RNA–Protein interactions for RNA: ENST00000567071.5

CAPN3-216, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-216ENST00000567071 HES6Q96HZ4 224 aa9.35□□□□□ -0.91
CAPN3-216ENST00000567071 DMRTA2Q96SC8 542 aa9.35□□□□□ -0.91
CAPN3-216ENST00000567071 AGAP2Q99490 1192 aa9.35□□□□□ -0.91
CAPN3-216ENST00000567071 TIMM29Q9BSF4 260 aa9.35□□□□□ -0.91
CAPN3-216ENST00000567071 BDH2Q9BUT1 245 aa9.35□□□□□ -0.91
CAPN3-216ENST00000567071 SP110Q9HB58 689 aa9.35□□□□□ -0.91
CAPN3-216ENST00000567071 MRM3Q9HC36 420 aaKnown RBP9.35□□□□□ -0.91
CAPN3-216ENST00000567071 RASSF1Q9NS23 344 aa9.35□□□□□ -0.91
CAPN3-216ENST00000567071 PLA2G3Q9NZ20 509 aa9.35□□□□□ -0.91
CAPN3-216ENST00000567071 DNPEPQ9ULA0 475 aa9.35□□□□□ -0.91
CAPN3-216ENST00000567071 CDYLQ9Y232 598 aa9.35□□□□□ -0.91
CAPN3-216ENST00000567071 LRRD1A4D1F6 860 aa9.34□□□□□ -0.91
CAPN3-216ENST00000567071 MIF4GDA9UHW6 222 aaKnown RBP9.34□□□□□ -0.91
CAPN3-216ENST00000567071 SMAD7O15105 426 aaKnown RBP9.34□□□□□ -0.91
CAPN3-216ENST00000567071 URI1O94763 535 aaPredicted RBP9.34□□□□□ -0.91
CAPN3-216ENST00000567071 TOXO94900 526 aa9.34□□□□□ -0.91
CAPN3-216ENST00000567071 SIX3O95343 332 aaPredicted RBP9.34□□□□□ -0.91
CAPN3-216ENST00000567071 PRAMEF1O95521 474 aa9.34□□□□□ -0.91
CAPN3-216ENST00000567071 TUBB4AP04350 444 aa9.34□□□□□ -0.91
CAPN3-216ENST00000567071 CBSLP0DN79 551 aa9.34□□□□□ -0.91
CAPN3-216ENST00000567071 RARAP10276 462 aa9.34□□□□□ -0.91
CAPN3-216ENST00000567071 ZNF8P17098 575 aaPredicted RBP9.34□□□□□ -0.91
CAPN3-216ENST00000567071 ITGAXP20702 1163 aa9.34□□□□□ -0.91
CAPN3-216ENST00000567071 FDXRP22570 491 aa9.34□□□□□ -0.91
CAPN3-216ENST00000567071 CBSP35520 551 aa9.34□□□□□ -0.91
CAPN3-216ENST00000567071 PCK1P35558 622 aa9.34□□□□□ -0.91
CAPN3-216ENST00000567071 DRG2P55039 364 aaKnown RBP9.34□□□□□ -0.91
CAPN3-216ENST00000567071 ALDH6A1Q02252 535 aaKnown RBP9.34□□□□□ -0.91
CAPN3-216ENST00000567071 TFF3Q07654 80 aa9.34□□□□□ -0.91
CAPN3-216ENST00000567071 SLC9A5Q14940 896 aa9.34□□□□□ -0.91
CAPN3-216ENST00000567071 CA9Q16790 459 aa9.34□□□□□ -0.91
CAPN3-216ENST00000567071 NKAIN1Q4KMZ8 207 aa9.34□□□□□ -0.91
CAPN3-216ENST00000567071 ZNF789Q5FWF6 425 aa9.34□□□□□ -0.91
CAPN3-216ENST00000567071 ARMC12Q5T9G4 340 aa9.34□□□□□ -0.91
CAPN3-216ENST00000567071 AADACL2Q6P093 401 aa9.34□□□□□ -0.91
CAPN3-216ENST00000567071 RFLNAQ6ZTI6 216 aa9.34□□□□□ -0.91
CAPN3-216ENST00000567071 CEP128Q6ZU80 1094 aa9.34□□□□□ -0.91
CAPN3-216ENST00000567071 CYP4V2Q6ZWL3 525 aaPredicted RBP9.34□□□□□ -0.91
CAPN3-216ENST00000567071 BNIPLQ7Z465 357 aa9.34□□□□□ -0.91
CAPN3-216ENST00000567071 LRRTM4Q86VH4 590 aa9.34□□□□□ -0.91
CAPN3-216ENST00000567071 PAQR7Q86WK9 346 aa9.34□□□□□ -0.91
CAPN3-216ENST00000567071 CDC20BQ86Y33 519 aa9.34□□□□□ -0.91
CAPN3-216ENST00000567071 CCDC50Q8IVM0 306 aa9.34□□□□□ -0.91
CAPN3-216ENST00000567071 KBTBD2Q8IY47 623 aa9.34□□□□□ -0.91
CAPN3-216ENST00000567071 ZZZ3Q8IYH5 903 aa9.34□□□□□ -0.91
CAPN3-216ENST00000567071 GHDCQ8N2G8 530 aa9.34□□□□□ -0.91
CAPN3-216ENST00000567071 CPSF7Q8N684 471 aaKnown RBP9.34□□□□□ -0.91
CAPN3-216ENST00000567071 CAPZA3Q96KX2 299 aa9.34□□□□□ -0.91
CAPN3-216ENST00000567071 PWWP2AQ96N64 755 aa9.34□□□□□ -0.91
CAPN3-216ENST00000567071 MCCC1Q96RQ3 725 aaPredicted RBP9.34□□□□□ -0.91
CAPN3-216ENST00000567071 OSBPL9Q96SU4 736 aa9.34□□□□□ -0.91
CAPN3-216ENST00000567071 SNRNP25Q9BV90 132 aaKnown RBP9.34□□□□□ -0.91
CAPN3-216ENST00000567071 OR2AG1Q9H205 316 aa9.34□□□□□ -0.91
CAPN3-216ENST00000567071 STAU2Q9NUL3 570 aaKnown RBP eCLIP9.34□□□□□ -0.91
CAPN3-216ENST00000567071 PTGFRNQ9P2B2 879 aa9.34□□□□□ -0.91
CAPN3-216ENST00000567071 ATXN10Q9UBB4 475 aa9.34□□□□□ -0.91
CAPN3-216ENST00000567071 TRPS1Q9UHF7 1281 aa9.34□□□□□ -0.91
CAPN3-216ENST00000567071 SNX12Q9UMY4 172 aa9.34□□□□□ -0.91
CAPN3-216ENST00000567071 AP4E1Q9UPM8 1137 aa9.34□□□□□ -0.91
CAPN3-216ENST00000567071 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.34□□□□□ -0.91
CAPN3-216ENST00000567071 PCDHA3Q9Y5H8 950 aa9.34□□□□□ -0.91
CAPN3-216ENST00000567071 NOTCH1P46531 2555 aa9.34□□□□□ -0.91
CAPN3-216ENST00000567071 TGP01266 2768 aa9.33□□□□□ -0.92
CAPN3-216ENST00000567071 CUBNO60494 3623 aa9.33□□□□□ -0.92
CAPN3-216ENST00000567071 ANK2Q01484 3957 aa9.33□□□□□ -0.92
CAPN3-216ENST00000567071 GSAPA4D1B5 854 aa9.33□□□□□ -0.92
CAPN3-216ENST00000567071 OR6C74A6NCV1 312 aa9.33□□□□□ -0.92
CAPN3-216ENST00000567071 FGF10O15520 208 aaPredicted RBP9.33□□□□□ -0.92
CAPN3-216ENST00000567071 CEP104O60308 925 aa9.33□□□□□ -0.92
CAPN3-216ENST00000567071 ATE1O95260 518 aa9.33□□□□□ -0.92
CAPN3-216ENST00000567071 CTPS1P17812 591 aa9.33□□□□□ -0.92
CAPN3-216ENST00000567071 CTSCP53634 463 aa9.33□□□□□ -0.92
CAPN3-216ENST00000567071 EPHB1P54762 984 aa9.33□□□□□ -0.92
CAPN3-216ENST00000567071 RWDD2BP57060 319 aa9.33□□□□□ -0.92
CAPN3-216ENST00000567071 PMP22Q01453 160 aa9.33□□□□□ -0.92
CAPN3-216ENST00000567071 KRT81Q14533 505 aa9.33□□□□□ -0.92
CAPN3-216ENST00000567071 PCBP2Q15366 365 aaKnown RBP eCLIP9.33□□□□□ -0.92
CAPN3-216ENST00000567071 ODF2Q5BJF6 829 aa9.33□□□□□ -0.92
CAPN3-216ENST00000567071 PPP6R3Q5H9R7 873 aaPredicted RBP9.33□□□□□ -0.92
CAPN3-216ENST00000567071 RHBDD2Q6NTF9 364 aa9.33□□□□□ -0.92
CAPN3-216ENST00000567071 MRPL14Q6P1L8 145 aaKnown RBP9.33□□□□□ -0.92
CAPN3-216ENST00000567071 POLNQ7Z5Q5 900 aa9.33□□□□□ -0.92
CAPN3-216ENST00000567071 DOLPP1Q86YN1 238 aa9.33□□□□□ -0.92
CAPN3-216ENST00000567071 P3H2Q8IVL5 708 aa9.33□□□□□ -0.92
CAPN3-216ENST00000567071 RAVER1Q8IY67 606 aaKnown RBP9.33□□□□□ -0.92
CAPN3-216ENST00000567071 KATNAL2Q8IYT4 538 aa9.33□□□□□ -0.92
CAPN3-216ENST00000567071 RAPGEF5Q92565 580 aa9.33□□□□□ -0.92
CAPN3-216ENST00000567071 RND1Q92730 232 aa9.33□□□□□ -0.92
CAPN3-216ENST00000567071 MAGEB5Q9BZ81 275 aa9.33□□□□□ -0.92
CAPN3-216ENST00000567071 UCK2Q9BZX2 261 aa9.33□□□□□ -0.92
CAPN3-216ENST00000567071 DHX35Q9H5Z1 703 aaKnown RBP9.33□□□□□ -0.92
CAPN3-216ENST00000567071 SMARCAL1Q9NZC9 954 aa9.33□□□□□ -0.92
CAPN3-216ENST00000567071 SAR1BQ9Y6B6 198 aa9.33□□□□□ -0.92
CAPN3-216ENST00000567071 ARID1AO14497 2285 aa9.32□□□□□ -0.92
CAPN3-216ENST00000567071 MATN2O00339 956 aa9.32□□□□□ -0.92
CAPN3-216ENST00000567071 TTI1O43156 1089 aa9.32□□□□□ -0.92
CAPN3-216ENST00000567071 KLK8O60259 260 aa9.32□□□□□ -0.92
CAPN3-216ENST00000567071 SLC25A14O95258 325 aaPredicted RBP9.32□□□□□ -0.92
CAPN3-216ENST00000567071 F10P00742 488 aa9.32□□□□□ -0.92
CAPN3-216ENST00000567071 CD48P09326 243 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms