RNA–Protein interactions for RNA: ENST00000561276.5

LRRC28-221, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 967 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-221ENST00000561276 SQSTM1Q13501 440 aa9.98□□□□□ -0.81
LRRC28-221ENST00000561276 PHKG1Q16816 387 aa9.98□□□□□ -0.81
LRRC28-221ENST00000561276 FAM83EQ2M2I3 478 aa9.98□□□□□ -0.81
LRRC28-221ENST00000561276 TAF1BQ53T94 588 aaPredicted RBP9.98□□□□□ -0.81
LRRC28-221ENST00000561276 EEF1AKMT2Q5JPI9 291 aaKnown RBP9.98□□□□□ -0.81
LRRC28-221ENST00000561276 FBXO38Q6PIJ6 1188 aa9.98□□□□□ -0.81
LRRC28-221ENST00000561276 ISCA2Q86U28 154 aa9.98□□□□□ -0.81
LRRC28-221ENST00000561276 AMIGO1Q86WK6 493 aa9.98□□□□□ -0.81
LRRC28-221ENST00000561276 DCUN1D3Q8IWE4 304 aa9.98□□□□□ -0.81
LRRC28-221ENST00000561276 CENPLQ8N0S6 344 aaPredicted RBP9.98□□□□□ -0.81
LRRC28-221ENST00000561276 PLD6Q8N2A8 252 aaKnown RBP9.98□□□□□ -0.81
LRRC28-221ENST00000561276 FBXO15Q8NCQ5 510 aaPredicted RBP9.98□□□□□ -0.81
LRRC28-221ENST00000561276 OR9A1PQ8NGU1 263 aa9.98□□□□□ -0.81
LRRC28-221ENST00000561276 KCTD4Q8WVF5 259 aa9.98□□□□□ -0.81
LRRC28-221ENST00000561276 NCSTNQ92542 709 aa9.98□□□□□ -0.81
LRRC28-221ENST00000561276 HIST1H2AHQ96KK5 128 aa9.98□□□□□ -0.81
LRRC28-221ENST00000561276 PKP4Q99569 1192 aa9.98□□□□□ -0.81
LRRC28-221ENST00000561276 HIST1H2AJQ99878 128 aa9.98□□□□□ -0.81
LRRC28-221ENST00000561276 H2AFJQ9BTM1 129 aa9.98□□□□□ -0.81
LRRC28-221ENST00000561276 TRIM54Q9BYV2 358 aa9.98□□□□□ -0.81
LRRC28-221ENST00000561276 XKR8Q9H6D3 395 aa9.98□□□□□ -0.81
LRRC28-221ENST00000561276 RDH14Q9HBH5 336 aa9.98□□□□□ -0.81
LRRC28-221ENST00000561276 NMRAL1Q9HBL8 299 aa9.98□□□□□ -0.81
LRRC28-221ENST00000561276 ZNF358Q9NW07 568 aa9.98□□□□□ -0.81
LRRC28-221ENST00000561276 WDR70Q9NW82 654 aa9.98□□□□□ -0.81
LRRC28-221ENST00000561276 HRASLS2Q9NWW9 162 aa9.98□□□□□ -0.81
LRRC28-221ENST00000561276 LNPEPQ9UIQ6 1025 aa9.98□□□□□ -0.81
LRRC28-221ENST00000561276 ICKQ9UPZ9 632 aa9.98□□□□□ -0.81
LRRC28-221ENST00000561276 APOBEC2Q9Y235 224 aaKnown RBP9.98□□□□□ -0.81
LRRC28-221ENST00000561276 PCDHGA1Q9Y5H4 931 aa9.98□□□□□ -0.81
LRRC28-221ENST00000561276 EP300Q09472 2414 aaPredicted RBP9.97□□□□□ -0.81
LRRC28-221ENST00000561276 ASXL3Q9C0F0 2248 aa9.97□□□□□ -0.81
LRRC28-221ENST00000561276 NPEPPSL1A6NEC2 478 aa9.97□□□□□ -0.81
LRRC28-221ENST00000561276 GOLGA8RI6L899 631 aa9.97□□□□□ -0.81
LRRC28-221ENST00000561276 BTN3A3O00478 584 aa9.97□□□□□ -0.81
LRRC28-221ENST00000561276 NTN3O00634 580 aaPredicted RBP9.97□□□□□ -0.81
LRRC28-221ENST00000561276 DKK1O94907 266 aa9.97□□□□□ -0.81
LRRC28-221ENST00000561276 RPLP0P05388 317 aaKnown RBP9.97□□□□□ -0.81
LRRC28-221ENST00000561276 PROS1P07225 676 aa9.97□□□□□ -0.81
LRRC28-221ENST00000561276 CDK4P11802 303 aa9.97□□□□□ -0.81
LRRC28-221ENST00000561276 COL6A2P12110 1019 aa9.97□□□□□ -0.81
LRRC28-221ENST00000561276 POLR2CP19387 275 aaPredicted RBP9.97□□□□□ -0.81
LRRC28-221ENST00000561276 TFEBP19484 476 aa9.97□□□□□ -0.81
LRRC28-221ENST00000561276 SHMT2P34897 504 aa9.97□□□□□ -0.81
LRRC28-221ENST00000561276 ATP6V0D1P61421 351 aa9.97□□□□□ -0.81
LRRC28-221ENST00000561276 CFHR1Q03591 330 aa9.97□□□□□ -0.81
LRRC28-221ENST00000561276 SP140Q13342 867 aa9.97□□□□□ -0.81
LRRC28-221ENST00000561276 PUM1Q14671 1186 aaKnown RBP eCLIP9.97□□□□□ -0.81
LRRC28-221ENST00000561276 CASP8Q14790 479 aa9.97□□□□□ -0.81
LRRC28-221ENST00000561276 ACAP2Q15057 778 aa9.97□□□□□ -0.81
LRRC28-221ENST00000561276 TSNQ15631 228 aaKnown RBP9.97□□□□□ -0.81
LRRC28-221ENST00000561276 KRT71Q3SY84 523 aa9.97□□□□□ -0.81
LRRC28-221ENST00000561276 CEP85LQ5SZL2 805 aa9.97□□□□□ -0.81
LRRC28-221ENST00000561276 KLHL35Q6PF15 583 aa9.97□□□□□ -0.81
LRRC28-221ENST00000561276 SBSNQ6UWP8 590 aa9.97□□□□□ -0.81
LRRC28-221ENST00000561276 DHRS13Q6UX07 377 aa9.97□□□□□ -0.81
LRRC28-221ENST00000561276 LRIG3Q6UXM1 1119 aa9.97□□□□□ -0.81
LRRC28-221ENST00000561276 ADGRF3Q8IZF5 1079 aa9.97□□□□□ -0.81
LRRC28-221ENST00000561276 RIBC1Q8N443 379 aaPredicted RBP9.97□□□□□ -0.81
LRRC28-221ENST00000561276 C2orf73Q8N5S3 287 aaPredicted RBP9.97□□□□□ -0.81
LRRC28-221ENST00000561276 LMNTD1Q8N9Z9 388 aa9.97□□□□□ -0.81
LRRC28-221ENST00000561276 ACMSDQ8TDX5 336 aa9.97□□□□□ -0.81
LRRC28-221ENST00000561276 KIAA1191Q96A73 305 aa9.97□□□□□ -0.81
LRRC28-221ENST00000561276 PTERQ96BW5 349 aa9.97□□□□□ -0.81
LRRC28-221ENST00000561276 CABS1Q96KC9 395 aa9.97□□□□□ -0.81
LRRC28-221ENST00000561276 CCDC138Q96M89 665 aa9.97□□□□□ -0.81
LRRC28-221ENST00000561276 GFM1Q96RP9 751 aaKnown RBP9.97□□□□□ -0.81
LRRC28-221ENST00000561276 MENTQ9BUN1 341 aa9.97□□□□□ -0.81
LRRC28-221ENST00000561276 SYNDIG1Q9H7V2 258 aa9.97□□□□□ -0.81
LRRC28-221ENST00000561276 IGSF5Q9NSI5 407 aa9.97□□□□□ -0.81
LRRC28-221ENST00000561276 ARL15Q9NXU5 204 aa9.97□□□□□ -0.81
LRRC28-221ENST00000561276 UTP6Q9NYH9 597 aaKnown RBP9.97□□□□□ -0.81
LRRC28-221ENST00000561276 OGFRQ9NZT2 677 aa9.97□□□□□ -0.81
LRRC28-221ENST00000561276 LGALS13Q9UHV8 139 aa9.97□□□□□ -0.81
LRRC28-221ENST00000561276 ATXN7L1Q9ULK2 861 aaPredicted RBP9.97□□□□□ -0.81
LRRC28-221ENST00000561276 NOVA2Q9UNW9 492 aaKnown RBP9.97□□□□□ -0.81
LRRC28-221ENST00000561276 PABPN1LA6NDY0 278 aaKnown RBP9.96□□□□□ -0.82
LRRC28-221ENST00000561276 OR5K3A6NET4 321 aa9.96□□□□□ -0.82
LRRC28-221ENST00000561276 MYO1CO00159 1063 aa9.96□□□□□ -0.82
LRRC28-221ENST00000561276 DUX1O43812 170 aa9.96□□□□□ -0.82
LRRC28-221ENST00000561276 CPNE6O95741 557 aa9.96□□□□□ -0.82
LRRC28-221ENST00000561276 GUCA1CO95843 209 aa9.96□□□□□ -0.82
LRRC28-221ENST00000561276 SLC16A8O95907 504 aa9.96□□□□□ -0.82
LRRC28-221ENST00000561276 ENO2P09104 434 aaPredicted RBP9.96□□□□□ -0.82
LRRC28-221ENST00000561276 ID4P47928 161 aa9.96□□□□□ -0.82
LRRC28-221ENST00000561276 GLRBP48167 497 aa9.96□□□□□ -0.82
LRRC28-221ENST00000561276 RAB28P51157 221 aa9.96□□□□□ -0.82
LRRC28-221ENST00000561276 INSM1Q01101 510 aaPredicted RBP9.96□□□□□ -0.82
LRRC28-221ENST00000561276 SPIDRQ14159 915 aa9.96□□□□□ -0.82
LRRC28-221ENST00000561276 OR4D1Q15615 310 aa9.96□□□□□ -0.82
LRRC28-221ENST00000561276 PPP1R3AQ16821 1122 aa9.96□□□□□ -0.82
LRRC28-221ENST00000561276 ARMC6Q6NXE6 501 aa9.96□□□□□ -0.82
LRRC28-221ENST00000561276 KLC3Q6P597 504 aa9.96□□□□□ -0.82
LRRC28-221ENST00000561276 TMEM71Q6P5X7 295 aa9.96□□□□□ -0.82
LRRC28-221ENST00000561276 WDR74Q6RFH5 385 aaPredicted RBP9.96□□□□□ -0.82
LRRC28-221ENST00000561276 ZNF574Q6ZN55 896 aaPredicted RBP9.96□□□□□ -0.82
LRRC28-221ENST00000561276 SH2D5Q6ZV89 423 aa9.96□□□□□ -0.82
LRRC28-221ENST00000561276 HDXQ7Z353 690 aa9.96□□□□□ -0.82
LRRC28-221ENST00000561276 TMPRSS9Q7Z410 1059 aa9.96□□□□□ -0.82
LRRC28-221ENST00000561276 CLEC14AQ86T13 490 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms