RNA–Protein interactions for RNA: ENST00000569764.1

SMG1-217, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 4,187 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-217ENST00000569764 ARHGAP17Q68EM7 881 aa6.53□□□□□ -1.36
SMG1-217ENST00000569764 AADACL2Q6P093 401 aa6.53□□□□□ -1.36
SMG1-217ENST00000569764 SLC47A2Q86VL8 602 aa6.53□□□□□ -1.36
SMG1-217ENST00000569764 AGGF1Q8N302 714 aaeCLIP6.53□□□□□ -1.36
SMG1-217ENST00000569764 SH2D3CQ8N5H7 860 aa6.53□□□□□ -1.36
SMG1-217ENST00000569764 ZMIZ2Q8NF64 920 aa6.53□□□□□ -1.36
SMG1-217ENST00000569764 OR7G1Q8NGA0 311 aa6.53□□□□□ -1.36
SMG1-217ENST00000569764 BBS10Q8TAM1 723 aa6.53□□□□□ -1.36
SMG1-217ENST00000569764 C11orf24Q96F05 449 aaPredicted RBP6.53□□□□□ -1.36
SMG1-217ENST00000569764 REXO5Q96IC2 774 aaKnown RBP6.53□□□□□ -1.36
SMG1-217ENST00000569764 MYADMQ96S97 322 aa6.53□□□□□ -1.36
SMG1-217ENST00000569764 TRIM39Q9HCM9 518 aa6.53□□□□□ -1.36
SMG1-217ENST00000569764 TCF7L1Q9HCS4 588 aa6.53□□□□□ -1.36
SMG1-217ENST00000569764 UBE2TQ9NPD8 197 aaPredicted RBP6.53□□□□□ -1.36
SMG1-217ENST00000569764 INIPQ9NRY2 104 aa6.53□□□□□ -1.36
SMG1-217ENST00000569764 SNX12Q9UMY4 172 aa6.53□□□□□ -1.36
SMG1-217ENST00000569764 FADS3Q9Y5Q0 445 aa6.53□□□□□ -1.36
SMG1-217ENST00000569764 NCOR1O75376 2440 aa6.53□□□□□ -1.36
SMG1-217ENST00000569764 CD3EAPO15446 510 aaKnown RBP6.52□□□□□ -1.37
SMG1-217ENST00000569764 NDUFS3O75489 264 aa6.52□□□□□ -1.37
SMG1-217ENST00000569764 VNN1O95497 513 aa6.52□□□□□ -1.37
SMG1-217ENST00000569764 MT-ATP6P00846 226 aa6.52□□□□□ -1.37
SMG1-217ENST00000569764 ETS1P14921 441 aa6.52□□□□□ -1.37
SMG1-217ENST00000569764 TAS2R40P59535 323 aa6.52□□□□□ -1.37
SMG1-217ENST00000569764 UBE2IP63279 158 aaKnown RBP6.52□□□□□ -1.37
SMG1-217ENST00000569764 SIM1P81133 766 aaPredicted RBP6.52□□□□□ -1.37
SMG1-217ENST00000569764 GLO1Q04760 184 aa6.52□□□□□ -1.37
SMG1-217ENST00000569764 BCL2A1Q16548 175 aa6.52□□□□□ -1.37
SMG1-217ENST00000569764 PARP6Q2NL67 630 aa6.52□□□□□ -1.37
SMG1-217ENST00000569764 ZNF829Q3KNS6 432 aaPredicted RBP6.52□□□□□ -1.37
SMG1-217ENST00000569764 PLA1AQ53H76 456 aa6.52□□□□□ -1.37
SMG1-217ENST00000569764 EEF1DP3Q658K8 133 aa6.52□□□□□ -1.37
SMG1-217ENST00000569764 KCTD11Q693B1 232 aa6.52□□□□□ -1.37
SMG1-217ENST00000569764 CHST9Q7L1S5 443 aa6.52□□□□□ -1.37
SMG1-217ENST00000569764 RD3Q7Z3Z2 195 aa6.52□□□□□ -1.37
SMG1-217ENST00000569764 SPRED1Q7Z699 444 aa6.52□□□□□ -1.37
SMG1-217ENST00000569764 SELENOHQ8IZQ5 122 aaKnown RBP6.52□□□□□ -1.37
SMG1-217ENST00000569764 VWA5B2Q8N398 1253 aa6.52□□□□□ -1.37
SMG1-217ENST00000569764 ATL1Q8WXF7 558 aa6.52□□□□□ -1.37
SMG1-217ENST00000569764 JADE3Q92613 823 aa6.52□□□□□ -1.37
SMG1-217ENST00000569764 TMEM176AQ96HP8 235 aa6.52□□□□□ -1.37
SMG1-217ENST00000569764 HEPHQ9BQS7 1158 aa6.52□□□□□ -1.37
SMG1-217ENST00000569764 ECT2Q9H8V3 914 aa6.52□□□□□ -1.37
SMG1-217ENST00000569764 APEX2Q9UBZ4 518 aa6.52□□□□□ -1.37
SMG1-217ENST00000569764 SAR1BQ9Y6B6 198 aa6.52□□□□□ -1.37
SMG1-217ENST00000569764 TCRBV21S2A2A0A5A6 115 aa6.52□□□□□ -1.37
SMG1-217ENST00000569764 TRPC5OSA6NMA1 111 aa6.52□□□□□ -1.37
SMG1-217ENST00000569764 F8VP50 259 aa6.52□□□□□ -1.37
SMG1-217ENST00000569764 H7C0C1 242 aa6.52□□□□□ -1.37
SMG1-217ENST00000569764 DVL2O14641 736 aa6.52□□□□□ -1.37
SMG1-217ENST00000569764 BIRC5O15392 142 aa6.52□□□□□ -1.37
SMG1-217ENST00000569764 PRPF4O43172 522 aaKnown RBP eCLIP6.52□□□□□ -1.37
SMG1-217ENST00000569764 B4GALT5O43286 388 aa6.52□□□□□ -1.37
SMG1-217ENST00000569764 PRPS2P11908 318 aa6.52□□□□□ -1.37
SMG1-217ENST00000569764 NAGAP17050 411 aa6.52□□□□□ -1.37
SMG1-217ENST00000569764 SERPINA4P29622 427 aa6.52□□□□□ -1.37
SMG1-217ENST00000569764 PCK1P35558 622 aa6.52□□□□□ -1.37
SMG1-217ENST00000569764 FNTBP49356 437 aa6.52□□□□□ -1.37
SMG1-217ENST00000569764 MECP2P51608 486 aaKnown RBP6.52□□□□□ -1.37
SMG1-217ENST00000569764 CCR5P51681 352 aa6.52□□□□□ -1.37
SMG1-217ENST00000569764 GDF10P55107 478 aa6.52□□□□□ -1.37
SMG1-217ENST00000569764 NOMO3P69849 1222 aa6.52□□□□□ -1.37
SMG1-217ENST00000569764 HIKESHIQ53FT3 197 aa6.52□□□□□ -1.37
SMG1-217ENST00000569764 BRMS1LQ5PSV4 323 aa6.52□□□□□ -1.37
SMG1-217ENST00000569764 DCAF12L1Q5VU92 463 aa6.52□□□□□ -1.37
SMG1-217ENST00000569764 SV2AQ7L0J3 742 aa6.52□□□□□ -1.37
SMG1-217ENST00000569764 TRMT10CQ7L0Y3 403 aaKnown RBP6.52□□□□□ -1.37
SMG1-217ENST00000569764 NPAS3Q8IXF0 933 aa6.52□□□□□ -1.37
SMG1-217ENST00000569764 DSELQ8IZU8 1212 aa6.52□□□□□ -1.37
SMG1-217ENST00000569764 CRYBG2Q8N1P7 616 aa6.52□□□□□ -1.37
SMG1-217ENST00000569764 ARL14EPQ8N8R7 260 aaPredicted RBP6.52□□□□□ -1.37
SMG1-217ENST00000569764 DDHD1Q8NEL9 900 aa6.52□□□□□ -1.37
SMG1-217ENST00000569764 ZNF473Q8WTR7 871 aaKnown RBP6.52□□□□□ -1.37
SMG1-217ENST00000569764 MOCOSQ96EN8 888 aa6.52□□□□□ -1.37
SMG1-217ENST00000569764 IFT43Q96FT9 208 aa6.52□□□□□ -1.37
SMG1-217ENST00000569764 LRIG1Q96JA1 1093 aa6.52□□□□□ -1.37
SMG1-217ENST00000569764 VPS35Q96QK1 796 aa6.52□□□□□ -1.37
SMG1-217ENST00000569764 OLFM1Q99784 485 aa6.52□□□□□ -1.37
SMG1-217ENST00000569764 ZSCAN5AQ9BUG6 496 aa6.52□□□□□ -1.37
SMG1-217ENST00000569764 WDCPQ9H6R7 721 aa6.52□□□□□ -1.37
SMG1-217ENST00000569764 ENPP5Q9UJA9 477 aa6.52□□□□□ -1.37
SMG1-217ENST00000569764 ZFHX4Q86UP3 3567 aa6.52□□□□□ -1.37
SMG1-217ENST00000569764 C5orf42Q9H799 3197 aa6.52□□□□□ -1.37
SMG1-217ENST00000569764 XPO1O14980 1071 aaKnown RBP6.52□□□□□ -1.37
SMG1-217ENST00000569764 B4GAT1O43505 415 aa6.52□□□□□ -1.37
SMG1-217ENST00000569764 TGFAP01135 160 aa6.52□□□□□ -1.37
SMG1-217ENST00000569764 LINGO3P0C6S8 592 aa6.52□□□□□ -1.37
SMG1-217ENST00000569764 ZNF888P0CJ79 500 aaPredicted RBP6.52□□□□□ -1.37
SMG1-217ENST00000569764 KITP10721 976 aa6.52□□□□□ -1.37
SMG1-217ENST00000569764 PIM1P11309 404 aaPredicted RBP6.52□□□□□ -1.37
SMG1-217ENST00000569764 CSRP1P21291 193 aaKnown RBP6.52□□□□□ -1.37
SMG1-217ENST00000569764 GALCP54803 685 aa6.52□□□□□ -1.37
SMG1-217ENST00000569764 ZNF33BQ06732 778 aa6.52□□□□□ -1.37
SMG1-217ENST00000569764 CYP24A1Q07973 514 aa6.52□□□□□ -1.37
SMG1-217ENST00000569764 DSC1Q08554 894 aa6.52□□□□□ -1.37
SMG1-217ENST00000569764 ILF2Q12905 390 aaKnown RBP6.52□□□□□ -1.37
SMG1-217ENST00000569764 NFYCQ13952 458 aa6.52□□□□□ -1.37
SMG1-217ENST00000569764 ST3GAL2Q16842 350 aa6.52□□□□□ -1.37
SMG1-217ENST00000569764 USP53Q70EK8 1073 aa6.52□□□□□ -1.37
SMG1-217ENST00000569764 DDIASQ8IXT1 998 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms