RNA–Protein interactions for RNA: ENST00000565990.2

SF3B3-206, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-206ENST00000565990 MPP2Q14168 576 aa12.29□□□□□ -0.44
SF3B3-206ENST00000565990 NR0B2Q15466 257 aa12.29□□□□□ -0.44
SF3B3-206ENST00000565990 SEPT7Q16181 437 aaKnown RBP12.29□□□□□ -0.44
SF3B3-206ENST00000565990 SYTL3Q4VX76 610 aa12.29□□□□□ -0.44
SF3B3-206ENST00000565990 TRIM42Q8IWZ5 723 aa12.29□□□□□ -0.44
SF3B3-206ENST00000565990 RBM12BQ8IXT5 1001 aaKnown RBP12.29□□□□□ -0.44
SF3B3-206ENST00000565990 TBC1D21Q8IYX1 336 aa12.29□□□□□ -0.44
SF3B3-206ENST00000565990 FBXO15Q8NCQ5 510 aaPredicted RBP12.29□□□□□ -0.44
SF3B3-206ENST00000565990 PHC3Q8NDX5 983 aa12.29□□□□□ -0.44
SF3B3-206ENST00000565990 MAPK15Q8TD08 544 aa12.29□□□□□ -0.44
SF3B3-206ENST00000565990 SLC37A2Q8TED4 501 aa12.29□□□□□ -0.44
SF3B3-206ENST00000565990 FAM122AQ96E09 287 aa12.29□□□□□ -0.44
SF3B3-206ENST00000565990 C12orf66Q96MD2 445 aa12.29□□□□□ -0.44
SF3B3-206ENST00000565990 CAMK1GQ96NX5 476 aa12.29□□□□□ -0.44
SF3B3-206ENST00000565990 MYCBPQ99417 103 aaPredicted RBP12.29□□□□□ -0.44
SF3B3-206ENST00000565990 CDC6Q99741 560 aa12.29□□□□□ -0.44
SF3B3-206ENST00000565990 TWSG1Q9GZX9 223 aa12.29□□□□□ -0.44
SF3B3-206ENST00000565990 MVB12BQ9H7P6 319 aa12.29□□□□□ -0.44
SF3B3-206ENST00000565990 POT1Q9NUX5 634 aa12.29□□□□□ -0.44
SF3B3-206ENST00000565990 MKS1Q9NXB0 559 aa12.29□□□□□ -0.44
SF3B3-206ENST00000565990 SIRPGQ9P1W8 387 aa12.29□□□□□ -0.44
SF3B3-206ENST00000565990 FAM8A1Q9UBU6 413 aa12.29□□□□□ -0.44
SF3B3-206ENST00000565990 ACOT9Q9Y305 439 aa12.29□□□□□ -0.44
SF3B3-206ENST00000565990 PRAMEF33A0A0G2JMD5 474 aa12.28□□□□□ -0.44
SF3B3-206ENST00000565990 TRIM49D1C9J1S8 452 aa12.28□□□□□ -0.44
SF3B3-206ENST00000565990 SLC16A5O15375 505 aa12.28□□□□□ -0.44
SF3B3-206ENST00000565990 TNFSF14O43557 240 aa12.28□□□□□ -0.44
SF3B3-206ENST00000565990 MPOP05164 745 aa12.28□□□□□ -0.44
SF3B3-206ENST00000565990 TROVE2P10155 538 aaKnown RBP eCLIP12.28□□□□□ -0.44
SF3B3-206ENST00000565990 COL6A2P12110 1019 aa12.28□□□□□ -0.44
SF3B3-206ENST00000565990 MYF5P13349 255 aa12.28□□□□□ -0.44
SF3B3-206ENST00000565990 KRT15P19012 456 aa12.28□□□□□ -0.44
SF3B3-206ENST00000565990 NDUFS1P28331 727 aa12.28□□□□□ -0.44
SF3B3-206ENST00000565990 TYK2P29597 1187 aa12.28□□□□□ -0.44
SF3B3-206ENST00000565990 GPR3P46089 330 aa12.28□□□□□ -0.44
SF3B3-206ENST00000565990 RGS4P49798 205 aa12.28□□□□□ -0.44
SF3B3-206ENST00000565990 SERPINB8P50452 374 aa12.28□□□□□ -0.44
SF3B3-206ENST00000565990 DUSP3P51452 185 aaPredicted RBP12.28□□□□□ -0.44
SF3B3-206ENST00000565990 CCNG1P51959 295 aa12.28□□□□□ -0.44
SF3B3-206ENST00000565990 MAZP56270 477 aaKnown RBP12.28□□□□□ -0.44
SF3B3-206ENST00000565990 SQSTM1Q13501 440 aa12.28□□□□□ -0.44
SF3B3-206ENST00000565990 GRB7Q14451 532 aa12.28□□□□□ -0.44
SF3B3-206ENST00000565990 HHATQ5VTY9 493 aa12.28□□□□□ -0.44
SF3B3-206ENST00000565990 FAM91A1Q658Y4 838 aa12.28□□□□□ -0.44
SF3B3-206ENST00000565990 TMEM26Q6ZUK4 368 aa12.28□□□□□ -0.44
SF3B3-206ENST00000565990 CMC1Q7Z7K0 106 aa12.28□□□□□ -0.44
SF3B3-206ENST00000565990 KYQ8NBH2 561 aa12.28□□□□□ -0.44
SF3B3-206ENST00000565990 OR5K2Q8NHB8 316 aa12.28□□□□□ -0.44
SF3B3-206ENST00000565990 MGARPQ8TDB4 240 aa12.28□□□□□ -0.44
SF3B3-206ENST00000565990 SH3KBP1Q96B97 665 aa12.28□□□□□ -0.44
SF3B3-206ENST00000565990 CNDP2Q96KP4 475 aaKnown RBP12.28□□□□□ -0.44
SF3B3-206ENST00000565990 GPR78Q96P69 363 aa12.28□□□□□ -0.44
SF3B3-206ENST00000565990 SLC12A9Q9BXP2 914 aa12.28□□□□□ -0.44
SF3B3-206ENST00000565990 DERL2Q9GZP9 239 aa12.28□□□□□ -0.44
SF3B3-206ENST00000565990 LRMDAQ9H2I8 198 aa12.28□□□□□ -0.44
SF3B3-206ENST00000565990 TFB2MQ9H5Q4 396 aaKnown RBP12.28□□□□□ -0.44
SF3B3-206ENST00000565990 BATF3Q9NR55 127 aa12.28□□□□□ -0.44
SF3B3-206ENST00000565990 SNX15Q9NRS6 342 aa12.28□□□□□ -0.44
SF3B3-206ENST00000565990 LRIT1Q9P2V4 623 aa12.28□□□□□ -0.44
SF3B3-206ENST00000565990 CTNNAL1Q9UBT7 734 aa12.28□□□□□ -0.44
SF3B3-206ENST00000565990 POLG2Q9UHN1 485 aa12.28□□□□□ -0.44
SF3B3-206ENST00000565990 MCM8Q9UJA3 840 aa12.28□□□□□ -0.44
SF3B3-206ENST00000565990 RNF215Q9Y6U7 377 aa12.28□□□□□ -0.44
SF3B3-206ENST00000565990 A0A087X1B8 175 aa12.27□□□□□ -0.45
SF3B3-206ENST00000565990 A0A096LPK6 155 aa12.27□□□□□ -0.45
SF3B3-206ENST00000565990 A0A1W2PPM1 405 aa12.27□□□□□ -0.45
SF3B3-206ENST00000565990 CCDC189A1A4V9 331 aa12.27□□□□□ -0.45
SF3B3-206ENST00000565990 KLF11O14901 512 aa12.27□□□□□ -0.45
SF3B3-206ENST00000565990 PHGDHO43175 533 aaKnown RBP12.27□□□□□ -0.45
SF3B3-206ENST00000565990 DKK1O94907 266 aa12.27□□□□□ -0.45
SF3B3-206ENST00000565990 KLHL2O95198 593 aa12.27□□□□□ -0.45
SF3B3-206ENST00000565990 C1orf105O95561 183 aa12.27□□□□□ -0.45
SF3B3-206ENST00000565990 VIPP01282 170 aa12.27□□□□□ -0.45
SF3B3-206ENST00000565990 GP1BAP07359 652 aa12.27□□□□□ -0.45
SF3B3-206ENST00000565990 C8GP07360 202 aa12.27□□□□□ -0.45
SF3B3-206ENST00000565990 CCDC166P0CW27 439 aa12.27□□□□□ -0.45
SF3B3-206ENST00000565990 CD1DP15813 335 aa12.27□□□□□ -0.45
SF3B3-206ENST00000565990 CCNFP41002 786 aa12.27□□□□□ -0.45
SF3B3-206ENST00000565990 ATP6V0D1P61421 351 aa12.27□□□□□ -0.45
SF3B3-206ENST00000565990 HHEXQ03014 270 aa12.27□□□□□ -0.45
SF3B3-206ENST00000565990 DLG1Q12959 904 aa12.27□□□□□ -0.45
SF3B3-206ENST00000565990 ZNF460Q14592 562 aa12.27□□□□□ -0.45
SF3B3-206ENST00000565990 CMPK2Q5EBM0 449 aa12.27□□□□□ -0.45
SF3B3-206ENST00000565990 PPM1JQ5JR12 505 aa12.27□□□□□ -0.45
SF3B3-206ENST00000565990 CLEC14AQ86T13 490 aa12.27□□□□□ -0.45
SF3B3-206ENST00000565990 ISCA2Q86U28 154 aa12.27□□□□□ -0.45
SF3B3-206ENST00000565990 RAB3IL1Q8TBN0 382 aa12.27□□□□□ -0.45
SF3B3-206ENST00000565990 ACMSDQ8TDX5 336 aa12.27□□□□□ -0.45
SF3B3-206ENST00000565990 DLG3Q92796 817 aa12.27□□□□□ -0.45
SF3B3-206ENST00000565990 CXorf40BQ96DE9 158 aa12.27□□□□□ -0.45
SF3B3-206ENST00000565990 LINGO1Q96FE5 620 aa12.27□□□□□ -0.45
SF3B3-206ENST00000565990 FOPNLQ96NB1 174 aa12.27□□□□□ -0.45
SF3B3-206ENST00000565990 FERD3LQ96RJ6 166 aa12.27□□□□□ -0.45
SF3B3-206ENST00000565990 MENTQ9BUN1 341 aa12.27□□□□□ -0.45
SF3B3-206ENST00000565990 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.27□□□□□ -0.45
SF3B3-206ENST00000565990 TRIT1Q9H3H1 467 aaKnown RBP12.27□□□□□ -0.45
SF3B3-206ENST00000565990 KIR3DX1Q9H7L2 352 aa12.27□□□□□ -0.45
SF3B3-206ENST00000565990 IGSF5Q9NSI5 407 aa12.27□□□□□ -0.45
SF3B3-206ENST00000565990 NOP53Q9NZM5 478 aaKnown RBP12.27□□□□□ -0.45
SF3B3-206ENST00000565990 LNPEPQ9UIQ6 1025 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms