RNA–Protein interactions for RNA: ENST00000565003.5

CMTM3-209, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-209ENST00000565003 PPARGP37231 505 aaPredicted RBP9.68□□□□□ -0.86
CMTM3-209ENST00000565003 CASRP41180 1078 aa9.68□□□□□ -0.86
CMTM3-209ENST00000565003 TTPAP49638 278 aa9.68□□□□□ -0.86
CMTM3-209ENST00000565003 VPS41P49754 854 aa9.68□□□□□ -0.86
CMTM3-209ENST00000565003 TERF1P54274 439 aa9.68□□□□□ -0.86
CMTM3-209ENST00000565003 CHAF1BQ13112 559 aa9.68□□□□□ -0.86
CMTM3-209ENST00000565003 GRB7Q14451 532 aa9.68□□□□□ -0.86
CMTM3-209ENST00000565003 KCNJ11Q14654 390 aa9.68□□□□□ -0.86
CMTM3-209ENST00000565003 SLC5A12Q1EHB4 618 aa9.68□□□□□ -0.86
CMTM3-209ENST00000565003 TTC27Q6P3X3 843 aa9.68□□□□□ -0.86
CMTM3-209ENST00000565003 LRRC8BQ6P9F7 803 aa9.68□□□□□ -0.86
CMTM3-209ENST00000565003 C4orf22Q6V702 233 aa9.68□□□□□ -0.86
CMTM3-209ENST00000565003 HOOK3Q86VS8 718 aa9.68□□□□□ -0.86
CMTM3-209ENST00000565003 CFAP61Q8NHU2 1237 aa9.68□□□□□ -0.86
CMTM3-209ENST00000565003 ASZ1Q8WWH4 475 aa9.68□□□□□ -0.86
CMTM3-209ENST00000565003 THAP4Q8WY91 577 aa9.68□□□□□ -0.86
CMTM3-209ENST00000565003 MFSD3Q96ES6 412 aa9.68□□□□□ -0.86
CMTM3-209ENST00000565003 TCTN2Q96GX1 697 aa9.68□□□□□ -0.86
CMTM3-209ENST00000565003 KIFC1Q9BW19 673 aa9.68□□□□□ -0.86
CMTM3-209ENST00000565003 TSSK1BQ9BXA7 367 aa9.68□□□□□ -0.86
CMTM3-209ENST00000565003 NLNQ9BYT8 704 aa9.68□□□□□ -0.86
CMTM3-209ENST00000565003 SPRTNQ9H040 489 aaPredicted RBP9.68□□□□□ -0.86
CMTM3-209ENST00000565003 ANAPC5Q9UJX4 755 aa9.68□□□□□ -0.86
CMTM3-209ENST00000565003 TCFL5Q9UL49 500 aa9.68□□□□□ -0.86
CMTM3-209ENST00000565003 SNX7Q9UNH6 387 aa9.68□□□□□ -0.86
CMTM3-209ENST00000565003 KLHL20Q9Y2M5 609 aa9.68□□□□□ -0.86
CMTM3-209ENST00000565003 PPP2R2CQ9Y2T4 447 aa9.68□□□□□ -0.86
CMTM3-209ENST00000565003 NBASA2RRP1 2371 aa9.68□□□□□ -0.86
CMTM3-209ENST00000565003 PCSK5Q92824 1860 aa9.68□□□□□ -0.86
CMTM3-209ENST00000565003 SPENQ96T58 3664 aaKnown RBP9.68□□□□□ -0.86
CMTM3-209ENST00000565003 MED13Q9UHV7 2174 aa9.67□□□□□ -0.86
CMTM3-209ENST00000565003 KRT87PA6NCN2 255 aa9.67□□□□□ -0.86
CMTM3-209ENST00000565003 ARGFXA6NJG6 315 aa9.67□□□□□ -0.86
CMTM3-209ENST00000565003 ISM1B1AKI9 464 aa9.67□□□□□ -0.86
CMTM3-209ENST00000565003 GOLGA8KD6RF30 607 aa9.67□□□□□ -0.86
CMTM3-209ENST00000565003 GOLGA8TH3BQL2 631 aa9.67□□□□□ -0.86
CMTM3-209ENST00000565003 AVILO75366 819 aa9.67□□□□□ -0.86
CMTM3-209ENST00000565003 OR2B3O76000 313 aa9.67□□□□□ -0.86
CMTM3-209ENST00000565003 VAPBO95292 243 aa9.67□□□□□ -0.86
CMTM3-209ENST00000565003 APOA4P06727 396 aa9.67□□□□□ -0.86
CMTM3-209ENST00000565003 TPSB2P20231 275 aa9.67□□□□□ -0.86
CMTM3-209ENST00000565003 CD9P21926 228 aa9.67□□□□□ -0.86
CMTM3-209ENST00000565003 RPS3P23396 243 aaKnown RBP eCLIP9.67□□□□□ -0.86
CMTM3-209ENST00000565003 PTGIRP43119 386 aa9.67□□□□□ -0.86
CMTM3-209ENST00000565003 NPY2RP49146 381 aa9.67□□□□□ -0.86
CMTM3-209ENST00000565003 RAB28P51157 221 aa9.67□□□□□ -0.86
CMTM3-209ENST00000565003 CDK16Q00536 496 aa9.67□□□□□ -0.86
CMTM3-209ENST00000565003 KIR2DS3Q14952 304 aa9.67□□□□□ -0.86
CMTM3-209ENST00000565003 NCF4Q15080 339 aa9.67□□□□□ -0.86
CMTM3-209ENST00000565003 TPSAB1Q15661 275 aa9.67□□□□□ -0.86
CMTM3-209ENST00000565003 IGFBP7Q16270 282 aa9.67□□□□□ -0.86
CMTM3-209ENST00000565003 KYNUQ16719 465 aa9.67□□□□□ -0.86
CMTM3-209ENST00000565003 CTSL3PQ5NE16 218 aa9.67□□□□□ -0.86
CMTM3-209ENST00000565003 ANKRD22Q5VYY1 191 aa9.67□□□□□ -0.86
CMTM3-209ENST00000565003 PTRHD1Q6GMV3 140 aaKnown RBP9.67□□□□□ -0.86
CMTM3-209ENST00000565003 UNC5DQ6UXZ4 953 aa9.67□□□□□ -0.86
CMTM3-209ENST00000565003 ASB18Q6ZVZ8 466 aa9.67□□□□□ -0.86
CMTM3-209ENST00000565003 TAX1BP1Q86VP1 789 aa9.67□□□□□ -0.86
CMTM3-209ENST00000565003 DCUN1D3Q8IWE4 304 aa9.67□□□□□ -0.86
CMTM3-209ENST00000565003 GPR135Q8IZ08 494 aa9.67□□□□□ -0.86
CMTM3-209ENST00000565003 MPP5Q8N3R9 675 aa9.67□□□□□ -0.86
CMTM3-209ENST00000565003 C2orf73Q8N5S3 287 aaPredicted RBP9.67□□□□□ -0.86
CMTM3-209ENST00000565003 N4BP2L2Q92802 583 aaPredicted RBP9.67□□□□□ -0.86
CMTM3-209ENST00000565003 BIRC8Q96P09 236 aa9.67□□□□□ -0.86
CMTM3-209ENST00000565003 TRIM56Q9BRZ2 755 aaKnown RBP9.67□□□□□ -0.86
CMTM3-209ENST00000565003 SLC7A5P2Q9GIP4 190 aa9.67□□□□□ -0.86
CMTM3-209ENST00000565003 CHRNA10Q9GZZ6 450 aa9.67□□□□□ -0.86
CMTM3-209ENST00000565003 MRM3Q9HC36 420 aaKnown RBP9.67□□□□□ -0.86
CMTM3-209ENST00000565003 BFARQ9NZS9 450 aa9.67□□□□□ -0.86
CMTM3-209ENST00000565003 GNPTGQ9UJJ9 305 aa9.67□□□□□ -0.86
CMTM3-209ENST00000565003 RUVBL2Q9Y230 463 aaKnown RBP9.67□□□□□ -0.86
CMTM3-209ENST00000565003 NFS1Q9Y697 457 aa9.67□□□□□ -0.86
CMTM3-209ENST00000565003 SETXQ7Z333 2677 aaKnown RBP9.66□□□□□ -0.86
CMTM3-209ENST00000565003 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.66□□□□□ -0.86
CMTM3-209ENST00000565003 AP3B1O00203 1094 aa9.66□□□□□ -0.86
CMTM3-209ENST00000565003 ZSCAN9O15535 394 aaPredicted RBP9.66□□□□□ -0.86
CMTM3-209ENST00000565003 KDM1AO60341 852 aa9.66□□□□□ -0.86
CMTM3-209ENST00000565003 NDUFS3O75489 264 aa9.66□□□□□ -0.86
CMTM3-209ENST00000565003 TMEM63AO94886 807 aa9.66□□□□□ -0.86
CMTM3-209ENST00000565003 CBSLP0DN79 551 aa9.66□□□□□ -0.86
CMTM3-209ENST00000565003 MAGP20916 626 aa9.66□□□□□ -0.86
CMTM3-209ENST00000565003 CBSP35520 551 aa9.66□□□□□ -0.86
CMTM3-209ENST00000565003 MAGEA6P43360 314 aa9.66□□□□□ -0.86
CMTM3-209ENST00000565003 BDKRB1P46663 353 aa9.66□□□□□ -0.86
CMTM3-209ENST00000565003 EIF3BP55884 814 aaKnown RBP9.66□□□□□ -0.86
CMTM3-209ENST00000565003 KLRB1Q12918 225 aa9.66□□□□□ -0.86
CMTM3-209ENST00000565003 GPS1Q13098 491 aa9.66□□□□□ -0.86
CMTM3-209ENST00000565003 TMED2Q15363 201 aa9.66□□□□□ -0.86
CMTM3-209ENST00000565003 TYSND1Q2T9J0 566 aa9.66□□□□□ -0.86
CMTM3-209ENST00000565003 CCSMST1Q4G0I0 132 aa9.66□□□□□ -0.86
CMTM3-209ENST00000565003 C1orf189Q5VU69 101 aa9.66□□□□□ -0.86
CMTM3-209ENST00000565003 RHBDD2Q6NTF9 364 aa9.66□□□□□ -0.86
CMTM3-209ENST00000565003 RASGEF1CQ8N431 466 aa9.66□□□□□ -0.86
CMTM3-209ENST00000565003 DNAJC22Q8N4W6 341 aa9.66□□□□□ -0.86
CMTM3-209ENST00000565003 ZBTB2Q8N680 514 aa9.66□□□□□ -0.86
CMTM3-209ENST00000565003 OTUD6BQ8N6M0 293 aa9.66□□□□□ -0.86
CMTM3-209ENST00000565003 OR2L8Q8NGY9 312 aa9.66□□□□□ -0.86
CMTM3-209ENST00000565003 LPGAT1Q92604 370 aa9.66□□□□□ -0.86
CMTM3-209ENST00000565003 MS4A14Q96JA4 679 aa9.66□□□□□ -0.86
CMTM3-209ENST00000565003 GBP5Q96PP8 586 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms