RNA–Protein interactions for RNA: ENST00000566292.5

USB1-213, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-213ENST00000566292 GPR135Q8IZ08 494 aa17.67■□□□□ 0.42
USB1-213ENST00000566292 KRT222Q8N1A0 295 aa17.67■□□□□ 0.42
USB1-213ENST00000566292 ZBTB2Q8N680 514 aa17.67■□□□□ 0.42
USB1-213ENST00000566292 LMNTD1Q8N9Z9 388 aa17.67■□□□□ 0.42
USB1-213ENST00000566292 LINC01555Q8NAE3 123 aa17.67■□□□□ 0.42
USB1-213ENST00000566292 DPH2Q9BQC3 489 aaPredicted RBP17.67■□□□□ 0.42
USB1-213ENST00000566292 MENTQ9BUN1 341 aa17.67■□□□□ 0.42
USB1-213ENST00000566292 EIF2B3Q9NR50 452 aaKnown RBP17.67■□□□□ 0.42
USB1-213ENST00000566292 CATSPERZQ9NTU4 200 aa17.67■□□□□ 0.42
USB1-213ENST00000566292 MAST4O15021 2626 aa17.67■□□□□ 0.42
USB1-213ENST00000566292 ISM1B1AKI9 464 aa17.66■□□□□ 0.42
USB1-213ENST00000566292 F8W8V4 182 aa17.66■□□□□ 0.42
USB1-213ENST00000566292 CEACAM4O75871 244 aa17.66■□□□□ 0.42
USB1-213ENST00000566292 OR2B3O76000 313 aa17.66■□□□□ 0.42
USB1-213ENST00000566292 TMEM63AO94886 807 aa17.66■□□□□ 0.42
USB1-213ENST00000566292 HBQ1P09105 142 aa17.66■□□□□ 0.42
USB1-213ENST00000566292 CBSLP0DN79 551 aa17.66■□□□□ 0.42
USB1-213ENST00000566292 CBSP35520 551 aa17.66■□□□□ 0.42
USB1-213ENST00000566292 PPARGP37231 505 aaPredicted RBP17.66■□□□□ 0.42
USB1-213ENST00000566292 PGDP52209 483 aa17.66■□□□□ 0.42
USB1-213ENST00000566292 SESN2P58004 480 aaPredicted RBP17.66■□□□□ 0.42
USB1-213ENST00000566292 GRB7Q14451 532 aa17.66■□□□□ 0.42
USB1-213ENST00000566292 KIR2DS3Q14952 304 aa17.66■□□□□ 0.42
USB1-213ENST00000566292 KYNUQ16719 465 aa17.66■□□□□ 0.42
USB1-213ENST00000566292 KCTD19Q17RG1 926 aaPredicted RBP17.66■□□□□ 0.42
USB1-213ENST00000566292 SLC5A12Q1EHB4 618 aa17.66■□□□□ 0.42
USB1-213ENST00000566292 PAPD7Q5XG87 772 aaKnown RBP17.66■□□□□ 0.42
USB1-213ENST00000566292 DNAJC22Q8N4W6 341 aa17.66■□□□□ 0.42
USB1-213ENST00000566292 ASZ1Q8WWH4 475 aa17.66■□□□□ 0.42
USB1-213ENST00000566292 N4BP2L2Q92802 583 aaPredicted RBP17.66■□□□□ 0.42
USB1-213ENST00000566292 TREX1Q9NSU2 369 aa17.66■□□□□ 0.42
USB1-213ENST00000566292 CIDEBQ9UHD4 219 aa17.66■□□□□ 0.42
USB1-213ENST00000566292 DRG1Q9Y295 367 aaKnown RBP17.66■□□□□ 0.42
USB1-213ENST00000566292 SHANK1Q9Y566 2161 aa17.66■□□□□ 0.42
USB1-213ENST00000566292 NUP210LQ5VU65 1888 aa17.65■□□□□ 0.42
USB1-213ENST00000566292 C9J4A7 227 aa17.65■□□□□ 0.42
USB1-213ENST00000566292 PRMT5O14744 637 aaPredicted RBP17.65■□□□□ 0.42
USB1-213ENST00000566292 KLF7O75840 302 aaPredicted RBP17.65■□□□□ 0.42
USB1-213ENST00000566292 SLCO2B1O94956 709 aa17.65■□□□□ 0.42
USB1-213ENST00000566292 AGXTP21549 392 aa17.65■□□□□ 0.42
USB1-213ENST00000566292 AOAHP28039 575 aa17.65■□□□□ 0.42
USB1-213ENST00000566292 NMBRP28336 390 aa17.65■□□□□ 0.42
USB1-213ENST00000566292 CD97P48960 835 aa17.65■□□□□ 0.42
USB1-213ENST00000566292 RAB28P51157 221 aa17.65■□□□□ 0.42
USB1-213ENST00000566292 AARS2Q5JTZ9 985 aaKnown RBP17.65■□□□□ 0.42
USB1-213ENST00000566292 C1orf189Q5VU69 101 aa17.65■□□□□ 0.42
USB1-213ENST00000566292 RHBDD2Q6NTF9 364 aa17.65■□□□□ 0.42
USB1-213ENST00000566292 CFAP61Q8NHU2 1237 aa17.65■□□□□ 0.42
USB1-213ENST00000566292 IL17FQ96PD4 163 aa17.65■□□□□ 0.42
USB1-213ENST00000566292 GBP5Q96PP8 586 aa17.65■□□□□ 0.42
USB1-213ENST00000566292 TSSK1BQ9BXA7 367 aa17.65■□□□□ 0.42
USB1-213ENST00000566292 LZTFL1Q9NQ48 299 aa17.65■□□□□ 0.42
USB1-213ENST00000566292 ANAPC5Q9UJX4 755 aa17.65■□□□□ 0.42
USB1-213ENST00000566292 KLHL20Q9Y2M5 609 aa17.65■□□□□ 0.42
USB1-213ENST00000566292 AP1M2Q9Y6Q5 423 aa17.65■□□□□ 0.42
USB1-213ENST00000566292 USP9XQ93008 2570 aaPredicted RBP17.65■□□□□ 0.42
USB1-213ENST00000566292 CLEC18AA5D8T8 446 aa17.64■□□□□ 0.41
USB1-213ENST00000566292 CD3EAPO15446 510 aaKnown RBP17.64■□□□□ 0.41
USB1-213ENST00000566292 KDM1AO60341 852 aa17.64■□□□□ 0.41
USB1-213ENST00000566292 FGGP02679 453 aa17.64■□□□□ 0.41
USB1-213ENST00000566292 APOA4P06727 396 aa17.64■□□□□ 0.41
USB1-213ENST00000566292 MAGP20916 626 aa17.64■□□□□ 0.41
USB1-213ENST00000566292 KCNJ1P48048 391 aa17.64■□□□□ 0.41
USB1-213ENST00000566292 TTPAP49638 278 aa17.64■□□□□ 0.41
USB1-213ENST00000566292 BASP1P80723 227 aaKnown RBP17.64■□□□□ 0.41
USB1-213ENST00000566292 SRSF1Q07955 248 aaKnown RBP eCLIP17.64■□□□□ 0.41
USB1-213ENST00000566292 ATP1A4Q13733 1029 aa17.64■□□□□ 0.41
USB1-213ENST00000566292 UBAP2LQ14157 1087 aaKnown RBP17.64■□□□□ 0.41
USB1-213ENST00000566292 NADK2Q4G0N4 442 aa17.64■□□□□ 0.41
USB1-213ENST00000566292 CLEC18BQ6UXF7 455 aa17.64■□□□□ 0.41
USB1-213ENST00000566292 ZNF662Q6ZS27 426 aa17.64■□□□□ 0.41
USB1-213ENST00000566292 DCUN1D3Q8IWE4 304 aa17.64■□□□□ 0.41
USB1-213ENST00000566292 C2orf73Q8N5S3 287 aaPredicted RBP17.64■□□□□ 0.41
USB1-213ENST00000566292 ZNF655Q8N720 491 aaPredicted RBP17.64■□□□□ 0.41
USB1-213ENST00000566292 CLEC18CQ8NCF0 446 aa17.64■□□□□ 0.41
USB1-213ENST00000566292 DHRS4Q9BTZ2 278 aa17.64■□□□□ 0.41
USB1-213ENST00000566292 P2RY12Q9H244 342 aa17.64■□□□□ 0.41
USB1-213ENST00000566292 DHCR7Q9UBM7 475 aaKnown RBP17.64■□□□□ 0.41
USB1-213ENST00000566292 ZKSCAN5Q9Y2L8 839 aa17.64■□□□□ 0.41
USB1-213ENST00000566292 NAV2Q8IVL1 2488 aa17.64■□□□□ 0.41
USB1-213ENST00000566292 PCM1Q15154 2024 aa17.64■□□□□ 0.41
USB1-213ENST00000566292 RP1L1Q8IWN7 2480 aaPredicted RBP17.63■□□□□ 0.41
USB1-213ENST00000566292 ZNF185O15231 689 aa17.63■□□□□ 0.41
USB1-213ENST00000566292 ZSCAN9O15535 394 aaPredicted RBP17.63■□□□□ 0.41
USB1-213ENST00000566292 ATXN8OSP0DMR3 200 aa17.63■□□□□ 0.41
USB1-213ENST00000566292 CD9P21926 228 aa17.63■□□□□ 0.41
USB1-213ENST00000566292 ARNTP27540 789 aa17.63■□□□□ 0.41
USB1-213ENST00000566292 NPY2RP49146 381 aa17.63■□□□□ 0.41
USB1-213ENST00000566292 MLIPQ5VWP3 458 aa17.63■□□□□ 0.41
USB1-213ENST00000566292 UNC5DQ6UXZ4 953 aa17.63■□□□□ 0.41
USB1-213ENST00000566292 TAX1BP1Q86VP1 789 aa17.63■□□□□ 0.41
USB1-213ENST00000566292 TMEM151BQ8IW70 566 aa17.63■□□□□ 0.41
USB1-213ENST00000566292 TMEM102Q8N9M5 508 aaPredicted RBP17.63■□□□□ 0.41
USB1-213ENST00000566292 FDCSPQ8NFU4 85 aa17.63■□□□□ 0.41
USB1-213ENST00000566292 NUDT9Q9BW91 350 aa17.63■□□□□ 0.41
USB1-213ENST00000566292 IL22Q9GZX6 179 aa17.63■□□□□ 0.41
USB1-213ENST00000566292 PLCL2Q9UPR0 1127 aa17.63■□□□□ 0.41
USB1-213ENST00000566292 PADI2Q9Y2J8 665 aa17.63■□□□□ 0.41
USB1-213ENST00000566292 PRRC2CQ9Y520 2896 aaKnown RBP17.63■□□□□ 0.41
USB1-213ENST00000566292 TCRBV7S3A2A0A539 114 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms