RNA–Protein interactions for RNA: ENST00000568416.1

SPSB3-210, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

TSL 2

Gene SPSB3, Length 520 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-210ENST00000568416 PCID2Q5JVF3 399 aa18.24■□□□□ 0.51
SPSB3-210ENST00000568416 RHBDD2Q6NTF9 364 aa18.24■□□□□ 0.51
SPSB3-210ENST00000568416 LDB1Q86U70 411 aaPredicted RBP18.24■□□□□ 0.51
SPSB3-210ENST00000568416 DNAJC22Q8N4W6 341 aa18.24■□□□□ 0.51
SPSB3-210ENST00000568416 N4BP2L2Q92802 583 aaPredicted RBP18.24■□□□□ 0.51
SPSB3-210ENST00000568416 DHRS4Q9BTZ2 278 aa18.24■□□□□ 0.51
SPSB3-210ENST00000568416 MENTQ9BUN1 341 aa18.24■□□□□ 0.51
SPSB3-210ENST00000568416 CATSPERZQ9NTU4 200 aa18.24■□□□□ 0.51
SPSB3-210ENST00000568416 MARCH4Q9P2E8 410 aaPredicted RBP18.24■□□□□ 0.51
SPSB3-210ENST00000568416 DRG1Q9Y295 367 aaKnown RBP18.24■□□□□ 0.51
SPSB3-210ENST00000568416 ISM1B1AKI9 464 aa18.23■□□□□ 0.51
SPSB3-210ENST00000568416 C9J4A7 227 aa18.23■□□□□ 0.51
SPSB3-210ENST00000568416 RAB28P51157 221 aa18.23■□□□□ 0.51
SPSB3-210ENST00000568416 GRB7Q14451 532 aa18.23■□□□□ 0.51
SPSB3-210ENST00000568416 UNC5DQ6UXZ4 953 aa18.23■□□□□ 0.51
SPSB3-210ENST00000568416 MED25Q71SY5 747 aa18.23■□□□□ 0.51
SPSB3-210ENST00000568416 LINC01555Q8NAE3 123 aa18.23■□□□□ 0.51
SPSB3-210ENST00000568416 ASZ1Q8WWH4 475 aa18.23■□□□□ 0.51
SPSB3-210ENST00000568416 GBP5Q96PP8 586 aa18.23■□□□□ 0.51
SPSB3-210ENST00000568416 P2RY12Q9H244 342 aa18.23■□□□□ 0.51
SPSB3-210ENST00000568416 TREX1Q9NSU2 369 aa18.23■□□□□ 0.51
SPSB3-210ENST00000568416 ANAPC5Q9UJX4 755 aa18.23■□□□□ 0.51
SPSB3-210ENST00000568416 PCDHGB7Q9Y5F8 929 aa18.23■□□□□ 0.51
SPSB3-210ENST00000568416 SETXQ7Z333 2677 aaKnown RBP18.23■□□□□ 0.51
SPSB3-210ENST00000568416 PRMT5O14744 637 aaPredicted RBP18.22■□□□□ 0.51
SPSB3-210ENST00000568416 CD3EAPO15446 510 aaKnown RBP18.22■□□□□ 0.51
SPSB3-210ENST00000568416 KLF7O75840 302 aaPredicted RBP18.22■□□□□ 0.51
SPSB3-210ENST00000568416 APOA4P06727 396 aa18.22■□□□□ 0.51
SPSB3-210ENST00000568416 AOAHP28039 575 aa18.22■□□□□ 0.51
SPSB3-210ENST00000568416 SESN2P58004 480 aaPredicted RBP18.22■□□□□ 0.51
SPSB3-210ENST00000568416 C4orf22Q6V702 233 aa18.22■□□□□ 0.51
SPSB3-210ENST00000568416 ZNF662Q6ZS27 426 aa18.22■□□□□ 0.51
SPSB3-210ENST00000568416 FAM20CQ8IXL6 584 aa18.22■□□□□ 0.51
SPSB3-210ENST00000568416 KRT222Q8N1A0 295 aa18.22■□□□□ 0.51
SPSB3-210ENST00000568416 TMEM102Q8N9M5 508 aaPredicted RBP18.22■□□□□ 0.51
SPSB3-210ENST00000568416 PROKR1Q8TCW9 393 aa18.22■□□□□ 0.51
SPSB3-210ENST00000568416 C17orf62Q9BQA9 187 aa18.22■□□□□ 0.51
SPSB3-210ENST00000568416 PLCL2Q9UPR0 1127 aa18.22■□□□□ 0.51
SPSB3-210ENST00000568416 PADI2Q9Y2J8 665 aa18.22■□□□□ 0.51
SPSB3-210ENST00000568416 ZKSCAN5Q9Y2L8 839 aa18.22■□□□□ 0.51
SPSB3-210ENST00000568416 ZSCAN9O15535 394 aaPredicted RBP18.21■□□□□ 0.51
SPSB3-210ENST00000568416 SLCO2B1O94956 709 aa18.21■□□□□ 0.51
SPSB3-210ENST00000568416 RPN2P04844 631 aa18.21■□□□□ 0.51
SPSB3-210ENST00000568416 CD9P21926 228 aa18.21■□□□□ 0.51
SPSB3-210ENST00000568416 NPY2RP49146 381 aa18.21■□□□□ 0.51
SPSB3-210ENST00000568416 TTPAP49638 278 aa18.21■□□□□ 0.51
SPSB3-210ENST00000568416 CRADDP78560 199 aa18.21■□□□□ 0.51
SPSB3-210ENST00000568416 BASP1P80723 227 aaKnown RBP18.21■□□□□ 0.51
SPSB3-210ENST00000568416 SRSF1Q07955 248 aaKnown RBP eCLIP18.21■□□□□ 0.51
SPSB3-210ENST00000568416 ATP1A4Q13733 1029 aa18.21■□□□□ 0.51
SPSB3-210ENST00000568416 NADK2Q4G0N4 442 aa18.21■□□□□ 0.51
SPSB3-210ENST00000568416 C1orf189Q5VU69 101 aa18.21■□□□□ 0.51
SPSB3-210ENST00000568416 TLDC1Q6P9B6 456 aa18.21■□□□□ 0.51
SPSB3-210ENST00000568416 ATCAYQ86WG3 371 aa18.21■□□□□ 0.51
SPSB3-210ENST00000568416 RAB43Q86YS6 212 aa18.21■□□□□ 0.51
SPSB3-210ENST00000568416 DCUN1D3Q8IWE4 304 aa18.21■□□□□ 0.51
SPSB3-210ENST00000568416 FDCSPQ8NFU4 85 aa18.21■□□□□ 0.51
SPSB3-210ENST00000568416 NUDT9Q9BW91 350 aa18.21■□□□□ 0.51
SPSB3-210ENST00000568416 IL22Q9GZX6 179 aa18.21■□□□□ 0.51
SPSB3-210ENST00000568416 DHCR7Q9UBM7 475 aaKnown RBP18.21■□□□□ 0.51
SPSB3-210ENST00000568416 SRPK3Q9UPE1 567 aa18.21■□□□□ 0.51
SPSB3-210ENST00000568416 ZNF451Q9Y4E5 1061 aa18.21■□□□□ 0.51
SPSB3-210ENST00000568416 PCSK5Q92824 1860 aa18.2■□□□□ 0.5
SPSB3-210ENST00000568416 SPTA1P02549 2419 aa18.2■□□□□ 0.5
SPSB3-210ENST00000568416 ZNF185O15231 689 aa18.2■□□□□ 0.5
SPSB3-210ENST00000568416 MAGP20916 626 aa18.2■□□□□ 0.5
SPSB3-210ENST00000568416 NMBRP28336 390 aa18.2■□□□□ 0.5
SPSB3-210ENST00000568416 GCGRP47871 477 aa18.2■□□□□ 0.5
SPSB3-210ENST00000568416 RRADP55042 308 aa18.2■□□□□ 0.5
SPSB3-210ENST00000568416 DCDP81605 110 aaKnown RBP18.2■□□□□ 0.5
SPSB3-210ENST00000568416 TMED2Q15363 201 aa18.2■□□□□ 0.5
SPSB3-210ENST00000568416 MLIPQ5VWP3 458 aa18.2■□□□□ 0.5
SPSB3-210ENST00000568416 PTRHD1Q6GMV3 140 aaKnown RBP18.2■□□□□ 0.5
SPSB3-210ENST00000568416 MPP5Q8N3R9 675 aa18.2■□□□□ 0.5
SPSB3-210ENST00000568416 ZNF655Q8N720 491 aaPredicted RBP18.2■□□□□ 0.5
SPSB3-210ENST00000568416 LMNTD1Q8N9Z9 388 aa18.2■□□□□ 0.5
SPSB3-210ENST00000568416 OR2L8Q8NGY9 312 aa18.2■□□□□ 0.5
SPSB3-210ENST00000568416 CFAP61Q8NHU2 1237 aa18.2■□□□□ 0.5
SPSB3-210ENST00000568416 MAIP1Q8WWC4 291 aa18.2■□□□□ 0.5
SPSB3-210ENST00000568416 IL17FQ96PD4 163 aa18.2■□□□□ 0.5
SPSB3-210ENST00000568416 PANX3Q96QZ0 392 aa18.2■□□□□ 0.5
SPSB3-210ENST00000568416 LZTFL1Q9NQ48 299 aa18.2■□□□□ 0.5
SPSB3-210ENST00000568416 EURLQ9NYK6 297 aa18.2■□□□□ 0.5
SPSB3-210ENST00000568416 ANKMY1Q9P2S6 941 aa18.2■□□□□ 0.5
SPSB3-210ENST00000568416 CIDEBQ9UHD4 219 aa18.2■□□□□ 0.5
SPSB3-210ENST00000568416 KLHL20Q9Y2M5 609 aa18.2■□□□□ 0.5
SPSB3-210ENST00000568416 FLNBO75369 2602 aaKnown RBP18.19■□□□□ 0.5
SPSB3-210ENST00000568416 AP3B1O00203 1094 aa18.19■□□□□ 0.5
SPSB3-210ENST00000568416 RASGRF2O14827 1237 aa18.19■□□□□ 0.5
SPSB3-210ENST00000568416 CNOT3O75175 753 aaKnown RBP18.19■□□□□ 0.5
SPSB3-210ENST00000568416 SORBS2O94875 1100 aaKnown RBP18.19■□□□□ 0.5
SPSB3-210ENST00000568416 S1PR4O95977 384 aa18.19■□□□□ 0.5
SPSB3-210ENST00000568416 FGGP02679 453 aa18.19■□□□□ 0.5
SPSB3-210ENST00000568416 CD63P08962 238 aa18.19■□□□□ 0.5
SPSB3-210ENST00000568416 RPS3P23396 243 aaKnown RBP eCLIP18.19■□□□□ 0.5
SPSB3-210ENST00000568416 KCNJ1P48048 391 aa18.19■□□□□ 0.5
SPSB3-210ENST00000568416 SSPNQ14714 243 aa18.19■□□□□ 0.5
SPSB3-210ENST00000568416 MRPL14Q6P1L8 145 aaKnown RBP18.19■□□□□ 0.5
SPSB3-210ENST00000568416 LRRC6Q86X45 466 aa18.19■□□□□ 0.5
SPSB3-210ENST00000568416 C2orf73Q8N5S3 287 aaPredicted RBP18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms