RNA–Protein interactions for RNA: ENST00000564060.5

CMTM3-207, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2 BASIC

Gene CMTM3, Length 824 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-207ENST00000564060 ZNF501Q96CX3 271 aaPredicted RBP19.21■□□□□ 0.67
CMTM3-207ENST00000564060 PPM1MQ96MI6 270 aa19.21■□□□□ 0.67
CMTM3-207ENST00000564060 TRAPPC9Q96Q05 1148 aa19.21■□□□□ 0.67
CMTM3-207ENST00000564060 KLHL42Q9P2K6 505 aa19.21■□□□□ 0.67
CMTM3-207ENST00000564060 PADI1Q9ULC6 663 aa19.21■□□□□ 0.67
CMTM3-207ENST00000564060 IGSF10Q6WRI0 2623 aa19.2■□□□□ 0.66
CMTM3-207ENST00000564060 LOC101059948A0A1B0GTJ6 334 aa19.2■□□□□ 0.66
CMTM3-207ENST00000564060 EFCAB8A8MWE9 144 aa19.2■□□□□ 0.66
CMTM3-207ENST00000564060 ISM1B1AKI9 464 aa19.2■□□□□ 0.66
CMTM3-207ENST00000564060 RASGRF2O14827 1237 aa19.2■□□□□ 0.66
CMTM3-207ENST00000564060 SCRG1O75711 98 aa19.2■□□□□ 0.66
CMTM3-207ENST00000564060 SEC31AO94979 1220 aaKnown RBP19.2■□□□□ 0.66
CMTM3-207ENST00000564060 CD9P21926 228 aa19.2■□□□□ 0.66
CMTM3-207ENST00000564060 CTBP1Q13363 440 aa19.2■□□□□ 0.66
CMTM3-207ENST00000564060 GBX1Q14549 363 aa19.2■□□□□ 0.66
CMTM3-207ENST00000564060 HIF1AQ16665 826 aa19.2■□□□□ 0.66
CMTM3-207ENST00000564060 BBS9Q3SYG4 887 aa19.2■□□□□ 0.66
CMTM3-207ENST00000564060 HSP90AA5PQ58FG0 334 aa19.2■□□□□ 0.66
CMTM3-207ENST00000564060 PWWP2BQ6NUJ5 590 aa19.2■□□□□ 0.66
CMTM3-207ENST00000564060 HIBCHQ6NVY1 386 aaPredicted RBP19.2■□□□□ 0.66
CMTM3-207ENST00000564060 FBXO38Q6PIJ6 1188 aa19.2■□□□□ 0.66
CMTM3-207ENST00000564060 C19orf47Q8N9M1 422 aaKnown RBP19.2■□□□□ 0.66
CMTM3-207ENST00000564060 BBOF1Q8ND07 529 aa19.2■□□□□ 0.66
CMTM3-207ENST00000564060 SLC39A7Q92504 469 aa19.2■□□□□ 0.66
CMTM3-207ENST00000564060 TTC9Q92623 222 aa19.2■□□□□ 0.66
CMTM3-207ENST00000564060 N4BP2L2Q92802 583 aaPredicted RBP19.2■□□□□ 0.66
CMTM3-207ENST00000564060 TCTN2Q96GX1 697 aa19.2■□□□□ 0.66
CMTM3-207ENST00000564060 CATSPER2Q96P56 530 aa19.2■□□□□ 0.66
CMTM3-207ENST00000564060 OR2A14Q96R47 310 aa19.2■□□□□ 0.66
CMTM3-207ENST00000564060 KRT12Q99456 494 aa19.2■□□□□ 0.66
CMTM3-207ENST00000564060 TWSG1Q9GZX9 223 aa19.2■□□□□ 0.66
CMTM3-207ENST00000564060 CHRNA10Q9GZZ6 450 aa19.2■□□□□ 0.66
CMTM3-207ENST00000564060 FBXO6Q9NRD1 293 aaPredicted RBP19.2■□□□□ 0.66
CMTM3-207ENST00000564060 KCND3Q9UK17 655 aa19.2■□□□□ 0.66
CMTM3-207ENST00000564060 FBXO5Q9UKT4 447 aa19.2■□□□□ 0.66
CMTM3-207ENST00000564060 PLAGL1Q9UM63 463 aa19.2■□□□□ 0.66
CMTM3-207ENST00000564060 MGAQ8IWI9 3026 aa19.19■□□□□ 0.66
CMTM3-207ENST00000564060 FANCGO15287 622 aa19.19■□□□□ 0.66
CMTM3-207ENST00000564060 FKBP9O95302 570 aa19.19■□□□□ 0.66
CMTM3-207ENST00000564060 C1orf105O95561 183 aa19.19■□□□□ 0.66
CMTM3-207ENST00000564060 TPBGLP0DKB5 382 aa19.19■□□□□ 0.66
CMTM3-207ENST00000564060 DLSTP36957 453 aa19.19■□□□□ 0.66
CMTM3-207ENST00000564060 ARL4CP56559 192 aa19.19■□□□□ 0.66
CMTM3-207ENST00000564060 CNSTQ6PJW8 725 aa19.19■□□□□ 0.66
CMTM3-207ENST00000564060 NEK10Q6ZWH5 1172 aa19.19■□□□□ 0.66
CMTM3-207ENST00000564060 MAATS1Q7Z4T9 603 aa19.19■□□□□ 0.66
CMTM3-207ENST00000564060 OR2L8Q8NGY9 312 aa19.19■□□□□ 0.66
CMTM3-207ENST00000564060 BBC3Q96PG8 261 aaPredicted RBP19.19■□□□□ 0.66
CMTM3-207ENST00000564060 NRTNQ99748 197 aa19.19■□□□□ 0.66
CMTM3-207ENST00000564060 TRIM51Q9BSJ1 452 aa19.19■□□□□ 0.66
CMTM3-207ENST00000564060 MENTQ9BUN1 341 aa19.19■□□□□ 0.66
CMTM3-207ENST00000564060 SLC12A9Q9BXP2 914 aa19.19■□□□□ 0.66
CMTM3-207ENST00000564060 LHX9Q9NQ69 397 aa19.19■□□□□ 0.66
CMTM3-207ENST00000564060 INTS7Q9NVH2 962 aaKnown RBP19.19■□□□□ 0.66
CMTM3-207ENST00000564060 SERTAD3Q9UJW9 196 aa19.19■□□□□ 0.66
CMTM3-207ENST00000564060 PCDHB3Q9Y5E6 796 aa19.19■□□□□ 0.66
CMTM3-207ENST00000564060 SPTBP11277 2137 aa19.19■□□□□ 0.66
CMTM3-207ENST00000564060 TMEM150CB9EJG8 249 aa19.18■□□□□ 0.66
CMTM3-207ENST00000564060 TIAF1O95411 115 aa19.18■□□□□ 0.66
CMTM3-207ENST00000564060 ENO3P13929 434 aaPredicted RBP19.18■□□□□ 0.66
CMTM3-207ENST00000564060 WT1P19544 449 aaPredicted RBP19.18■□□□□ 0.66
CMTM3-207ENST00000564060 ITGA8P53708 1063 aa19.18■□□□□ 0.66
CMTM3-207ENST00000564060 CRTC2Q53ET0 693 aaPredicted RBP19.18■□□□□ 0.66
CMTM3-207ENST00000564060 ZNF789Q5FWF6 425 aa19.18■□□□□ 0.66
CMTM3-207ENST00000564060 UGT3A1Q6NUS8 523 aa19.18■□□□□ 0.66
CMTM3-207ENST00000564060 KIAA0408Q6ZU52 694 aa19.18■□□□□ 0.66
CMTM3-207ENST00000564060 GPR135Q8IZ08 494 aa19.18■□□□□ 0.66
CMTM3-207ENST00000564060 SPATA4Q8NEY3 305 aa19.18■□□□□ 0.66
CMTM3-207ENST00000564060 STARD8Q92502 1023 aa19.18■□□□□ 0.66
CMTM3-207ENST00000564060 FAM136AQ96C01 138 aa19.18■□□□□ 0.66
CMTM3-207ENST00000564060 CERS2Q96G23 380 aa19.18■□□□□ 0.66
CMTM3-207ENST00000564060 ARHGAP9Q9BRR9 750 aa19.18■□□□□ 0.66
CMTM3-207ENST00000564060 FAM114A2Q9NRY5 505 aa19.18■□□□□ 0.66
CMTM3-207ENST00000564060 IARS2Q9NSE4 1012 aaKnown RBP19.18■□□□□ 0.66
CMTM3-207ENST00000564060 SPHK1Q9NYA1 384 aa19.18■□□□□ 0.66
CMTM3-207ENST00000564060 SPATA7Q9P0W8 599 aa19.18■□□□□ 0.66
CMTM3-207ENST00000564060 ZC3H7BQ9UGR2 993 aaKnown RBP19.18■□□□□ 0.66
CMTM3-207ENST00000564060 LOC400499M0QZD8 3231 aa19.17■□□□□ 0.66
CMTM3-207ENST00000564060 FAM187AA6NFU0 413 aa19.17■□□□□ 0.66
CMTM3-207ENST00000564060 C21orf140B9A014 251 aa19.17■□□□□ 0.66
CMTM3-207ENST00000564060 EIF3FO00303 357 aaPredicted RBP19.17■□□□□ 0.66
CMTM3-207ENST00000564060 VPS26AO75436 327 aa19.17■□□□□ 0.66
CMTM3-207ENST00000564060 MATN4O95460 622 aa19.17■□□□□ 0.66
CMTM3-207ENST00000564060 CATP04040 527 aaKnown RBP19.17■□□□□ 0.66
CMTM3-207ENST00000564060 KLK3P07288 261 aaPredicted RBP19.17■□□□□ 0.66
CMTM3-207ENST00000564060 HBQ1P09105 142 aa19.17■□□□□ 0.66
CMTM3-207ENST00000564060 PVRP15151 417 aa19.17■□□□□ 0.66
CMTM3-207ENST00000564060 CYP2A7P20853 494 aa19.17■□□□□ 0.66
CMTM3-207ENST00000564060 CLCN7P51798 805 aa19.17■□□□□ 0.66
CMTM3-207ENST00000564060 ITGA1P56199 1179 aa19.17■□□□□ 0.66
CMTM3-207ENST00000564060 GRB7Q14451 532 aa19.17■□□□□ 0.66
CMTM3-207ENST00000564060 KLHL38Q2WGJ6 581 aa19.17■□□□□ 0.66
CMTM3-207ENST00000564060 MSS51Q4VC12 460 aa19.17■□□□□ 0.66
CMTM3-207ENST00000564060 LRRC8EQ6NSJ5 796 aa19.17■□□□□ 0.66
CMTM3-207ENST00000564060 SYT10Q6XYQ8 523 aa19.17■□□□□ 0.66
CMTM3-207ENST00000564060 CNTN4Q8IWV2 1026 aa19.17■□□□□ 0.66
CMTM3-207ENST00000564060 UNC5BQ8IZJ1 945 aa19.17■□□□□ 0.66
CMTM3-207ENST00000564060 C2CD4AQ8NCU7 369 aaPredicted RBP19.17■□□□□ 0.66
CMTM3-207ENST00000564060 FLVCR1-AS1Q8TAF5 88 aa19.17■□□□□ 0.66
CMTM3-207ENST00000564060 HMGCLL1Q8TB92 370 aa19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms