RNA–Protein interactions for RNA: ENST00000563220.1

COMMD4-208, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 1,897 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-208ENST00000563220 PIK3CGP48736 1102 aa17.56■□□□□ 0.4
COMMD4-208ENST00000563220 STARD6P59095 220 aa17.56■□□□□ 0.4
COMMD4-208ENST00000563220 XKR7Q5GH72 579 aa17.56■□□□□ 0.4
COMMD4-208ENST00000563220 AGTRAPQ6RW13 159 aa17.56■□□□□ 0.4
COMMD4-208ENST00000563220 SNX31Q8N9S9 440 aa17.56■□□□□ 0.4
COMMD4-208ENST00000563220 OR2T11Q8NH01 316 aa17.56■□□□□ 0.4
COMMD4-208ENST00000563220 UTP4Q969X6 686 aaKnown RBP17.56■□□□□ 0.4
COMMD4-208ENST00000563220 TUBGCP3Q96CW5 907 aa17.56■□□□□ 0.4
COMMD4-208ENST00000563220 BMFQ96LC9 184 aa17.56■□□□□ 0.4
COMMD4-208ENST00000563220 BTBD10Q9BSF8 475 aa17.56■□□□□ 0.4
COMMD4-208ENST00000563220 TBC1D10AQ9BXI6 508 aa17.56■□□□□ 0.4
COMMD4-208ENST00000563220 DNAJC11Q9NVH1 559 aa17.56■□□□□ 0.4
COMMD4-208ENST00000563220 PSMD13Q9UNM6 376 aa17.56■□□□□ 0.4
COMMD4-208ENST00000563220 PLEKHM1Q9Y4G2 1056 aa17.56■□□□□ 0.4
COMMD4-208ENST00000563220 FAM170BA6NMN3 283 aa17.56■□□□□ 0.4
COMMD4-208ENST00000563220 CACNB4O00305 520 aaPredicted RBP17.56■□□□□ 0.4
COMMD4-208ENST00000563220 PRAMEF4O60810 478 aa17.56■□□□□ 0.4
COMMD4-208ENST00000563220 SEMA4FO95754 770 aa17.56■□□□□ 0.4
COMMD4-208ENST00000563220 IGLV3-19P01714 112 aa17.56■□□□□ 0.4
COMMD4-208ENST00000563220 KRT16P08779 473 aa17.56■□□□□ 0.4
COMMD4-208ENST00000563220 ALDOCP09972 364 aaKnown RBP17.56■□□□□ 0.4
COMMD4-208ENST00000563220 NAE1Q13564 534 aa17.56■□□□□ 0.4
COMMD4-208ENST00000563220 LRRC32Q14392 662 aa17.56■□□□□ 0.4
COMMD4-208ENST00000563220 PRAMEF9Q5VWM5 478 aa17.56■□□□□ 0.4
COMMD4-208ENST00000563220 Q6ZSR9 355 aa17.56■□□□□ 0.4
COMMD4-208ENST00000563220 PDZD3Q86UT5 571 aa17.56■□□□□ 0.4
COMMD4-208ENST00000563220 PPFIBP2Q8ND30 876 aa17.56■□□□□ 0.4
COMMD4-208ENST00000563220 PHC3Q8NDX5 983 aa17.56■□□□□ 0.4
COMMD4-208ENST00000563220 ATL1Q8WXF7 558 aa17.56■□□□□ 0.4
COMMD4-208ENST00000563220 FBXL21Q9UKT6 434 aa17.56■□□□□ 0.4
COMMD4-208ENST00000563220 SUFUQ9UMX1 484 aa17.56■□□□□ 0.4
COMMD4-208ENST00000563220 CYP8B1Q9UNU6 501 aa17.56■□□□□ 0.4
COMMD4-208ENST00000563220 MRPS17Q9Y2R5 130 aaKnown RBP17.56■□□□□ 0.4
COMMD4-208ENST00000563220 KANSL1LA0AUZ9 987 aa17.55■□□□□ 0.4
COMMD4-208ENST00000563220 LATO43561 262 aa17.55■□□□□ 0.4
COMMD4-208ENST00000563220 COX4I1P13073 169 aa17.55■□□□□ 0.4
COMMD4-208ENST00000563220 ACP5P13686 325 aa17.55■□□□□ 0.4
COMMD4-208ENST00000563220 HNRNPA2B1P22626 353 aaKnown RBP17.55■□□□□ 0.4
COMMD4-208ENST00000563220 PRDX6P30041 224 aa17.55■□□□□ 0.4
COMMD4-208ENST00000563220 ADSLP30566 484 aaPredicted RBP17.55■□□□□ 0.4
COMMD4-208ENST00000563220 GTF2A1P52655 376 aaPredicted RBP17.55■□□□□ 0.4
COMMD4-208ENST00000563220 PYCR3Q53H96 274 aa17.55■□□□□ 0.4
COMMD4-208ENST00000563220 HABP4Q5JVS0 413 aaKnown RBP17.55■□□□□ 0.4
COMMD4-208ENST00000563220 IL27RAQ6UWB1 636 aa17.55■□□□□ 0.4
COMMD4-208ENST00000563220 RBM15BQ8NDT2 890 aaKnown RBP17.55■□□□□ 0.4
COMMD4-208ENST00000563220 DENND6BQ8NEG7 585 aa17.55■□□□□ 0.4
COMMD4-208ENST00000563220 HMGCLL1Q8TB92 370 aa17.55■□□□□ 0.4
COMMD4-208ENST00000563220 CMTM5Q96DZ9 223 aa17.55■□□□□ 0.4
COMMD4-208ENST00000563220 HHIPQ96QV1 700 aa17.55■□□□□ 0.4
COMMD4-208ENST00000563220 UHRF1Q96T88 793 aaPredicted RBP17.55■□□□□ 0.4
COMMD4-208ENST00000563220 C6orf106Q9H6K1 298 aaPredicted RBP17.55■□□□□ 0.4
COMMD4-208ENST00000563220 RMI1Q9H9A7 625 aa17.55■□□□□ 0.4
COMMD4-208ENST00000563220 TRPS1Q9UHF7 1281 aa17.55■□□□□ 0.4
COMMD4-208ENST00000563220 MOSPD1Q9UJG1 213 aa17.55■□□□□ 0.4
COMMD4-208ENST00000563220 FPGTO14772 594 aa17.54■□□□□ 0.4
COMMD4-208ENST00000563220 FFAR3O14843 346 aa17.54■□□□□ 0.4
COMMD4-208ENST00000563220 SLC22A2O15244 555 aa17.54■□□□□ 0.4
COMMD4-208ENST00000563220 GPR42O15529 346 aa17.54■□□□□ 0.4
COMMD4-208ENST00000563220 PEX11AO75192 247 aa17.54■□□□□ 0.4
COMMD4-208ENST00000563220 CLDN9O95484 217 aa17.54■□□□□ 0.4
COMMD4-208ENST00000563220 HOXC4P09017 264 aaPredicted RBP17.54■□□□□ 0.4
COMMD4-208ENST00000563220 PRR35P0CG20 571 aa17.54■□□□□ 0.4
COMMD4-208ENST00000563220 RPL10P27635 214 aaKnown RBP17.54■□□□□ 0.4
COMMD4-208ENST00000563220 HMOX2P30519 316 aa17.54■□□□□ 0.4
COMMD4-208ENST00000563220 ABRAXAS2Q15018 415 aa17.54■□□□□ 0.4
COMMD4-208ENST00000563220 TPRG1LQ5T0D9 272 aa17.54■□□□□ 0.4
COMMD4-208ENST00000563220 THOC6Q86W42 341 aaKnown RBP17.54■□□□□ 0.4
COMMD4-208ENST00000563220 SIX5Q8N196 739 aa17.54■□□□□ 0.4
COMMD4-208ENST00000563220 LMNTD1Q8N9Z9 388 aa17.54■□□□□ 0.4
COMMD4-208ENST00000563220 OR9A1PQ8NGU1 263 aa17.54■□□□□ 0.4
COMMD4-208ENST00000563220 OR56A3Q8NH54 315 aa17.54■□□□□ 0.4
COMMD4-208ENST00000563220 ZNF480Q8WV37 535 aa17.54■□□□□ 0.4
COMMD4-208ENST00000563220 TFGQ92734 400 aaPredicted RBP17.54■□□□□ 0.4
COMMD4-208ENST00000563220 TOE1Q96GM8 510 aaKnown RBP17.54■□□□□ 0.4
COMMD4-208ENST00000563220 SCARF2Q96GP6 870 aaPredicted RBP17.54■□□□□ 0.4
COMMD4-208ENST00000563220 HBEGFQ99075 208 aa17.54■□□□□ 0.4
COMMD4-208ENST00000563220 CADM1Q9BY67 442 aaKnown RBP17.54■□□□□ 0.4
COMMD4-208ENST00000563220 ACTR8Q9H981 624 aa17.54■□□□□ 0.4
COMMD4-208ENST00000563220 FGF22Q9HCT0 170 aa17.54■□□□□ 0.4
COMMD4-208ENST00000563220 ASF1AQ9Y294 204 aa17.54■□□□□ 0.4
COMMD4-208ENST00000563220 SCAMP1O15126 338 aa17.54■□□□□ 0.4
COMMD4-208ENST00000563220 GYG2O15488 501 aa17.54■□□□□ 0.4
COMMD4-208ENST00000563220 VPS4BO75351 444 aa17.54■□□□□ 0.4
COMMD4-208ENST00000563220 LBPP18428 481 aa17.54■□□□□ 0.4
COMMD4-208ENST00000563220 DMPKQ09013 629 aa17.54■□□□□ 0.4
COMMD4-208ENST00000563220 UNC5DQ6UXZ4 953 aa17.54■□□□□ 0.4
COMMD4-208ENST00000563220 LONP2Q86WA8 852 aa17.54■□□□□ 0.4
COMMD4-208ENST00000563220 MYLK4Q86YV6 388 aaPredicted RBP17.54■□□□□ 0.4
COMMD4-208ENST00000563220 KLHDC8AQ8IYD2 350 aa17.54■□□□□ 0.4
COMMD4-208ENST00000563220 SFRP1Q8N474 314 aa17.54■□□□□ 0.4
COMMD4-208ENST00000563220 FRMD1Q8N878 549 aa17.54■□□□□ 0.4
COMMD4-208ENST00000563220 TSTD1Q8NFU3 115 aa17.54■□□□□ 0.4
COMMD4-208ENST00000563220 OR5AR1Q8NGP9 310 aa17.54■□□□□ 0.4
COMMD4-208ENST00000563220 MED8Q96G25 268 aa17.54■□□□□ 0.4
COMMD4-208ENST00000563220 OR4K3Q96R72 315 aa17.54■□□□□ 0.4
COMMD4-208ENST00000563220 CCT7Q99832 543 aa17.54■□□□□ 0.4
COMMD4-208ENST00000563220 FARSBQ9NSD9 589 aaKnown RBP17.54■□□□□ 0.4
COMMD4-208ENST00000563220 KCNK6Q9Y257 313 aa17.54■□□□□ 0.4
COMMD4-208ENST00000563220 WDR37Q9Y2I8 494 aa17.54■□□□□ 0.4
COMMD4-208ENST00000563220 GPSM3Q9Y4H4 160 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms