RNA–Protein interactions for RNA: ENST00000563854.1

NME3-205, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 5

Gene NME3, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-205ENST00000563854 ZIC1Q15915 447 aa17.07■□□□□ 0.32
NME3-205ENST00000563854 C1orf189Q5VU69 101 aa17.07■□□□□ 0.32
NME3-205ENST00000563854 FAM198BQ6UWH4 519 aa17.07■□□□□ 0.32
NME3-205ENST00000563854 ASB18Q6ZVZ8 466 aa17.07■□□□□ 0.32
NME3-205ENST00000563854 THAP4Q8WY91 577 aa17.07■□□□□ 0.32
NME3-205ENST00000563854 TCTN2Q96GX1 697 aa17.07■□□□□ 0.32
NME3-205ENST00000563854 IL17FQ96PD4 163 aa17.07■□□□□ 0.32
NME3-205ENST00000563854 CARD6Q9BX69 1037 aa17.07■□□□□ 0.32
NME3-205ENST00000563854 ACSS2Q9NR19 701 aa17.07■□□□□ 0.32
NME3-205ENST00000563854 GNPTGQ9UJJ9 305 aa17.07■□□□□ 0.32
NME3-205ENST00000563854 CDYLQ9Y232 598 aa17.07■□□□□ 0.32
NME3-205ENST00000563854 PPP2R2CQ9Y2T4 447 aa17.07■□□□□ 0.32
NME3-205ENST00000563854 C9J4A7 227 aa17.06■□□□□ 0.32
NME3-205ENST00000563854 GOLGA8KD6RF30 607 aa17.06■□□□□ 0.32
NME3-205ENST00000563854 GOLGA8TH3BQL2 631 aa17.06■□□□□ 0.32
NME3-205ENST00000563854 AP3B1O00203 1094 aa17.06■□□□□ 0.32
NME3-205ENST00000563854 HCRTR1O43613 425 aa17.06■□□□□ 0.32
NME3-205ENST00000563854 MSL3P1P0C860 447 aa17.06■□□□□ 0.32
NME3-205ENST00000563854 AGXTP21549 392 aa17.06■□□□□ 0.32
NME3-205ENST00000563854 PEBP1P30086 187 aaKnown RBP17.06■□□□□ 0.32
NME3-205ENST00000563854 PTGIRP43119 386 aa17.06■□□□□ 0.32
NME3-205ENST00000563854 NPY2RP49146 381 aa17.06■□□□□ 0.32
NME3-205ENST00000563854 RAB28P51157 221 aa17.06■□□□□ 0.32
NME3-205ENST00000563854 CCL11P51671 97 aa17.06■□□□□ 0.32
NME3-205ENST00000563854 KLRB1Q12918 225 aa17.06■□□□□ 0.32
NME3-205ENST00000563854 KIR2DS3Q14952 304 aa17.06■□□□□ 0.32
NME3-205ENST00000563854 ZNF517Q6ZMY9 492 aaPredicted RBP17.06■□□□□ 0.32
NME3-205ENST00000563854 DCUN1D3Q8IWE4 304 aa17.06■□□□□ 0.32
NME3-205ENST00000563854 TEX19Q8NA77 164 aa17.06■□□□□ 0.32
NME3-205ENST00000563854 MFSD3Q96ES6 412 aa17.06■□□□□ 0.32
NME3-205ENST00000563854 SGSM3Q96HU1 749 aa17.06■□□□□ 0.32
NME3-205ENST00000563854 PANX3Q96QZ0 392 aa17.06■□□□□ 0.32
NME3-205ENST00000563854 NLNQ9BYT8 704 aa17.06■□□□□ 0.32
NME3-205ENST00000563854 SPRTNQ9H040 489 aaPredicted RBP17.06■□□□□ 0.32
NME3-205ENST00000563854 TREX1Q9NSU2 369 aa17.06■□□□□ 0.32
NME3-205ENST00000563854 TCFL5Q9UL49 500 aa17.06■□□□□ 0.32
NME3-205ENST00000563854 KLHL20Q9Y2M5 609 aa17.06■□□□□ 0.32
NME3-205ENST00000563854 TCRBV7S3A2A0A539 114 aa17.05■□□□□ 0.32
NME3-205ENST00000563854 GPC4O75487 556 aa17.05■□□□□ 0.32
NME3-205ENST00000563854 VAPBO95292 243 aa17.05■□□□□ 0.32
NME3-205ENST00000563854 CTSBP07858 339 aa17.05■□□□□ 0.32
NME3-205ENST00000563854 HBQ1P09105 142 aa17.05■□□□□ 0.32
NME3-205ENST00000563854 RAB40ALP0C0E4 278 aa17.05■□□□□ 0.32
NME3-205ENST00000563854 AOAHP28039 575 aa17.05■□□□□ 0.32
NME3-205ENST00000563854 BDKRB1P46663 353 aa17.05■□□□□ 0.32
NME3-205ENST00000563854 GPS1Q13098 491 aa17.05■□□□□ 0.32
NME3-205ENST00000563854 SLC9A5Q14940 896 aa17.05■□□□□ 0.32
NME3-205ENST00000563854 NCF4Q15080 339 aa17.05■□□□□ 0.32
NME3-205ENST00000563854 SLC5A12Q1EHB4 618 aa17.05■□□□□ 0.32
NME3-205ENST00000563854 TCTN3Q6NUS6 607 aa17.05■□□□□ 0.32
NME3-205ENST00000563854 CASC4Q6P4E1 433 aa17.05■□□□□ 0.32
NME3-205ENST00000563854 APLFQ8IW19 511 aaPredicted RBP17.05■□□□□ 0.32
NME3-205ENST00000563854 ZNF655Q8N720 491 aaPredicted RBP17.05■□□□□ 0.32
NME3-205ENST00000563854 PRELID2Q8N945 189 aa17.05■□□□□ 0.32
NME3-205ENST00000563854 FLVCR1-AS1Q8TAF5 88 aa17.05■□□□□ 0.32
NME3-205ENST00000563854 FAM136AQ96C01 138 aa17.05■□□□□ 0.32
NME3-205ENST00000563854 ING2Q9H160 280 aa17.05■□□□□ 0.32
NME3-205ENST00000563854 HOMER3Q9NSC5 361 aa17.05■□□□□ 0.32
NME3-205ENST00000563854 CAMSAP3Q9P1Y5 1249 aaPredicted RBP17.05■□□□□ 0.32
NME3-205ENST00000563854 SLC39A10Q9ULF5 831 aa17.05■□□□□ 0.32
NME3-205ENST00000563854 RUVBL2Q9Y230 463 aaKnown RBP17.05■□□□□ 0.32
NME3-205ENST00000563854 MYO18BQ8IUG5 2567 aa17.05■□□□□ 0.32
NME3-205ENST00000563854 ZSCAN9O15535 394 aaPredicted RBP17.04■□□□□ 0.32
NME3-205ENST00000563854 PDGFAP04085 211 aa17.04■□□□□ 0.32
NME3-205ENST00000563854 TPSB2P20231 275 aa17.04■□□□□ 0.32
NME3-205ENST00000563854 MAGP20916 626 aa17.04■□□□□ 0.32
NME3-205ENST00000563854 OTX2P32243 289 aa17.04■□□□□ 0.32
NME3-205ENST00000563854 TPSAB1Q15661 275 aa17.04■□□□□ 0.32
NME3-205ENST00000563854 IGFBP7Q16270 282 aa17.04■□□□□ 0.32
NME3-205ENST00000563854 KYNUQ16719 465 aa17.04■□□□□ 0.32
NME3-205ENST00000563854 MLIPQ5VWP3 458 aa17.04■□□□□ 0.32
NME3-205ENST00000563854 LRRC8BQ6P9F7 803 aa17.04■□□□□ 0.32
NME3-205ENST00000563854 TTC23LQ6PF05 361 aa17.04■□□□□ 0.32
NME3-205ENST00000563854 CNSTQ6PJW8 725 aa17.04■□□□□ 0.32
NME3-205ENST00000563854 UNC5DQ6UXZ4 953 aa17.04■□□□□ 0.32
NME3-205ENST00000563854 OTOAQ7RTW8 1153 aa17.04■□□□□ 0.32
NME3-205ENST00000563854 LINC01555Q8NAE3 123 aa17.04■□□□□ 0.32
NME3-205ENST00000563854 SLC25A23Q9BV35 468 aa17.04■□□□□ 0.32
NME3-205ENST00000563854 P2RY12Q9H244 342 aa17.04■□□□□ 0.32
NME3-205ENST00000563854 TXLNGQ9NUQ3 528 aa17.04■□□□□ 0.32
NME3-205ENST00000563854 DHCR7Q9UBM7 475 aaKnown RBP17.04■□□□□ 0.32
NME3-205ENST00000563854 GPN3Q9UHW5 284 aaPredicted RBP17.04■□□□□ 0.32
NME3-205ENST00000563854 NFS1Q9Y697 457 aa17.04■□□□□ 0.32
NME3-205ENST00000563854 KRT87PA6NCN2 255 aa17.03■□□□□ 0.32
NME3-205ENST00000563854 AVILO75366 819 aa17.03■□□□□ 0.32
NME3-205ENST00000563854 TMEM63AO94886 807 aa17.03■□□□□ 0.32
NME3-205ENST00000563854 KRT14P02533 472 aa17.03■□□□□ 0.32
NME3-205ENST00000563854 CAPN1P07384 714 aa17.03■□□□□ 0.32
NME3-205ENST00000563854 CBSLP0DN79 551 aa17.03■□□□□ 0.32
NME3-205ENST00000563854 CD9P21926 228 aa17.03■□□□□ 0.32
NME3-205ENST00000563854 FMO4P31512 558 aa17.03■□□□□ 0.32
NME3-205ENST00000563854 CBSP35520 551 aa17.03■□□□□ 0.32
NME3-205ENST00000563854 PGDP52209 483 aa17.03■□□□□ 0.32
NME3-205ENST00000563854 CDK16Q00536 496 aa17.03■□□□□ 0.32
NME3-205ENST00000563854 MRNIPQ6NTE8 343 aa17.03■□□□□ 0.32
NME3-205ENST00000563854 TTC27Q6P3X3 843 aa17.03■□□□□ 0.32
NME3-205ENST00000563854 SDCCAG8Q86SQ7 713 aaPredicted RBP17.03■□□□□ 0.32
NME3-205ENST00000563854 LRRC6Q86X45 466 aa17.03■□□□□ 0.32
NME3-205ENST00000563854 MPP5Q8N3R9 675 aa17.03■□□□□ 0.32
NME3-205ENST00000563854 MS4A14Q96JA4 679 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms