RNA–Protein interactions for RNA: ENST00000564557.1

CNOT1-206, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-206ENST00000564557 FBXO5Q9UKT4 447 aa13.24□□□□□ -0.29
CNOT1-206ENST00000564557 PLAGL1Q9UM63 463 aa13.24□□□□□ -0.29
CNOT1-206ENST00000564557 CDYLQ9Y232 598 aa13.24□□□□□ -0.29
CNOT1-206ENST00000564557 TMEM184BQ9Y519 407 aaPredicted RBP13.24□□□□□ -0.29
CNOT1-206ENST00000564557 COMMD10Q9Y6G5 202 aa13.24□□□□□ -0.29
CNOT1-206ENST00000564557 SDK2Q58EX2 2172 aa13.23□□□□□ -0.29
CNOT1-206ENST00000564557 FAM187AA6NFU0 413 aa13.23□□□□□ -0.29
CNOT1-206ENST00000564557 CHRM5P08912 532 aaPredicted RBP13.23□□□□□ -0.29
CNOT1-206ENST00000564557 IVDP26440 423 aa13.23□□□□□ -0.29
CNOT1-206ENST00000564557 SLC1A2P43004 574 aa13.23□□□□□ -0.29
CNOT1-206ENST00000564557 ABHD18Q0P651 414 aa13.23□□□□□ -0.29
CNOT1-206ENST00000564557 KIR2DS3Q14952 304 aa13.23□□□□□ -0.29
CNOT1-206ENST00000564557 HP1BP3Q5SSJ5 553 aaPredicted RBP13.23□□□□□ -0.29
CNOT1-206ENST00000564557 UGT3A1Q6NUS8 523 aa13.23□□□□□ -0.29
CNOT1-206ENST00000564557 HIBCHQ6NVY1 386 aaPredicted RBP13.23□□□□□ -0.29
CNOT1-206ENST00000564557 CNSTQ6PJW8 725 aa13.23□□□□□ -0.29
CNOT1-206ENST00000564557 SPESP1Q6UW49 350 aa13.23□□□□□ -0.29
CNOT1-206ENST00000564557 TMEM126BQ8IUX1 230 aa13.23□□□□□ -0.29
CNOT1-206ENST00000564557 LRRC39Q96DD0 335 aa13.23□□□□□ -0.29
CNOT1-206ENST00000564557 PPM1MQ96MI6 270 aa13.23□□□□□ -0.29
CNOT1-206ENST00000564557 ZC3H7BQ9UGR2 993 aaKnown RBP13.23□□□□□ -0.29
CNOT1-206ENST00000564557 SERTAD3Q9UJW9 196 aa13.23□□□□□ -0.29
CNOT1-206ENST00000564557 CHMP2BQ9UQN3 213 aa13.23□□□□□ -0.29
CNOT1-206ENST00000564557 BTRCQ9Y297 605 aa13.23□□□□□ -0.29
CNOT1-206ENST00000564557 SNX24Q9Y343 169 aa13.23□□□□□ -0.29
CNOT1-206ENST00000564557 VPS26AO75436 327 aa13.22□□□□□ -0.29
CNOT1-206ENST00000564557 BANF1O75531 89 aa13.22□□□□□ -0.29
CNOT1-206ENST00000564557 SEC31AO94979 1220 aaKnown RBP13.22□□□□□ -0.29
CNOT1-206ENST00000564557 ERVK-10P10266 1014 aa13.22□□□□□ -0.29
CNOT1-206ENST00000564557 ST6GAL1P15907 406 aa13.22□□□□□ -0.29
CNOT1-206ENST00000564557 UGT2B7P16662 529 aa13.22□□□□□ -0.29
CNOT1-206ENST00000564557 CD9P21926 228 aa13.22□□□□□ -0.29
CNOT1-206ENST00000564557 ELK3P41970 407 aa13.22□□□□□ -0.29
CNOT1-206ENST00000564557 CARSP49589 748 aaKnown RBP13.22□□□□□ -0.29
CNOT1-206ENST00000564557 CKAP4Q07065 602 aaKnown RBP13.22□□□□□ -0.29
CNOT1-206ENST00000564557 MAP7Q14244 749 aa13.22□□□□□ -0.29
CNOT1-206ENST00000564557 GPR19Q15760 415 aa13.22□□□□□ -0.29
CNOT1-206ENST00000564557 KYNUQ16719 465 aa13.22□□□□□ -0.29
CNOT1-206ENST00000564557 ZNF789Q5FWF6 425 aa13.22□□□□□ -0.29
CNOT1-206ENST00000564557 GALNT6Q8NCL4 622 aa13.22□□□□□ -0.29
CNOT1-206ENST00000564557 TRIM44Q96DX7 344 aaPredicted RBP13.22□□□□□ -0.29
CNOT1-206ENST00000564557 RNF31Q96EP0 1072 aa13.22□□□□□ -0.29
CNOT1-206ENST00000564557 TRAPPC9Q96Q05 1148 aa13.22□□□□□ -0.29
CNOT1-206ENST00000564557 NRTNQ99748 197 aa13.22□□□□□ -0.29
CNOT1-206ENST00000564557 ARHGAP9Q9BRR9 750 aa13.22□□□□□ -0.29
CNOT1-206ENST00000564557 KLHL25Q9H0H3 589 aa13.22□□□□□ -0.29
CNOT1-206ENST00000564557 LATS2Q9NRM7 1088 aa13.22□□□□□ -0.29
CNOT1-206ENST00000564557 FAM114A2Q9NRY5 505 aa13.22□□□□□ -0.29
CNOT1-206ENST00000564557 INTS7Q9NVH2 962 aaKnown RBP13.22□□□□□ -0.29
CNOT1-206ENST00000564557 IRAK4Q9NWZ3 460 aa13.22□□□□□ -0.29
CNOT1-206ENST00000564557 CIDEBQ9UHD4 219 aa13.22□□□□□ -0.29
CNOT1-206ENST00000564557 PADI1Q9ULC6 663 aa13.22□□□□□ -0.29
CNOT1-206ENST00000564557 UTP11Q9Y3A2 253 aaKnown RBP13.22□□□□□ -0.29
CNOT1-206ENST00000564557 BPTFQ12830 3046 aa13.22□□□□□ -0.29
CNOT1-206ENST00000564557 PTPRQQ9UMZ3 2332 aa13.22□□□□□ -0.29
CNOT1-206ENST00000564557 CELSR3Q9NYQ7 3312 aa13.21□□□□□ -0.29
CNOT1-206ENST00000564557 A0A0J9YY10 115 aa13.21□□□□□ -0.29
CNOT1-206ENST00000564557 ZNF891A8MT65 544 aaPredicted RBP13.21□□□□□ -0.29
CNOT1-206ENST00000564557 TMEM150CB9EJG8 249 aa13.21□□□□□ -0.29
CNOT1-206ENST00000564557 ERVH48-1M5A8F1 160 aa13.21□□□□□ -0.29
CNOT1-206ENST00000564557 RASGRF2O14827 1237 aa13.21□□□□□ -0.29
CNOT1-206ENST00000564557 FANCGO15287 622 aa13.21□□□□□ -0.29
CNOT1-206ENST00000564557 CPNE3O75131 537 aaKnown RBP13.21□□□□□ -0.29
CNOT1-206ENST00000564557 SCRG1O75711 98 aa13.21□□□□□ -0.29
CNOT1-206ENST00000564557 HAUS5O94927 633 aa13.21□□□□□ -0.29
CNOT1-206ENST00000564557 C1orf105O95561 183 aa13.21□□□□□ -0.29
CNOT1-206ENST00000564557 DLGAP3O95886 979 aa13.21□□□□□ -0.29
CNOT1-206ENST00000564557 CATP04040 527 aaKnown RBP13.21□□□□□ -0.29
CNOT1-206ENST00000564557 KLK3P07288 261 aaPredicted RBP13.21□□□□□ -0.29
CNOT1-206ENST00000564557 LIFP15018 202 aa13.21□□□□□ -0.29
CNOT1-206ENST00000564557 PVRP15151 417 aa13.21□□□□□ -0.29
CNOT1-206ENST00000564557 CYP2A7P20853 494 aa13.21□□□□□ -0.29
CNOT1-206ENST00000564557 ATP5DP30049 168 aa13.21□□□□□ -0.29
CNOT1-206ENST00000564557 PKLRP30613 574 aa13.21□□□□□ -0.29
CNOT1-206ENST00000564557 BDKRB1P46663 353 aa13.21□□□□□ -0.29
CNOT1-206ENST00000564557 MPP1Q00013 466 aa13.21□□□□□ -0.29
CNOT1-206ENST00000564557 MC1RQ01726 317 aa13.21□□□□□ -0.29
CNOT1-206ENST00000564557 C2orf54Q08AI8 447 aa13.21□□□□□ -0.29
CNOT1-206ENST00000564557 PDIA2Q13087 525 aaKnown RBP13.21□□□□□ -0.29
CNOT1-206ENST00000564557 SRSF6Q13247 344 aaKnown RBP13.21□□□□□ -0.29
CNOT1-206ENST00000564557 SF1Q15637 639 aaKnown RBP13.21□□□□□ -0.29
CNOT1-206ENST00000564557 SLC5A12Q1EHB4 618 aa13.21□□□□□ -0.29
CNOT1-206ENST00000564557 KLHL38Q2WGJ6 581 aa13.21□□□□□ -0.29
CNOT1-206ENST00000564557 MSS51Q4VC12 460 aa13.21□□□□□ -0.29
CNOT1-206ENST00000564557 KIAA1614Q5VZ46 1190 aa13.21□□□□□ -0.29
CNOT1-206ENST00000564557 PWWP2BQ6NUJ5 590 aa13.21□□□□□ -0.29
CNOT1-206ENST00000564557 TIPARPQ7Z3E1 657 aaKnown RBP13.21□□□□□ -0.29
CNOT1-206ENST00000564557 TAX1BP1Q86VP1 789 aa13.21□□□□□ -0.29
CNOT1-206ENST00000564557 GPR135Q8IZ08 494 aa13.21□□□□□ -0.29
CNOT1-206ENST00000564557 UNC5BQ8IZJ1 945 aa13.21□□□□□ -0.29
CNOT1-206ENST00000564557 AGGF1Q8N302 714 aaeCLIP13.21□□□□□ -0.29
CNOT1-206ENST00000564557 C2orf73Q8N5S3 287 aaPredicted RBP13.21□□□□□ -0.29
CNOT1-206ENST00000564557 OR2L8Q8NGY9 312 aa13.21□□□□□ -0.29
CNOT1-206ENST00000564557 SNRNP27Q8WVK2 155 aaKnown RBP13.21□□□□□ -0.29
CNOT1-206ENST00000564557 ZNF592Q92610 1267 aa13.21□□□□□ -0.29
CNOT1-206ENST00000564557 KCNJ9Q92806 393 aa13.21□□□□□ -0.29
CNOT1-206ENST00000564557 INPP5DQ92835 1189 aa13.21□□□□□ -0.29
CNOT1-206ENST00000564557 CLIP3Q96DZ5 547 aa13.21□□□□□ -0.29
CNOT1-206ENST00000564557 CERS2Q96G23 380 aa13.21□□□□□ -0.29
CNOT1-206ENST00000564557 TCTN2Q96GX1 697 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms