.87□□□□□ -1.15
TCF4-246ENST00000570287 ACSL4O60488 711 aa7.87□□□□□ -1.15
TCF4-246ENST00000570287 SOCS5O75159 536 aa7.87□□□□□ -1.15
TCF4-246ENST00000570287 CPNE6O95741 557 aa7.87□□□□□ -1.15
TCF4-246ENST00000570287 RALBP11234 206 aa7.87□□□□□ -1.15
TCF4-246ENST00000570287 TYMPP19971 482 aa7.87□□□□□ -1.15
TCF4-246ENST00000570287 PRKAR1BP31321 381 aa7.87□□□□□ -1.15
TCF4-246ENST00000570287 ARRB2P32121 409 aa7.87□□□□□ -1.15
TCF4-246ENST00000570287 PCYT1AP49585 367 aa7.87□□□□□ -1.15
TCF4-246ENST00000570287 TRIM16LQ309B1 348 aa7.87□□□□□ -1.15
TCF4-246ENST00000570287 TTC23LQ6PF05 361 aa7.87□□□□□ -1.15
TCF4-246ENST00000570287 ABRAXAS1Q6UWZ7 409 aa7.87□□□□□ -1.15
TCF4-246ENST00000570287 PIWIL3Q7Z3Z3 882 aaKnown RBP7.87□□□□□ -1.15
TCF4-246ENST00000570287 KCNMB4Q86W47 210 aa7.87□□□□□ -1.15
TCF4-246ENST00000570287 DSELQ8IZU8 1212 aa7.87□□□□□ -1.15
TCF4-246ENST00000570287 OR7G1Q8NGA0 311 aa7.87□□□□□ -1.15
TCF4-246ENST00000570287 OR10T2Q8NGX3 314 aa7.87□□□□□ -1.15
TCF4-246ENST00000570287 PUM2Q8TB72 1066 aaKnown RBP eCLIP7.87□□□□□ -1.151e-6■■■□□ 18.8
TCF4-246ENST00000570287 FBXL8Q96CD0 374 aa7.87□□□□□ -1.15
TCF4-246ENST00000570287 VWCEQ96DN2 955 aa7.87□□□□□ -1.15
TCF4-246ENST00000570287 PPP1R2P1Q96PQ5 205 aa7.87□□□□□ -1.15
TCF4-246ENST00000570287 ZNF347Q96SE7 839 aa7.87□□□□□ -1.15
TCF4-246ENST00000570287 KIFC1Q9BW19 673 aa7.87□□□□□ -1.15
TCF4-246ENST00000570287 ZNF385DQ9H6B1 395 aa7.87□□□□□ -1.15
TCF4-246ENST00000570287 CATSPERBQ9H7T0 1116 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms