RNA–Protein interactions for RNA: ENST00000567843.1

GTF3C1-208, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 474 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-208ENST00000567843 ZNF517Q6ZMY9 492 aaPredicted RBP11.8□□□□□ -0.52
GTF3C1-208ENST00000567843 NLRP9Q7RTR0 991 aa11.8□□□□□ -0.52
GTF3C1-208ENST00000567843 SPNS2Q8IVW8 549 aa11.8□□□□□ -0.52
GTF3C1-208ENST00000567843 GPR135Q8IZ08 494 aa11.8□□□□□ -0.52
GTF3C1-208ENST00000567843 OR5K2Q8NHB8 316 aa11.8□□□□□ -0.52
GTF3C1-208ENST00000567843 ING2Q9H160 280 aa11.8□□□□□ -0.52
GTF3C1-208ENST00000567843 ACSS2Q9NR19 701 aa11.8□□□□□ -0.52
GTF3C1-208ENST00000567843 SYBUQ9NX95 663 aa11.8□□□□□ -0.52
GTF3C1-208ENST00000567843 POLG2Q9UHN1 485 aa11.8□□□□□ -0.52
GTF3C1-208ENST00000567843 TCFL5Q9UL49 500 aa11.8□□□□□ -0.52
GTF3C1-208ENST00000567843 RIMKLBQ9ULI2 386 aa11.8□□□□□ -0.52
GTF3C1-208ENST00000567843 CDYLQ9Y232 598 aa11.8□□□□□ -0.52
GTF3C1-208ENST00000567843 DOPEY2Q9Y3R5 2298 aa11.8□□□□□ -0.52
GTF3C1-208ENST00000567843 UBR5O95071 2799 aaPredicted RBP11.79□□□□□ -0.52
GTF3C1-208ENST00000567843 ZNF185O15231 689 aa11.79□□□□□ -0.52
GTF3C1-208ENST00000567843 AVILO75366 819 aa11.79□□□□□ -0.52
GTF3C1-208ENST00000567843 MAGP20916 626 aa11.79□□□□□ -0.52
GTF3C1-208ENST00000567843 OTX2P32243 289 aa11.79□□□□□ -0.52
GTF3C1-208ENST00000567843 GRIA3P42263 894 aa11.79□□□□□ -0.52
GTF3C1-208ENST00000567843 GABRA4P48169 554 aa11.79□□□□□ -0.52
GTF3C1-208ENST00000567843 EIF3BP55884 814 aaKnown RBP11.79□□□□□ -0.52
GTF3C1-208ENST00000567843 FOXK1P85037 733 aa11.79□□□□□ -0.52
GTF3C1-208ENST00000567843 GRB7Q14451 532 aa11.79□□□□□ -0.52
GTF3C1-208ENST00000567843 CCSMST1Q4G0I0 132 aa11.79□□□□□ -0.52
GTF3C1-208ENST00000567843 IZUMO3Q5VZ72 239 aa11.79□□□□□ -0.52
GTF3C1-208ENST00000567843 LRRC8AQ8IWT6 810 aa11.79□□□□□ -0.52
GTF3C1-208ENST00000567843 SLC22A15Q8IZD6 547 aa11.79□□□□□ -0.52
GTF3C1-208ENST00000567843 ZNF655Q8N720 491 aaPredicted RBP11.79□□□□□ -0.52
GTF3C1-208ENST00000567843 LINC01555Q8NAE3 123 aa11.79□□□□□ -0.52
GTF3C1-208ENST00000567843 SKA2Q8WVK7 121 aaPredicted RBP11.79□□□□□ -0.52
GTF3C1-208ENST00000567843 MFSD3Q96ES6 412 aa11.79□□□□□ -0.52
GTF3C1-208ENST00000567843 LRFN5Q96NI6 719 aa11.79□□□□□ -0.52
GTF3C1-208ENST00000567843 TRIM56Q9BRZ2 755 aaKnown RBP11.79□□□□□ -0.52
GTF3C1-208ENST00000567843 CARD6Q9BX69 1037 aa11.79□□□□□ -0.52
GTF3C1-208ENST00000567843 NLNQ9BYT8 704 aa11.79□□□□□ -0.52
GTF3C1-208ENST00000567843 SYTL2Q9HCH5 934 aa11.79□□□□□ -0.52
GTF3C1-208ENST00000567843 OR6C2Q9NZP2 312 aa11.79□□□□□ -0.52
GTF3C1-208ENST00000567843 BFARQ9NZS9 450 aa11.79□□□□□ -0.52
GTF3C1-208ENST00000567843 LUZP4Q9P127 313 aa11.79□□□□□ -0.52
GTF3C1-208ENST00000567843 DHCR7Q9UBM7 475 aaKnown RBP11.79□□□□□ -0.52
GTF3C1-208ENST00000567843 DRG1Q9Y295 367 aaKnown RBP11.79□□□□□ -0.52
GTF3C1-208ENST00000567843 NFS1Q9Y697 457 aa11.79□□□□□ -0.52
GTF3C1-208ENST00000567843 TNRC6AQ8NDV7 1962 aaKnown RBP11.78□□□□□ -0.52
GTF3C1-208ENST00000567843 MASP2O00187 686 aa11.78□□□□□ -0.52
GTF3C1-208ENST00000567843 PRMT5O14744 637 aaPredicted RBP11.78□□□□□ -0.52
GTF3C1-208ENST00000567843 GPC4O75487 556 aa11.78□□□□□ -0.52
GTF3C1-208ENST00000567843 NDUFS3O75489 264 aa11.78□□□□□ -0.52
GTF3C1-208ENST00000567843 TMEM63AO94886 807 aa11.78□□□□□ -0.52
GTF3C1-208ENST00000567843 VAPBO95292 243 aa11.78□□□□□ -0.52
GTF3C1-208ENST00000567843 RECKO95980 971 aa11.78□□□□□ -0.52
GTF3C1-208ENST00000567843 APOA4P06727 396 aa11.78□□□□□ -0.52
GTF3C1-208ENST00000567843 RAB40ALP0C0E4 278 aa11.78□□□□□ -0.52
GTF3C1-208ENST00000567843 AGXTP21549 392 aa11.78□□□□□ -0.52
GTF3C1-208ENST00000567843 AOAHP28039 575 aa11.78□□□□□ -0.52
GTF3C1-208ENST00000567843 PKLRP30613 574 aa11.78□□□□□ -0.52
GTF3C1-208ENST00000567843 PPARGP37231 505 aaPredicted RBP11.78□□□□□ -0.52
GTF3C1-208ENST00000567843 BDKRB1P46663 353 aa11.78□□□□□ -0.52
GTF3C1-208ENST00000567843 NPY2RP49146 381 aa11.78□□□□□ -0.52
GTF3C1-208ENST00000567843 CCZ1BP86790 482 aa11.78□□□□□ -0.52
GTF3C1-208ENST00000567843 CCZ1P86791 482 aaPredicted RBP11.78□□□□□ -0.52
GTF3C1-208ENST00000567843 PLOD1Q02809 727 aaPredicted RBP11.78□□□□□ -0.52
GTF3C1-208ENST00000567843 ATP1A4Q13733 1029 aa11.78□□□□□ -0.52
GTF3C1-208ENST00000567843 NCF4Q15080 339 aa11.78□□□□□ -0.52
GTF3C1-208ENST00000567843 NADK2Q4G0N4 442 aa11.78□□□□□ -0.52
GTF3C1-208ENST00000567843 DNAJC21Q5F1R6 531 aaKnown RBP11.78□□□□□ -0.52
GTF3C1-208ENST00000567843 AARS2Q5JTZ9 985 aaKnown RBP11.78□□□□□ -0.52
GTF3C1-208ENST00000567843 APLFQ8IW19 511 aaPredicted RBP11.78□□□□□ -0.52
GTF3C1-208ENST00000567843 ZBTB2Q8N680 514 aa11.78□□□□□ -0.52
GTF3C1-208ENST00000567843 PRELID2Q8N945 189 aa11.78□□□□□ -0.52
GTF3C1-208ENST00000567843 ADAMTS17Q8TE56 1095 aa11.78□□□□□ -0.52
GTF3C1-208ENST00000567843 ASZ1Q8WWH4 475 aa11.78□□□□□ -0.52
GTF3C1-208ENST00000567843 THAP4Q8WY91 577 aa11.78□□□□□ -0.52
GTF3C1-208ENST00000567843 TCTN2Q96GX1 697 aa11.78□□□□□ -0.52
GTF3C1-208ENST00000567843 MS4A14Q96JA4 679 aa11.78□□□□□ -0.52
GTF3C1-208ENST00000567843 SLC25A23Q9BV35 468 aa11.78□□□□□ -0.52
GTF3C1-208ENST00000567843 TSSK1BQ9BXA7 367 aa11.78□□□□□ -0.52
GTF3C1-208ENST00000567843 TREX1Q9NSU2 369 aa11.78□□□□□ -0.52
GTF3C1-208ENST00000567843 IL1RAPL1Q9NZN1 696 aa11.78□□□□□ -0.52
GTF3C1-208ENST00000567843 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.78□□□□□ -0.52
GTF3C1-208ENST00000567843 NAV2Q8IVL1 2488 aa11.77□□□□□ -0.53
GTF3C1-208ENST00000567843 C9J4A7 227 aa11.77□□□□□ -0.53
GTF3C1-208ENST00000567843 F8W8V4 182 aa11.77□□□□□ -0.53
GTF3C1-208ENST00000567843 ZSCAN9O15535 394 aaPredicted RBP11.77□□□□□ -0.53
GTF3C1-208ENST00000567843 NIPSNAP2O75323 286 aa11.77□□□□□ -0.53
GTF3C1-208ENST00000567843 CD9P21926 228 aa11.77□□□□□ -0.53
GTF3C1-208ENST00000567843 ALAS2P22557 587 aa11.77□□□□□ -0.53
GTF3C1-208ENST00000567843 MCM3P25205 808 aa11.77□□□□□ -0.53
GTF3C1-208ENST00000567843 ARNTP27540 789 aa11.77□□□□□ -0.53
GTF3C1-208ENST00000567843 FMO4P31512 558 aa11.77□□□□□ -0.53
GTF3C1-208ENST00000567843 TTPAP49638 278 aa11.77□□□□□ -0.53
GTF3C1-208ENST00000567843 RAB28P51157 221 aa11.77□□□□□ -0.53
GTF3C1-208ENST00000567843 PGDP52209 483 aa11.77□□□□□ -0.53
GTF3C1-208ENST00000567843 GPS1Q13098 491 aa11.77□□□□□ -0.53
GTF3C1-208ENST00000567843 KIR2DS3Q14952 304 aa11.77□□□□□ -0.53
GTF3C1-208ENST00000567843 TMED2Q15363 201 aa11.77□□□□□ -0.53
GTF3C1-208ENST00000567843 SF1Q15637 639 aaKnown RBP11.77□□□□□ -0.53
GTF3C1-208ENST00000567843 KYNUQ16719 465 aa11.77□□□□□ -0.53
GTF3C1-208ENST00000567843 CTSL3PQ5NE16 218 aa11.77□□□□□ -0.53
GTF3C1-208ENST00000567843 ANKRD22Q5VYY1 191 aa11.77□□□□□ -0.53
GTF3C1-208ENST00000567843 ZNF385CQ66K41 422 aaPredicted RBP11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms