RNA–Protein interactions for RNA: ENST00000570189.5

MAP1LC3B-208, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 1,259 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-208ENST00000570189 CCDC88CQ9P219 2028 aa16.5■□□□□ 0.23
MAP1LC3B-208ENST00000570189 SETXQ7Z333 2677 aaKnown RBP16.49■□□□□ 0.23
MAP1LC3B-208ENST00000570189 PVRP15151 417 aa16.49■□□□□ 0.23
MAP1LC3B-208ENST00000570189 NMBRP28336 390 aa16.49■□□□□ 0.23
MAP1LC3B-208ENST00000570189 PEBP1P30086 187 aaKnown RBP16.49■□□□□ 0.23
MAP1LC3B-208ENST00000570189 KCNJ1P48048 391 aa16.49■□□□□ 0.23
MAP1LC3B-208ENST00000570189 HSPA14Q0VDF9 509 aa16.49■□□□□ 0.23
MAP1LC3B-208ENST00000570189 IL10RAQ13651 578 aa16.49■□□□□ 0.23
MAP1LC3B-208ENST00000570189 TMED2Q15363 201 aa16.49■□□□□ 0.23
MAP1LC3B-208ENST00000570189 ZIC1Q15915 447 aa16.49■□□□□ 0.23
MAP1LC3B-208ENST00000570189 CYP1B1Q16678 543 aa16.49■□□□□ 0.23
MAP1LC3B-208ENST00000570189 RNF187Q5TA31 235 aaPredicted RBP16.49■□□□□ 0.23
MAP1LC3B-208ENST00000570189 NUP210LQ5VU65 1888 aa16.49■□□□□ 0.23
MAP1LC3B-208ENST00000570189 RHBDD2Q6NTF9 364 aa16.49■□□□□ 0.23
MAP1LC3B-208ENST00000570189 NAPRTQ6XQN6 538 aa16.49■□□□□ 0.23
MAP1LC3B-208ENST00000570189 HOOK3Q86VS8 718 aa16.49■□□□□ 0.23
MAP1LC3B-208ENST00000570189 VRK3Q8IV63 474 aa16.49■□□□□ 0.23
MAP1LC3B-208ENST00000570189 GPR135Q8IZ08 494 aa16.49■□□□□ 0.23
MAP1LC3B-208ENST00000570189 SLC22A18Q96BI1 424 aa16.49■□□□□ 0.23
MAP1LC3B-208ENST00000570189 CLIP3Q96DZ5 547 aa16.49■□□□□ 0.23
MAP1LC3B-208ENST00000570189 C17orf62Q9BQA9 187 aa16.49■□□□□ 0.23
MAP1LC3B-208ENST00000570189 RAB11FIP5Q9BXF6 653 aa16.49■□□□□ 0.23
MAP1LC3B-208ENST00000570189 FAM60AQ9NP50 221 aa16.49■□□□□ 0.23
MAP1LC3B-208ENST00000570189 MLXIPLQ9NP71 852 aa16.49■□□□□ 0.23
MAP1LC3B-208ENST00000570189 TCFL5Q9UL49 500 aa16.49■□□□□ 0.23
MAP1LC3B-208ENST00000570189 PCDHGA9Q9Y5G4 932 aaKnown RBP16.49■□□□□ 0.23
MAP1LC3B-208ENST00000570189 SPENQ96T58 3664 aaKnown RBP16.49■□□□□ 0.23
MAP1LC3B-208ENST00000570189 ZNF749O43361 778 aa16.48■□□□□ 0.23
MAP1LC3B-208ENST00000570189 MLNP12872 115 aa16.48■□□□□ 0.23
MAP1LC3B-208ENST00000570189 ATP5DP30049 168 aa16.48■□□□□ 0.23
MAP1LC3B-208ENST00000570189 GCGRP47871 477 aa16.48■□□□□ 0.23
MAP1LC3B-208ENST00000570189 CRADDP78560 199 aa16.48■□□□□ 0.23
MAP1LC3B-208ENST00000570189 SARNPP82979 210 aaKnown RBP16.48■□□□□ 0.23
MAP1LC3B-208ENST00000570189 TLE1Q04724 770 aa16.48■□□□□ 0.23
MAP1LC3B-208ENST00000570189 GBX1Q14549 363 aa16.48■□□□□ 0.23
MAP1LC3B-208ENST00000570189 PRAMEF17Q5VTA0 474 aa16.48■□□□□ 0.23
MAP1LC3B-208ENST00000570189 PAPD7Q5XG87 772 aaKnown RBP16.48■□□□□ 0.23
MAP1LC3B-208ENST00000570189 KIAA0930Q6ICG6 404 aaPredicted RBP16.48■□□□□ 0.23
MAP1LC3B-208ENST00000570189 LCN10Q6JVE6 187 aa16.48■□□□□ 0.23
MAP1LC3B-208ENST00000570189 MRNIPQ6NTE8 343 aa16.48■□□□□ 0.23
MAP1LC3B-208ENST00000570189 TLDC1Q6P9B6 456 aa16.48■□□□□ 0.23
MAP1LC3B-208ENST00000570189 TMEM135Q86UB9 458 aa16.48■□□□□ 0.23
MAP1LC3B-208ENST00000570189 DNAJC22Q8N4W6 341 aa16.48■□□□□ 0.23
MAP1LC3B-208ENST00000570189 ENDOVQ8N8Q3 282 aaKnown RBP16.48■□□□□ 0.23
MAP1LC3B-208ENST00000570189 LINC01555Q8NAE3 123 aa16.48■□□□□ 0.23
MAP1LC3B-208ENST00000570189 OR2L8Q8NGY9 312 aa16.48■□□□□ 0.23
MAP1LC3B-208ENST00000570189 HMGCLL1Q8TB92 370 aa16.48■□□□□ 0.23
MAP1LC3B-208ENST00000570189 PROKR1Q8TCW9 393 aa16.48■□□□□ 0.23
MAP1LC3B-208ENST00000570189 MFSD3Q96ES6 412 aa16.48■□□□□ 0.23
MAP1LC3B-208ENST00000570189 PBKQ96KB5 322 aa16.48■□□□□ 0.23
MAP1LC3B-208ENST00000570189 BIRC8Q96P09 236 aa16.48■□□□□ 0.23
MAP1LC3B-208ENST00000570189 SYBUQ9NX95 663 aa16.48■□□□□ 0.23
MAP1LC3B-208ENST00000570189 SRPK3Q9UPE1 567 aa16.48■□□□□ 0.23
MAP1LC3B-208ENST00000570189 TP53TG5Q9Y2B4 290 aa16.48■□□□□ 0.23
MAP1LC3B-208ENST00000570189 TDRKHQ9Y2W6 561 aaKnown RBP16.48■□□□□ 0.23
MAP1LC3B-208ENST00000570189 KLK4Q9Y5K2 254 aa16.48■□□□□ 0.23
MAP1LC3B-208ENST00000570189 IQCF5A8MTL0 148 aa16.47■□□□□ 0.23
MAP1LC3B-208ENST00000570189 H3BMM5 538 aa16.47■□□□□ 0.23
MAP1LC3B-208ENST00000570189 RASGRF2O14827 1237 aa16.47■□□□□ 0.23
MAP1LC3B-208ENST00000570189 CEACAM4O75871 244 aa16.47■□□□□ 0.23
MAP1LC3B-208ENST00000570189 S1PR4O95977 384 aa16.47■□□□□ 0.23
MAP1LC3B-208ENST00000570189 CD63P08962 238 aa16.47■□□□□ 0.23
MAP1LC3B-208ENST00000570189 OGNP20774 298 aaKnown RBP16.47■□□□□ 0.23
MAP1LC3B-208ENST00000570189 CD9P21926 228 aa16.47■□□□□ 0.23
MAP1LC3B-208ENST00000570189 MGAT1P26572 445 aa16.47■□□□□ 0.23
MAP1LC3B-208ENST00000570189 CXCR5P32302 372 aa16.47■□□□□ 0.23
MAP1LC3B-208ENST00000570189 RPS18P62269 152 aaKnown RBP16.47■□□□□ 0.23
MAP1LC3B-208ENST00000570189 KLRB1Q12918 225 aa16.47■□□□□ 0.23
MAP1LC3B-208ENST00000570189 NCF4Q15080 339 aa16.47■□□□□ 0.23
MAP1LC3B-208ENST00000570189 PTRHD1Q6GMV3 140 aaKnown RBP16.47■□□□□ 0.23
MAP1LC3B-208ENST00000570189 LDB1Q86U70 411 aaPredicted RBP16.47■□□□□ 0.23
MAP1LC3B-208ENST00000570189 PTRH1Q86Y79 214 aaKnown RBP16.47■□□□□ 0.23
MAP1LC3B-208ENST00000570189 MCUQ8NE86 351 aa16.47■□□□□ 0.23
MAP1LC3B-208ENST00000570189 LPGAT1Q92604 370 aa16.47■□□□□ 0.23
MAP1LC3B-208ENST00000570189 NAP1L3Q99457 506 aaPredicted RBP16.47■□□□□ 0.23
MAP1LC3B-208ENST00000570189 EPN3Q9H201 632 aa16.47■□□□□ 0.23
MAP1LC3B-208ENST00000570189 ZNF71Q9NQZ8 489 aaPredicted RBP16.47■□□□□ 0.23
MAP1LC3B-208ENST00000570189 TLK1Q9UKI8 766 aa16.47■□□□□ 0.23
MAP1LC3B-208ENST00000570189 SNX7Q9UNH6 387 aa16.47■□□□□ 0.23
MAP1LC3B-208ENST00000570189 NEU2Q9Y3R4 380 aa16.47■□□□□ 0.23
MAP1LC3B-208ENST00000570189 PCDHGB7Q9Y5F8 929 aa16.47■□□□□ 0.23
MAP1LC3B-208ENST00000570189 TCRBV7S3A2A0A539 114 aa16.46■□□□□ 0.23
MAP1LC3B-208ENST00000570189 PFDN6O15212 129 aa16.46■□□□□ 0.23
MAP1LC3B-208ENST00000570189 PRICKLE3O43900 615 aaPredicted RBP16.46■□□□□ 0.23
MAP1LC3B-208ENST00000570189 NDUFS3O75489 264 aa16.46■□□□□ 0.23
MAP1LC3B-208ENST00000570189 OR2B3O76000 313 aa16.46■□□□□ 0.23
MAP1LC3B-208ENST00000570189 ESR1P03372 595 aa16.46■□□□□ 0.23
MAP1LC3B-208ENST00000570189 AGXTP21549 392 aa16.46■□□□□ 0.23
MAP1LC3B-208ENST00000570189 CCNFP41002 786 aa16.46■□□□□ 0.23
MAP1LC3B-208ENST00000570189 CTSL3PQ5NE16 218 aa16.46■□□□□ 0.23
MAP1LC3B-208ENST00000570189 SDCCAG8Q86SQ7 713 aaPredicted RBP16.46■□□□□ 0.23
MAP1LC3B-208ENST00000570189 TRIM73Q86UV7 250 aa16.46■□□□□ 0.23
MAP1LC3B-208ENST00000570189 CAND1Q86VP6 1230 aaKnown RBP16.46■□□□□ 0.23
MAP1LC3B-208ENST00000570189 KRT222Q8N1A0 295 aa16.46■□□□□ 0.23
MAP1LC3B-208ENST00000570189 RAD51AP1Q96B01 352 aa16.46■□□□□ 0.23
MAP1LC3B-208ENST00000570189 IP6K3Q96PC2 410 aa16.46■□□□□ 0.23
MAP1LC3B-208ENST00000570189 GBP5Q96PP8 586 aa16.46■□□□□ 0.23
MAP1LC3B-208ENST00000570189 XAB2Q9HCS7 855 aaKnown RBP16.46■□□□□ 0.23
MAP1LC3B-208ENST00000570189 PLCL2Q9UPR0 1127 aa16.46■□□□□ 0.23
MAP1LC3B-208ENST00000570189 VPS9D1Q9Y2B5 631 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms