RNA–Protein interactions for RNA: ENST00000565832.5

CHD9-217, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best)

Gene CHD9, Length 2,169 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-217ENST00000565832 PEAR1Q5VY43 1037 aaPredicted RBP6.07□□□□□ -1.44
CHD9-217ENST00000565832 KANK2Q63ZY3 851 aa6.07□□□□□ -1.44
CHD9-217ENST00000565832 TBC1D3GQ6DHY5 549 aa6.07□□□□□ -1.44
CHD9-217ENST00000565832 TBC1D3CQ6IPX1 549 aa6.07□□□□□ -1.44
CHD9-217ENST00000565832 GTF2H2CQ6P1K8 395 aa6.07□□□□□ -1.44
CHD9-217ENST00000565832 PNCKQ6P2M8 343 aa6.07□□□□□ -1.44
CHD9-217ENST00000565832 CYB5D1Q6P9G0 228 aa6.07□□□□□ -1.44
CHD9-217ENST00000565832 FAM83HQ6ZRV2 1179 aaPredicted RBP6.07□□□□□ -1.44
CHD9-217ENST00000565832 ACAD11Q709F0 780 aa6.07□□□□□ -1.44
CHD9-217ENST00000565832 DSG4Q86SJ6 1040 aa6.07□□□□□ -1.44
CHD9-217ENST00000565832 HEATR4Q86WZ0 1026 aa6.07□□□□□ -1.44
CHD9-217ENST00000565832 MYLK4Q86YV6 388 aaPredicted RBP6.07□□□□□ -1.44
CHD9-217ENST00000565832 NRSN1Q8IZ57 195 aa6.07□□□□□ -1.44
CHD9-217ENST00000565832 TBC1D3Q8IZP1 549 aaPredicted RBP6.07□□□□□ -1.44
CHD9-217ENST00000565832 FRMD1Q8N878 549 aa6.07□□□□□ -1.44
CHD9-217ENST00000565832 PPFIBP2Q8ND30 876 aa6.07□□□□□ -1.44
CHD9-217ENST00000565832 OR4F6Q8NGB9 312 aa6.07□□□□□ -1.44
CHD9-217ENST00000565832 CEP70Q8NHQ1 597 aa6.07□□□□□ -1.44
CHD9-217ENST00000565832 RPLP0P6Q8NHW5 317 aa6.07□□□□□ -1.44
CHD9-217ENST00000565832 ASZ1Q8WWH4 475 aa6.07□□□□□ -1.44
CHD9-217ENST00000565832 ATP6V1E2Q96A05 226 aa6.07□□□□□ -1.44
CHD9-217ENST00000565832 C19orf60Q96EN9 201 aa6.07□□□□□ -1.44
CHD9-217ENST00000565832 NECTIN4Q96NY8 510 aa6.07□□□□□ -1.44
CHD9-217ENST00000565832 VPS35Q96QK1 796 aa6.07□□□□□ -1.44
CHD9-217ENST00000565832 CCM2Q9BSQ5 444 aa6.07□□□□□ -1.44
CHD9-217ENST00000565832 TRMOQ9BU70 441 aa6.07□□□□□ -1.44
CHD9-217ENST00000565832 CD244Q9BZW8 370 aa6.07□□□□□ -1.44
CHD9-217ENST00000565832 STN1Q9H668 368 aaKnown RBP6.07□□□□□ -1.44
CHD9-217ENST00000565832 CD248Q9HCU0 757 aa6.07□□□□□ -1.44
CHD9-217ENST00000565832 CCDC167Q9P0B6 97 aa6.07□□□□□ -1.44
CHD9-217ENST00000565832 GMPR2Q9P2T1 348 aaKnown RBP6.07□□□□□ -1.44
CHD9-217ENST00000565832 LNPEPQ9UIQ6 1025 aa6.07□□□□□ -1.44
CHD9-217ENST00000565832 NDRG2Q9UN36 371 aaKnown RBP6.07□□□□□ -1.44
CHD9-217ENST00000565832 SLC22A14Q9Y267 594 aa6.07□□□□□ -1.44
CHD9-217ENST00000565832 CA5BQ9Y2D0 317 aa6.07□□□□□ -1.44
CHD9-217ENST00000565832 RNF11Q9Y3C5 154 aa6.07□□□□□ -1.44
CHD9-217ENST00000565832 CFAP20Q9Y6A4 193 aaKnown RBP6.07□□□□□ -1.44
CHD9-217ENST00000565832 BDP1A6H8Y1 2624 aa6.07□□□□□ -1.44
CHD9-217ENST00000565832 TRPC5OSA6NMA1 111 aa6.07□□□□□ -1.44
CHD9-217ENST00000565832 LOC730098B7Z3J9 87 aa6.07□□□□□ -1.44
CHD9-217ENST00000565832 SLCO1B7G3V0H7 640 aa6.07□□□□□ -1.44
CHD9-217ENST00000565832 GFYI3L273 518 aa6.07□□□□□ -1.44
CHD9-217ENST00000565832 PSMD11O00231 422 aa6.07□□□□□ -1.44
CHD9-217ENST00000565832 AIM2O14862 343 aa6.07□□□□□ -1.44
CHD9-217ENST00000565832 SLC31A1O15431 190 aa6.07□□□□□ -1.44
CHD9-217ENST00000565832 MBTPS2O43462 519 aa6.07□□□□□ -1.44
CHD9-217ENST00000565832 PRAMEF4O60810 478 aa6.07□□□□□ -1.44
CHD9-217ENST00000565832 RNASEH1O60930 286 aaKnown RBP6.07□□□□□ -1.44
CHD9-217ENST00000565832 ATG13O75143 517 aa6.07□□□□□ -1.44
CHD9-217ENST00000565832 ENTPD5O75356 428 aa6.07□□□□□ -1.44
CHD9-217ENST00000565832 POP7O75817 140 aaKnown RBP6.07□□□□□ -1.44
CHD9-217ENST00000565832 ATP5HO75947 161 aa6.07□□□□□ -1.44
CHD9-217ENST00000565832 TM7SF2O76062 418 aa6.07□□□□□ -1.44
CHD9-217ENST00000565832 COX4I1P13073 169 aa6.07□□□□□ -1.44
CHD9-217ENST00000565832 HOXB2P14652 356 aa6.07□□□□□ -1.44
CHD9-217ENST00000565832 EPORP19235 508 aa6.07□□□□□ -1.44
CHD9-217ENST00000565832 ITPKAP23677 461 aa6.07□□□□□ -1.44
CHD9-217ENST00000565832 NFKBIAP25963 317 aa6.07□□□□□ -1.44
CHD9-217ENST00000565832 RPL10P27635 214 aaKnown RBP6.07□□□□□ -1.44
CHD9-217ENST00000565832 PIK3R1P27986 724 aa6.07□□□□□ -1.44
CHD9-217ENST00000565832 MSX2P35548 267 aaPredicted RBP6.07□□□□□ -1.44
CHD9-217ENST00000565832 HTR6P50406 440 aa6.07□□□□□ -1.44
CHD9-217ENST00000565832 NEK2P51955 445 aa6.07□□□□□ -1.44
CHD9-217ENST00000565832 MXRA7P84157 204 aa6.07□□□□□ -1.44
CHD9-217ENST00000565832 ILF2Q12905 390 aaKnown RBP6.07□□□□□ -1.44
CHD9-217ENST00000565832 ABRAXAS2Q15018 415 aa6.07□□□□□ -1.44
CHD9-217ENST00000565832 PCBP2Q15366 365 aaKnown RBP eCLIP6.07□□□□□ -1.441e-6■■■■■ 40.7
CHD9-217ENST00000565832 PTCHD3Q3KNS1 767 aa6.07□□□□□ -1.44
CHD9-217ENST00000565832 TTLL9Q3SXZ7 439 aa6.07□□□□□ -1.44
CHD9-217ENST00000565832 PRAMEF9Q5VWM5 478 aa6.07□□□□□ -1.44
CHD9-217ENST00000565832 FAM46CQ5VWP2 391 aa6.07□□□□□ -1.44
CHD9-217ENST00000565832 METTL21CQ5VZV1 264 aa6.07□□□□□ -1.44
CHD9-217ENST00000565832 NEK5Q6P3R8 708 aa6.07□□□□□ -1.44
CHD9-217ENST00000565832 PAOXQ6QHF9 649 aa6.07□□□□□ -1.44
CHD9-217ENST00000565832 Q6ZS52 159 aa6.07□□□□□ -1.44
CHD9-217ENST00000565832 Q6ZSR9 355 aa6.07□□□□□ -1.44
CHD9-217ENST00000565832 GPRIN3Q6ZVF9 776 aa6.07□□□□□ -1.44
CHD9-217ENST00000565832 SNX32Q86XE0 403 aa6.07□□□□□ -1.44
CHD9-217ENST00000565832 PHYKPLQ8IUZ5 450 aa6.07□□□□□ -1.44
CHD9-217ENST00000565832 ABCA7Q8IZY2 2146 aa6.07□□□□□ -1.44
CHD9-217ENST00000565832 RNF175Q8N4F7 328 aa6.07□□□□□ -1.44
CHD9-217ENST00000565832 C2orf73Q8N5S3 287 aaPredicted RBP6.07□□□□□ -1.44
CHD9-217ENST00000565832 PDPRQ8NCN5 879 aa6.07□□□□□ -1.44
CHD9-217ENST00000565832 PHC3Q8NDX5 983 aa6.07□□□□□ -1.44
CHD9-217ENST00000565832 FAM13CQ8NE31 585 aa6.07□□□□□ -1.44
CHD9-217ENST00000565832 METTL6Q8TCB7 284 aa6.07□□□□□ -1.44
CHD9-217ENST00000565832 WDR60Q8WVS4 1066 aa6.07□□□□□ -1.44
CHD9-217ENST00000565832 TUBGCP3Q96CW5 907 aa6.07□□□□□ -1.44
CHD9-217ENST00000565832 HIC2Q96JB3 615 aa6.07□□□□□ -1.44
CHD9-217ENST00000565832 TEX37Q96LM6 180 aa6.07□□□□□ -1.44
CHD9-217ENST00000565832 GABRG3Q99928 467 aa6.07□□□□□ -1.44
CHD9-217ENST00000565832 THTPAQ9BU02 230 aa6.07□□□□□ -1.44
CHD9-217ENST00000565832 C1QTNF3Q9BXJ4 246 aa6.07□□□□□ -1.44
CHD9-217ENST00000565832 SLC12A9Q9BXP2 914 aa6.07□□□□□ -1.44
CHD9-217ENST00000565832 ZNF385DQ9H6B1 395 aa6.07□□□□□ -1.44
CHD9-217ENST00000565832 PARVBQ9HBI1 364 aa6.07□□□□□ -1.44
CHD9-217ENST00000565832 TRIM39Q9HCM9 518 aa6.07□□□□□ -1.44
CHD9-217ENST00000565832 MRPL40Q9NQ50 206 aaKnown RBP6.07□□□□□ -1.44
CHD9-217ENST00000565832 INTS7Q9NVH2 962 aaKnown RBP6.07□□□□□ -1.44
CHD9-217ENST00000565832 WWOXQ9NZC7 414 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms