RNA–Protein interactions for RNA: ENST00000563952.1

CMTM4-204, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene CMTM4, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-204ENST00000563952 CNSTQ6PJW8 725 aa29.72■■■□□ 2.35
CMTM4-204ENST00000563952 C2orf73Q8N5S3 287 aaPredicted RBP29.72■■■□□ 2.35
CMTM4-204ENST00000563952 LMNTD1Q8N9Z9 388 aa29.72■■■□□ 2.35
CMTM4-204ENST00000563952 SERBP1Q8NC51 408 aaKnown RBP eCLIP29.72■■■□□ 2.35
CMTM4-204ENST00000563952 IL17FQ96PD4 163 aa29.72■■■□□ 2.35
CMTM4-204ENST00000563952 ARHGAP9Q9BRR9 750 aa29.72■■■□□ 2.35
CMTM4-204ENST00000563952 TRIM51Q9BSJ1 452 aa29.72■■■□□ 2.35
CMTM4-204ENST00000563952 GALPQ9UBC7 116 aa29.72■■■□□ 2.35
CMTM4-204ENST00000563952 PADI1Q9ULC6 663 aa29.72■■■□□ 2.35
CMTM4-204ENST00000563952 MRPS18BQ9Y676 258 aaKnown RBP29.72■■■□□ 2.35
CMTM4-204ENST00000563952 FAM169AQ9Y6X4 670 aa29.72■■■□□ 2.35
CMTM4-204ENST00000563952 CCDC188H7C350 402 aa29.71■■■□□ 2.35
CMTM4-204ENST00000563952 NKX2-8O15522 239 aa29.71■■■□□ 2.35
CMTM4-204ENST00000563952 PRKAR1AP10644 381 aa29.71■■■□□ 2.35
CMTM4-204ENST00000563952 IVDP26440 423 aa29.71■■■□□ 2.35
CMTM4-204ENST00000563952 BDKRB1P46663 353 aa29.71■■■□□ 2.35
CMTM4-204ENST00000563952 TAX1BP1Q86VP1 789 aa29.71■■■□□ 2.35
CMTM4-204ENST00000563952 ZBTB2Q8N680 514 aa29.71■■■□□ 2.35
CMTM4-204ENST00000563952 C19orf47Q8N9M1 422 aaKnown RBP29.71■■■□□ 2.35
CMTM4-204ENST00000563952 FLVCR1-AS1Q8TAF5 88 aa29.71■■■□□ 2.35
CMTM4-204ENST00000563952 CALML6Q8TD86 181 aa29.71■■■□□ 2.35
CMTM4-204ENST00000563952 STARD8Q92502 1023 aa29.71■■■□□ 2.35
CMTM4-204ENST00000563952 FOPNLQ96NB1 174 aa29.71■■■□□ 2.35
CMTM4-204ENST00000563952 LHX9Q9NQ69 397 aa29.71■■■□□ 2.35
CMTM4-204ENST00000563952 SLC39A10Q9ULF5 831 aa29.71■■■□□ 2.35
CMTM4-204ENST00000563952 TTI1O43156 1089 aa29.7■■■□□ 2.35
CMTM4-204ENST00000563952 CPNE3O75131 537 aaKnown RBP29.7■■■□□ 2.35
CMTM4-204ENST00000563952 F8A1P23610 371 aa29.7■■■□□ 2.35
CMTM4-204ENST00000563952 PEBP1P30086 187 aaKnown RBP29.7■■■□□ 2.35
CMTM4-204ENST00000563952 GRB7Q14451 532 aa29.7■■■□□ 2.35
CMTM4-204ENST00000563952 KIR2DS3Q14952 304 aa29.7■■■□□ 2.35
CMTM4-204ENST00000563952 TBR1Q16650 682 aa29.7■■■□□ 2.35
CMTM4-204ENST00000563952 LINC00303Q3SY05 128 aa29.7■■■□□ 2.35
CMTM4-204ENST00000563952 BBS9Q3SYG4 887 aa29.7■■■□□ 2.35
CMTM4-204ENST00000563952 MSS51Q4VC12 460 aa29.7■■■□□ 2.35
CMTM4-204ENST00000563952 HSP90AA5PQ58FG0 334 aa29.7■■■□□ 2.35
CMTM4-204ENST00000563952 PRAMEF17Q5VTA0 474 aa29.7■■■□□ 2.35
CMTM4-204ENST00000563952 CDHR3Q6ZTQ4 885 aa29.7■■■□□ 2.35
CMTM4-204ENST00000563952 OR1L3Q8NH93 324 aa29.7■■■□□ 2.35
CMTM4-204ENST00000563952 MENTQ9BUN1 341 aa29.7■■■□□ 2.35
CMTM4-204ENST00000563952 CCDC68Q9H2F9 335 aa29.7■■■□□ 2.35
CMTM4-204ENST00000563952 SYTL2Q9HCH5 934 aa29.7■■■□□ 2.35
CMTM4-204ENST00000563952 LATS2Q9NRM7 1088 aa29.7■■■□□ 2.35
CMTM4-204ENST00000563952 RNF14Q9UBS8 474 aa29.7■■■□□ 2.35
CMTM4-204ENST00000563952 ATMQ13315 3056 aa29.69■■■□□ 2.34
CMTM4-204ENST00000563952 A0A0J9YY10 115 aa29.69■■■□□ 2.34
CMTM4-204ENST00000563952 KATNA1O75449 491 aa29.69■■■□□ 2.34
CMTM4-204ENST00000563952 CD9P21926 228 aa29.69■■■□□ 2.34
CMTM4-204ENST00000563952 CRYMQ14894 314 aa29.69■■■□□ 2.34
CMTM4-204ENST00000563952 KCNMB4Q86W47 210 aa29.69■■■□□ 2.34
CMTM4-204ENST00000563952 LMNTD2Q8IXW0 634 aa29.69■■■□□ 2.34
CMTM4-204ENST00000563952 LINC01555Q8NAE3 123 aa29.69■■■□□ 2.34
CMTM4-204ENST00000563952 CT55Q8WUE5 264 aa29.69■■■□□ 2.34
CMTM4-204ENST00000563952 EBNA1BP2Q99848 306 aaKnown RBP29.69■■■□□ 2.34
CMTM4-204ENST00000563952 FAM167BQ9BTA0 163 aa29.69■■■□□ 2.34
CMTM4-204ENST00000563952 TRIM31Q9BZY9 425 aa29.69■■■□□ 2.34
CMTM4-204ENST00000563952 IARS2Q9NSE4 1012 aaKnown RBP29.69■■■□□ 2.34
CMTM4-204ENST00000563952 FBXO5Q9UKT4 447 aa29.69■■■□□ 2.34
CMTM4-204ENST00000563952 RASGRF2O14827 1237 aa29.68■■■□□ 2.34
CMTM4-204ENST00000563952 C1orf105O95561 183 aa29.68■■■□□ 2.34
CMTM4-204ENST00000563952 MPP1Q00013 466 aa29.68■■■□□ 2.34
CMTM4-204ENST00000563952 MORF4L2Q15014 288 aa29.68■■■□□ 2.34
CMTM4-204ENST00000563952 SLC5A12Q1EHB4 618 aa29.68■■■□□ 2.34
CMTM4-204ENST00000563952 C16orf46Q6P387 395 aa29.68■■■□□ 2.34
CMTM4-204ENST00000563952 FAM20CQ8IXL6 584 aa29.68■■■□□ 2.34
CMTM4-204ENST00000563952 OR2L8Q8NGY9 312 aa29.68■■■□□ 2.34
CMTM4-204ENST00000563952 N4BP2L2Q92802 583 aaPredicted RBP29.68■■■□□ 2.34
CMTM4-204ENST00000563952 RAD51AP1Q96B01 352 aa29.68■■■□□ 2.34
CMTM4-204ENST00000563952 TCTN2Q96GX1 697 aa29.68■■■□□ 2.34
CMTM4-204ENST00000563952 SEMA4CQ9C0C4 833 aa29.68■■■□□ 2.34
CMTM4-204ENST00000563952 FAM60AQ9NP50 221 aa29.68■■■□□ 2.34
CMTM4-204ENST00000563952 SERTAD3Q9UJW9 196 aa29.68■■■□□ 2.34
CMTM4-204ENST00000563952 MRFAP1Q9Y605 127 aa29.68■■■□□ 2.34
CMTM4-204ENST00000563952 KRT87PA6NCN2 255 aa29.67■■■□□ 2.34
CMTM4-204ENST00000563952 C1QL1O75973 258 aa29.67■■■□□ 2.34
CMTM4-204ENST00000563952 TCN2P20062 427 aa29.67■■■□□ 2.34
CMTM4-204ENST00000563952 CYP2A7P20853 494 aa29.67■■■□□ 2.34
CMTM4-204ENST00000563952 ATP5DP30049 168 aa29.67■■■□□ 2.34
CMTM4-204ENST00000563952 CDC20Q12834 499 aa29.67■■■□□ 2.34
CMTM4-204ENST00000563952 GBX1Q14549 363 aa29.67■■■□□ 2.34
CMTM4-204ENST00000563952 ZIC1Q15915 447 aa29.67■■■□□ 2.34
CMTM4-204ENST00000563952 CCSMST1Q4G0I0 132 aa29.67■■■□□ 2.34
CMTM4-204ENST00000563952 ACSBG2Q5FVE4 666 aa29.67■■■□□ 2.34
CMTM4-204ENST00000563952 HP1BP3Q5SSJ5 553 aaPredicted RBP29.67■■■□□ 2.34
CMTM4-204ENST00000563952 FAM199XQ6PEV8 388 aaPredicted RBP29.67■■■□□ 2.34
CMTM4-204ENST00000563952 PWWP2AQ96N64 755 aa29.67■■■□□ 2.34
CMTM4-204ENST00000563952 KRT12Q99456 494 aa29.67■■■□□ 2.34
CMTM4-204ENST00000563952 TWSG1Q9GZX9 223 aa29.67■■■□□ 2.34
CMTM4-204ENST00000563952 AKIRIN1Q9H9L7 192 aaPredicted RBP29.67■■■□□ 2.34
CMTM4-204ENST00000563952 TTC4O95801 387 aa29.66■■■□□ 2.34
CMTM4-204ENST00000563952 MSL3P1P0C860 447 aa29.66■■■□□ 2.34
CMTM4-204ENST00000563952 ERVK-10P10266 1014 aa29.66■■■□□ 2.34
CMTM4-204ENST00000563952 CCNFP41002 786 aa29.66■■■□□ 2.34
CMTM4-204ENST00000563952 CLCN7P51798 805 aa29.66■■■□□ 2.34
CMTM4-204ENST00000563952 ITGA8P53708 1063 aa29.66■■■□□ 2.34
CMTM4-204ENST00000563952 MC1RQ01726 317 aa29.66■■■□□ 2.34
CMTM4-204ENST00000563952 DNASE1L3Q13609 305 aa29.66■■■□□ 2.34
CMTM4-204ENST00000563952 DEFB110Q30KQ9 67 aa29.66■■■□□ 2.34
CMTM4-204ENST00000563952 ZNF549Q6P9A3 640 aa29.66■■■□□ 2.34
CMTM4-204ENST00000563952 IGDCC3Q8IVU1 814 aa29.66■■■□□ 2.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms