RNA–Protein interactions for RNA: ENST00000563400.1

VPS35P1-201, Transcript of VPS35, retromer complex component pseudogene 1, humanhuman

BASIC

Gene VPS35P1, Length 1,518 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS35P1-201ENST00000563400 OR14L1PQ8NHC6 308 aa5.09□□□□□ -1.59
VPS35P1-201ENST00000563400 LILRB4Q8NHJ6 448 aa5.09□□□□□ -1.59
VPS35P1-201ENST00000563400 C9orf43Q8TAL5 461 aaPredicted RBP5.09□□□□□ -1.59
VPS35P1-201ENST00000563400 TAS1R2Q8TE23 839 aa5.09□□□□□ -1.59
VPS35P1-201ENST00000563400 ST8SIA2Q92186 375 aa5.09□□□□□ -1.59
VPS35P1-201ENST00000563400 TMIGD2Q96BF3 282 aa5.09□□□□□ -1.59
VPS35P1-201ENST00000563400 PHF21BQ96EK2 531 aa5.09□□□□□ -1.59
VPS35P1-201ENST00000563400 NRBF2Q96F24 287 aa5.09□□□□□ -1.59
VPS35P1-201ENST00000563400 VCPIP1Q96JH7 1222 aa5.09□□□□□ -1.59
VPS35P1-201ENST00000563400 USP28Q96RU2 1077 aa5.09□□□□□ -1.59
VPS35P1-201ENST00000563400 TMEM209Q96SK2 561 aa5.09□□□□□ -1.59
VPS35P1-201ENST00000563400 SSX3Q99909 188 aa5.09□□□□□ -1.59
VPS35P1-201ENST00000563400 DPCDQ9BVM2 203 aaPredicted RBP5.09□□□□□ -1.59
VPS35P1-201ENST00000563400 CDCP1Q9H5V8 836 aa5.09□□□□□ -1.59
VPS35P1-201ENST00000563400 XKR8Q9H6D3 395 aa5.09□□□□□ -1.59
VPS35P1-201ENST00000563400 TMEM161AQ9NX61 479 aa5.09□□□□□ -1.59
VPS35P1-201ENST00000563400 GPR160Q9UJ42 338 aa5.09□□□□□ -1.59
VPS35P1-201ENST00000563400 C13orf42A0A1B0GVH6 325 aa5.08□□□□□ -1.6
VPS35P1-201ENST00000563400 C17orf102A2RUQ5 167 aa5.08□□□□□ -1.6
VPS35P1-201ENST00000563400 ANKDD1BA6NHY2 528 aa5.08□□□□□ -1.6
VPS35P1-201ENST00000563400 KLRF2D3W0D1 207 aa5.08□□□□□ -1.6
VPS35P1-201ENST00000563400 XPO1O14980 1071 aaKnown RBP5.08□□□□□ -1.6
VPS35P1-201ENST00000563400 CETN3O15182 167 aa5.08□□□□□ -1.6
VPS35P1-201ENST00000563400 CASC3O15234 703 aaKnown RBP5.08□□□□□ -1.6
VPS35P1-201ENST00000563400 MAPK13O15264 365 aa5.08□□□□□ -1.6
VPS35P1-201ENST00000563400 TEX28O15482 410 aa5.08□□□□□ -1.6
VPS35P1-201ENST00000563400 RANBP6O60518 1105 aaKnown RBP5.08□□□□□ -1.6
VPS35P1-201ENST00000563400 CTAG2O75638 210 aa5.08□□□□□ -1.6
VPS35P1-201ENST00000563400 TOM1L1O75674 476 aa5.08□□□□□ -1.6
VPS35P1-201ENST00000563400 RHBDL1O75783 438 aa5.08□□□□□ -1.6
VPS35P1-201ENST00000563400 GLCEO94923 617 aa5.08□□□□□ -1.6
VPS35P1-201ENST00000563400 CH25HO95992 272 aa5.08□□□□□ -1.6
VPS35P1-201ENST00000563400 KNG1P01042 644 aa5.08□□□□□ -1.6
VPS35P1-201ENST00000563400 JUNP05412 331 aaKnown RBP5.08□□□□□ -1.6
VPS35P1-201ENST00000563400 LINGO3P0C6S8 592 aa5.08□□□□□ -1.6
VPS35P1-201ENST00000563400 HSPD1P10809 573 aaKnown RBP5.08□□□□□ -1.6
VPS35P1-201ENST00000563400 IRF1P10914 325 aa5.08□□□□□ -1.6
VPS35P1-201ENST00000563400 G6PDP11413 515 aa5.08□□□□□ -1.6
VPS35P1-201ENST00000563400 ZNF182P17025 639 aaPredicted RBP5.08□□□□□ -1.6
VPS35P1-201ENST00000563400 IGFBP2P18065 325 aa5.08□□□□□ -1.6
VPS35P1-201ENST00000563400 ITGALP20701 1170 aa5.08□□□□□ -1.6
VPS35P1-201ENST00000563400 DRD4P21917 467 aa5.08□□□□□ -1.6
VPS35P1-201ENST00000563400 CALB2P22676 271 aa5.08□□□□□ -1.6
VPS35P1-201ENST00000563400 CHMLP26374 656 aa5.08□□□□□ -1.6
VPS35P1-201ENST00000563400 GSTM2P28161 218 aa5.08□□□□□ -1.6
VPS35P1-201ENST00000563400 TYK2P29597 1187 aa5.08□□□□□ -1.6
VPS35P1-201ENST00000563400 PPIFP30405 207 aaKnown RBP5.08□□□□□ -1.6
VPS35P1-201ENST00000563400 MAGEB1P43366 347 aa5.08□□□□□ -1.6
VPS35P1-201ENST00000563400 HTR6P50406 440 aa5.08□□□□□ -1.6
VPS35P1-201ENST00000563400 HNRNPFP52597 415 aaKnown RBP5.08□□□□□ -1.6
VPS35P1-201ENST00000563400 DGKQP52824 942 aa5.08□□□□□ -1.6
VPS35P1-201ENST00000563400 AP3M2P53677 418 aa5.08□□□□□ -1.6
VPS35P1-201ENST00000563400 PRMT2P55345 433 aa5.08□□□□□ -1.6
VPS35P1-201ENST00000563400 CLDN2P57739 230 aa5.08□□□□□ -1.6
VPS35P1-201ENST00000563400 ADAM8P78325 824 aa5.08□□□□□ -1.6
VPS35P1-201ENST00000563400 MESP2Q0VG99 397 aa5.08□□□□□ -1.6
VPS35P1-201ENST00000563400 GRIK3Q13003 919 aa5.08□□□□□ -1.6
VPS35P1-201ENST00000563400 PPIL2Q13356 520 aa5.08□□□□□ -1.6
VPS35P1-201ENST00000563400 FZD5Q13467 585 aa5.08□□□□□ -1.6
VPS35P1-201ENST00000563400 TOP3AQ13472 1001 aaPredicted RBP5.08□□□□□ -1.6
VPS35P1-201ENST00000563400 ARHGAP19Q14CB8 494 aa5.08□□□□□ -1.6
VPS35P1-201ENST00000563400 SPDYCQ5MJ68 293 aa5.08□□□□□ -1.6
VPS35P1-201ENST00000563400 AKNAD1Q5T1N1 836 aa5.08□□□□□ -1.6
VPS35P1-201ENST00000563400 PRAMEF20Q5VT98 475 aa5.08□□□□□ -1.6
VPS35P1-201ENST00000563400 DENND6AQ8IWF6 608 aa5.08□□□□□ -1.6
VPS35P1-201ENST00000563400 CMTM4Q8IZR5 234 aa5.08□□□□□ -1.6
VPS35P1-201ENST00000563400 LINC00469Q8N7U9 141 aa5.08□□□□□ -1.6
VPS35P1-201ENST00000563400 SCAIQ8N9R8 606 aa5.08□□□□□ -1.6
VPS35P1-201ENST00000563400 GDPD5Q8WTR4 605 aa5.08□□□□□ -1.6
VPS35P1-201ENST00000563400 OSCP1Q8WVF1 389 aa5.08□□□□□ -1.6
VPS35P1-201ENST00000563400 C17orf50Q8WW18 174 aa5.08□□□□□ -1.6
VPS35P1-201ENST00000563400 RIT1Q92963 219 aa5.08□□□□□ -1.6
VPS35P1-201ENST00000563400 FAM46BQ96A09 425 aa5.08□□□□□ -1.6
VPS35P1-201ENST00000563400 ESAMQ96AP7 390 aa5.08□□□□□ -1.6
VPS35P1-201ENST00000563400 DHX58Q96C10 678 aa5.08□□□□□ -1.6
VPS35P1-201ENST00000563400 FYTTD1Q96QD9 318 aaKnown RBP5.08□□□□□ -1.6
VPS35P1-201ENST00000563400 BBS4Q96RK4 519 aa5.08□□□□□ -1.6
VPS35P1-201ENST00000563400 OLFM1Q99784 485 aa5.08□□□□□ -1.6
VPS35P1-201ENST00000563400 ADAM2Q99965 735 aa5.08□□□□□ -1.6
VPS35P1-201ENST00000563400 DDX47Q9H0S4 455 aaKnown RBP5.08□□□□□ -1.6
VPS35P1-201ENST00000563400 EPC1Q9H2F5 836 aa5.08□□□□□ -1.6
VPS35P1-201ENST00000563400 KCNK15Q9H427 330 aa5.08□□□□□ -1.6
VPS35P1-201ENST00000563400 METTL7AQ9H8H3 244 aa5.08□□□□□ -1.6
VPS35P1-201ENST00000563400 NDUFA13Q9P0J0 144 aa5.08□□□□□ -1.6
VPS35P1-201ENST00000563400 CTTNBP2NLQ9P2B4 639 aa5.08□□□□□ -1.6
VPS35P1-201ENST00000563400 LARSQ9P2J5 1176 aaKnown RBP5.08□□□□□ -1.6
VPS35P1-201ENST00000563400 ANKFY1Q9P2R3 1169 aa5.08□□□□□ -1.6
VPS35P1-201ENST00000563400 IL17BQ9UHF5 180 aa5.08□□□□□ -1.6
VPS35P1-201ENST00000563400 CROTQ9UKG9 612 aa5.08□□□□□ -1.6
VPS35P1-201ENST00000563400 PLA2G4CQ9UP65 541 aa5.08□□□□□ -1.6
VPS35P1-201ENST00000563400 DDX52Q9Y2R4 599 aaKnown RBP eCLIP5.08□□□□□ -1.6
VPS35P1-201ENST00000563400 MFHAS1Q9Y4C4 1052 aa5.08□□□□□ -1.6
VPS35P1-201ENST00000563400 SBF1O95248 1867 aa5.08□□□□□ -1.6
VPS35P1-201ENST00000563400 CACNA1SQ13698 1873 aa5.08□□□□□ -1.6
VPS35P1-201ENST00000563400 CCDC88AQ3V6T2 1871 aa5.08□□□□□ -1.6
VPS35P1-201ENST00000563400 COL11A2P13942 1736 aaPredicted RBP5.08□□□□□ -1.6
VPS35P1-201ENST00000563400 CCDC195A0A1B0GUA6 201 aa5.07□□□□□ -1.6
VPS35P1-201ENST00000563400 H0YIG0 161 aa5.07□□□□□ -1.6
VPS35P1-201ENST00000563400 DSCR3O14972 297 aa5.07□□□□□ -1.6
VPS35P1-201ENST00000563400 CHADO15335 359 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms