RNA–Protein interactions for RNA: ENST00000569063.5

CLK3-225, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 833 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-225ENST00000569063 SIGLEC10Q96LC7 697 aa19.61■□□□□ 0.73
CLK3-225ENST00000569063 GPR87Q9BY21 358 aa19.61■□□□□ 0.73
CLK3-225ENST00000569063 ADNPQ9H2P0 1102 aa19.61■□□□□ 0.73
CLK3-225ENST00000569063 AKIRIN1Q9H9L7 192 aaPredicted RBP19.61■□□□□ 0.73
CLK3-225ENST00000569063 INTS10Q9NVR2 710 aaKnown RBP19.61■□□□□ 0.73
CLK3-225ENST00000569063 GEMIN8Q9NWZ8 242 aaKnown RBP19.61■□□□□ 0.73
CLK3-225ENST00000569063 SERTAD3Q9UJW9 196 aa19.61■□□□□ 0.73
CLK3-225ENST00000569063 VPS9D1Q9Y2B5 631 aa19.61■□□□□ 0.73
CLK3-225ENST00000569063 CRYL1Q9Y2S2 319 aa19.61■□□□□ 0.73
CLK3-225ENST00000569063 A0A0J9YY10 115 aa19.6■□□□□ 0.73
CLK3-225ENST00000569063 B8ZZF3 427 aa19.6■□□□□ 0.73
CLK3-225ENST00000569063 CD9P21926 228 aa19.6■□□□□ 0.73
CLK3-225ENST00000569063 PEBP1P30086 187 aaKnown RBP19.6■□□□□ 0.73
CLK3-225ENST00000569063 CCR10P46092 362 aa19.6■□□□□ 0.73
CLK3-225ENST00000569063 GPS2Q13227 327 aa19.6■□□□□ 0.73
CLK3-225ENST00000569063 GBX1Q14549 363 aa19.6■□□□□ 0.73
CLK3-225ENST00000569063 SLC5A12Q1EHB4 618 aa19.6■□□□□ 0.73
CLK3-225ENST00000569063 TRIM73Q86UV7 250 aa19.6■□□□□ 0.73
CLK3-225ENST00000569063 DDX47Q9H0S4 455 aaKnown RBP19.6■□□□□ 0.73
CLK3-225ENST00000569063 FAM60AQ9NP50 221 aa19.6■□□□□ 0.73
CLK3-225ENST00000569063 STARD5Q9NSY2 213 aa19.6■□□□□ 0.73
CLK3-225ENST00000569063 IL1RAPL1Q9NZN1 696 aa19.6■□□□□ 0.73
CLK3-225ENST00000569063 MRFAP1Q9Y605 127 aa19.6■□□□□ 0.73
CLK3-225ENST00000569063 ISM1B1AKI9 464 aa19.59■□□□□ 0.73
CLK3-225ENST00000569063 KATNA1O75449 491 aa19.59■□□□□ 0.73
CLK3-225ENST00000569063 CREG1O75629 220 aa19.59■□□□□ 0.73
CLK3-225ENST00000569063 USP1O94782 785 aa19.59■□□□□ 0.73
CLK3-225ENST00000569063 S1PR4O95977 384 aa19.59■□□□□ 0.73
CLK3-225ENST00000569063 KLK3P07288 261 aaPredicted RBP19.59■□□□□ 0.73
CLK3-225ENST00000569063 ATP5DP30049 168 aa19.59■□□□□ 0.73
CLK3-225ENST00000569063 POLE2P56282 527 aa19.59■□□□□ 0.73
CLK3-225ENST00000569063 GNG11P61952 73 aa19.59■□□□□ 0.73
CLK3-225ENST00000569063 PTK6Q13882 451 aa19.59■□□□□ 0.73
CLK3-225ENST00000569063 ZIC1Q15915 447 aa19.59■□□□□ 0.73
CLK3-225ENST00000569063 PRAMEF17Q5VTA0 474 aa19.59■□□□□ 0.73
CLK3-225ENST00000569063 ZNF470Q6ECI4 717 aa19.59■□□□□ 0.73
CLK3-225ENST00000569063 C16orf46Q6P387 395 aa19.59■□□□□ 0.73
CLK3-225ENST00000569063 FAM199XQ6PEV8 388 aaPredicted RBP19.59■□□□□ 0.73
CLK3-225ENST00000569063 TTC23LQ6PF05 361 aa19.59■□□□□ 0.73
CLK3-225ENST00000569063 PCGF5Q86SE9 256 aa19.59■□□□□ 0.73
CLK3-225ENST00000569063 ZNF605Q86T29 641 aa19.59■□□□□ 0.73
CLK3-225ENST00000569063 CREG2Q8IUH2 290 aa19.59■□□□□ 0.73
CLK3-225ENST00000569063 LINC01555Q8NAE3 123 aa19.59■□□□□ 0.73
CLK3-225ENST00000569063 OR2L8Q8NGY9 312 aa19.59■□□□□ 0.73
CLK3-225ENST00000569063 RAD51AP1Q96B01 352 aa19.59■□□□□ 0.73
CLK3-225ENST00000569063 SLC22A18Q96BI1 424 aa19.59■□□□□ 0.73
CLK3-225ENST00000569063 FAM117AQ9C073 453 aa19.59■□□□□ 0.73
CLK3-225ENST00000569063 TUBD1Q9UJT1 453 aa19.59■□□□□ 0.73
CLK3-225ENST00000569063 ATRXP46100 2492 aa19.58■□□□□ 0.73
CLK3-225ENST00000569063 E7EQ34 232 aa19.58■□□□□ 0.72
CLK3-225ENST00000569063 MEN1O00255 615 aa19.58■□□□□ 0.72
CLK3-225ENST00000569063 RASGRF2O14827 1237 aa19.58■□□□□ 0.72
CLK3-225ENST00000569063 NIPSNAP2O75323 286 aa19.58■□□□□ 0.72
CLK3-225ENST00000569063 MATN4O95460 622 aa19.58■□□□□ 0.72
CLK3-225ENST00000569063 C1orf105O95561 183 aa19.58■□□□□ 0.72
CLK3-225ENST00000569063 PKMP14618 531 aaKnown RBP19.58■□□□□ 0.72
CLK3-225ENST00000569063 CHRM3P20309 590 aa19.58■□□□□ 0.72
CLK3-225ENST00000569063 CYP2A7P20853 494 aa19.58■□□□□ 0.72
CLK3-225ENST00000569063 RORAP35398 523 aa19.58■□□□□ 0.72
CLK3-225ENST00000569063 PTGIRP43119 386 aa19.58■□□□□ 0.72
CLK3-225ENST00000569063 GABRA4P48169 554 aa19.58■□□□□ 0.72
CLK3-225ENST00000569063 ITGA1P56199 1179 aa19.58■□□□□ 0.72
CLK3-225ENST00000569063 THOC5Q13769 683 aaKnown RBP19.58■□□□□ 0.72
CLK3-225ENST00000569063 ERV3-1Q14264 604 aa19.58■□□□□ 0.72
CLK3-225ENST00000569063 LONRF1Q17RB8 773 aa19.58■□□□□ 0.72
CLK3-225ENST00000569063 ATP1A1-AS1Q5TC04 95 aa19.58■□□□□ 0.72
CLK3-225ENST00000569063 IZUMO3Q5VZ72 239 aa19.58■□□□□ 0.72
CLK3-225ENST00000569063 LMNTD2Q8IXW0 634 aa19.58■□□□□ 0.72
CLK3-225ENST00000569063 DSELQ8IZU8 1212 aa19.58■□□□□ 0.72
CLK3-225ENST00000569063 APOBEC4Q8WW27 367 aaKnown RBP19.58■□□□□ 0.72
CLK3-225ENST00000569063 RAB11FIP5Q9BXF6 653 aa19.58■□□□□ 0.72
CLK3-225ENST00000569063 ACTL8Q9H568 366 aa19.58■□□□□ 0.72
CLK3-225ENST00000569063 ASIC3Q9UHC3 531 aa19.58■□□□□ 0.72
CLK3-225ENST00000569063 PYCARDQ9ULZ3 195 aa19.58■□□□□ 0.72
CLK3-225ENST00000569063 NFS1Q9Y697 457 aa19.58■□□□□ 0.72
CLK3-225ENST00000569063 MAD1L1Q9Y6D9 718 aa19.58■□□□□ 0.72
CLK3-225ENST00000569063 H3BMH7 237 aa19.57■□□□□ 0.72
CLK3-225ENST00000569063 DNALI1O14645 258 aaPredicted RBP19.57■□□□□ 0.72
CLK3-225ENST00000569063 FURINP09958 794 aa19.57■□□□□ 0.72
CLK3-225ENST00000569063 PTPN4P29074 926 aa19.57■□□□□ 0.72
CLK3-225ENST00000569063 CCNFP41002 786 aa19.57■□□□□ 0.72
CLK3-225ENST00000569063 RPS15P62841 145 aaKnown RBP19.57■□□□□ 0.72
CLK3-225ENST00000569063 KCNAB2Q13303 367 aa19.57■□□□□ 0.72
CLK3-225ENST00000569063 DEFB109BQ30KR1 87 aa19.57■□□□□ 0.72
CLK3-225ENST00000569063 MAGEC3Q8TD91 643 aa19.57■□□□□ 0.72
CLK3-225ENST00000569063 SKA2Q8WVK7 121 aaPredicted RBP19.57■□□□□ 0.72
CLK3-225ENST00000569063 SEC14L1Q92503 715 aa19.57■□□□□ 0.72
CLK3-225ENST00000569063 MR1Q95460 341 aa19.57■□□□□ 0.72
CLK3-225ENST00000569063 CLIP3Q96DZ5 547 aa19.57■□□□□ 0.72
CLK3-225ENST00000569063 FOPNLQ96NB1 174 aa19.57■□□□□ 0.72
CLK3-225ENST00000569063 RUFY1Q96T51 708 aa19.57■□□□□ 0.72
CLK3-225ENST00000569063 ACTR5Q9H9F9 607 aaPredicted RBP19.57■□□□□ 0.72
CLK3-225ENST00000569063 PCMTD2Q9NV79 361 aa19.57■□□□□ 0.72
CLK3-225ENST00000569063 GALPQ9UBC7 116 aa19.57■□□□□ 0.72
CLK3-225ENST00000569063 SLC39A10Q9ULF5 831 aa19.57■□□□□ 0.72
CLK3-225ENST00000569063 SAR1BQ9Y6B6 198 aa19.57■□□□□ 0.72
CLK3-225ENST00000569063 FAM169AQ9Y6X4 670 aa19.57■□□□□ 0.72
CLK3-225ENST00000569063 CTAGE9A4FU28 777 aa19.56■□□□□ 0.72
CLK3-225ENST00000569063 HCRTR1O43613 425 aa19.56■□□□□ 0.72
CLK3-225ENST00000569063 HBQ1P09105 142 aa19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms