RNA–Protein interactions for RNA: ENST00000561076.1

RTF1-207, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 314 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-207ENST00000561076 GRID2O43424 1007 aa1.98□□□□□ -2.09
RTF1-207ENST00000561076 DCXO43602 365 aa1.98□□□□□ -2.09
RTF1-207ENST00000561076 RANBP6O60518 1105 aaKnown RBP1.98□□□□□ -2.09
RTF1-207ENST00000561076 ADAMTS4O75173 837 aa1.98□□□□□ -2.09
RTF1-207ENST00000561076 TRIM3O75382 744 aaPredicted RBP1.98□□□□□ -2.09
RTF1-207ENST00000561076 MTRF1O75570 445 aaKnown RBP1.98□□□□□ -2.09
RTF1-207ENST00000561076 RHBDL1O75783 438 aa1.98□□□□□ -2.09
RTF1-207ENST00000561076 BBOX1O75936 387 aa1.98□□□□□ -2.09
RTF1-207ENST00000561076 CDKL5O76039 1030 aa1.98□□□□□ -2.09
RTF1-207ENST00000561076 SLITRK3O94933 977 aa1.98□□□□□ -2.09
RTF1-207ENST00000561076 ARHGEF15O94989 841 aa1.98□□□□□ -2.09
RTF1-207ENST00000561076 ANP32DO95626 131 aa1.98□□□□□ -2.09
RTF1-207ENST00000561076 EGFP01133 1207 aa1.98□□□□□ -2.09
RTF1-207ENST00000561076 TGFB1P01137 390 aa1.98□□□□□ -2.09
RTF1-207ENST00000561076 NPPAP01160 153 aa1.98□□□□□ -2.09
RTF1-207ENST00000561076 IL1BP01584 269 aa1.98□□□□□ -2.09
RTF1-207ENST00000561076 CSF2P04141 144 aa1.98□□□□□ -2.09
RTF1-207ENST00000561076 LCATP04180 440 aa1.98□□□□□ -2.09
RTF1-207ENST00000561076 ICAM1P05362 532 aa1.98□□□□□ -2.09
RTF1-207ENST00000561076 LIPFP07098 398 aa1.98□□□□□ -2.09
RTF1-207ENST00000561076 C8AP07357 584 aa1.98□□□□□ -2.09
RTF1-207ENST00000561076 KRT19P08727 400 aa1.98□□□□□ -2.09
RTF1-207ENST00000561076 OR2T7P0C7T2 308 aa1.98□□□□□ -2.09
RTF1-207ENST00000561076 CLUP10909 449 aa1.98□□□□□ -2.09
RTF1-207ENST00000561076 DBTP11182 482 aaKnown RBP1.98□□□□□ -2.09
RTF1-207ENST00000561076 ENO3P13929 434 aaPredicted RBP1.98□□□□□ -2.09
RTF1-207ENST00000561076 EZRP15311 586 aaKnown RBP1.98□□□□□ -2.09
RTF1-207ENST00000561076 GNSP15586 552 aa1.98□□□□□ -2.09
RTF1-207ENST00000561076 DDX5P17844 614 aaKnown RBP1.98□□□□□ -2.09
RTF1-207ENST00000561076 GATA3P23771 443 aa1.98□□□□□ -2.09
RTF1-207ENST00000561076 CTNNA2P26232 953 aa1.98□□□□□ -2.09
RTF1-207ENST00000561076 PSMB4P28070 264 aa1.98□□□□□ -2.09
RTF1-207ENST00000561076 CTGFP29279 349 aa1.98□□□□□ -2.09
RTF1-207ENST00000561076 TACR3P29371 465 aa1.98□□□□□ -2.09
RTF1-207ENST00000561076 PPP2R1AP30153 589 aa1.98□□□□□ -2.09
RTF1-207ENST00000561076 AKT2P31751 481 aa1.98□□□□□ -2.09
RTF1-207ENST00000561076 GMPRP36959 345 aa1.98□□□□□ -2.09
RTF1-207ENST00000561076 CAPGP40121 348 aa1.98□□□□□ -2.09
RTF1-207ENST00000561076 USP8P40818 1118 aa1.98□□□□□ -2.09
RTF1-207ENST00000561076 MAGEB1P43366 347 aa1.98□□□□□ -2.09
RTF1-207ENST00000561076 ME1P48163 572 aa1.98□□□□□ -2.09
RTF1-207ENST00000561076 CNN1P51911 297 aaKnown RBP1.98□□□□□ -2.09
RTF1-207ENST00000561076 SUCLG1P53597 346 aaKnown RBP1.98□□□□□ -2.09
RTF1-207ENST00000561076 MAPK12P53778 367 aa1.98□□□□□ -2.09
RTF1-207ENST00000561076 MFAP3P55082 362 aa1.98□□□□□ -2.09
RTF1-207ENST00000561076 ADARP55265 1226 aaKnown RBP1.98□□□□□ -2.09
RTF1-207ENST00000561076 CD81P60033 236 aa1.98□□□□□ -2.09
RTF1-207ENST00000561076 MYBPC1Q00872 1141 aa1.98□□□□□ -2.09
RTF1-207ENST00000561076 RHAGQ02094 409 aa1.98□□□□□ -2.09
RTF1-207ENST00000561076 SLC18A2Q05940 514 aa1.98□□□□□ -2.09
RTF1-207ENST00000561076 SULT2A1Q06520 285 aa1.98□□□□□ -2.09
RTF1-207ENST00000561076 FGL1Q08830 312 aa1.98□□□□□ -2.09
RTF1-207ENST00000561076 CCDC173Q0VFZ6 552 aa1.98□□□□□ -2.09
RTF1-207ENST00000561076 ILF2Q12905 390 aaKnown RBP1.98□□□□□ -2.09
RTF1-207ENST00000561076 RESTQ13127 1097 aa1.98□□□□□ -2.09
RTF1-207ENST00000561076 PRKAA1Q13131 559 aa1.98□□□□□ -2.09
RTF1-207ENST00000561076 GAB1Q13480 694 aa1.98□□□□□ -2.09
RTF1-207ENST00000561076 MELKQ14680 651 aa1.98□□□□□ -2.09
RTF1-207ENST00000561076 KPNB1Q14974 876 aaKnown RBP1.98□□□□□ -2.09
RTF1-207ENST00000561076 RBBP7Q16576 425 aa1.98□□□□□ -2.09
RTF1-207ENST00000561076 CYP1B1Q16678 543 aa1.98□□□□□ -2.09
RTF1-207ENST00000561076 TATDN3Q17R31 274 aa1.98□□□□□ -2.09
RTF1-207ENST00000561076 CCDC142Q17RM4 750 aa1.98□□□□□ -2.09
RTF1-207ENST00000561076 KIF19Q2TAC6 998 aa1.98□□□□□ -2.09
RTF1-207ENST00000561076 POM121L1PQ3SYA9 428 aa1.98□□□□□ -2.09
RTF1-207ENST00000561076 ATP13A5Q4VNC0 1218 aa1.98□□□□□ -2.09
RTF1-207ENST00000561076 PDCD4Q53EL6 469 aaKnown RBP1.98□□□□□ -2.09
RTF1-207ENST00000561076 ESCO2Q56NI9 601 aa1.98□□□□□ -2.09
RTF1-207ENST00000561076 HSP90AA4PQ58FG1 418 aa1.98□□□□□ -2.09
RTF1-207ENST00000561076 DCAF6Q58WW2 860 aa1.98□□□□□ -2.09
RTF1-207ENST00000561076 CMPK2Q5EBM0 449 aa1.98□□□□□ -2.09
RTF1-207ENST00000561076 Q5PR19 223 aa1.98□□□□□ -2.09
RTF1-207ENST00000561076 CCDC122Q5T0U0 273 aa1.98□□□□□ -2.09
RTF1-207ENST00000561076 STXBP5Q5T5C0 1151 aa1.98□□□□□ -2.09
RTF1-207ENST00000561076 C1orf185Q5T7R7 199 aa1.98□□□□□ -2.09
RTF1-207ENST00000561076 FAM102AQ5T9C2 384 aaPredicted RBP1.98□□□□□ -2.09
RTF1-207ENST00000561076 CYP4A22Q5TCH4 519 aa1.98□□□□□ -2.09
RTF1-207ENST00000561076 VWA5B1Q5TIE3 1220 aa1.98□□□□□ -2.09
RTF1-207ENST00000561076 IL23RQ5VWK5 629 aa1.98□□□□□ -2.09
RTF1-207ENST00000561076 FAM46CQ5VWP2 391 aa1.98□□□□□ -2.09
RTF1-207ENST00000561076 PRAMEF7Q5VXH5 474 aa1.98□□□□□ -2.09
RTF1-207ENST00000561076 CARD17Q5XLA6 110 aa1.98□□□□□ -2.09
RTF1-207ENST00000561076 C11orf63Q6NUN7 778 aa1.98□□□□□ -2.09
RTF1-207ENST00000561076 ERICH5Q6P6B1 374 aa1.98□□□□□ -2.09
RTF1-207ENST00000561076 SLC27A1Q6PCB7 646 aa1.98□□□□□ -2.09
RTF1-207ENST00000561076 CTR9Q6PD62 1173 aa1.98□□□□□ -2.09
RTF1-207ENST00000561076 AAGABQ6PD74 315 aa1.98□□□□□ -2.09
RTF1-207ENST00000561076 FAM198BQ6UWH4 519 aa1.98□□□□□ -2.09
RTF1-207ENST00000561076 TPRG1Q6ZUI0 275 aa1.98□□□□□ -2.09
RTF1-207ENST00000561076 C16orf62Q7Z3J2 963 aa1.98□□□□□ -2.09
RTF1-207ENST00000561076 BNIPLQ7Z465 357 aa1.98□□□□□ -2.09
RTF1-207ENST00000561076 SERPINA11Q86U17 422 aa1.98□□□□□ -2.09
RTF1-207ENST00000561076 TSPAN33Q86UF1 283 aa1.98□□□□□ -2.09
RTF1-207ENST00000561076 NOXA1Q86UR1 476 aa1.98□□□□□ -2.09
RTF1-207ENST00000561076 ADIPOR2Q86V24 386 aa1.98□□□□□ -2.09
RTF1-207ENST00000561076 FAM228AQ86W67 206 aa1.98□□□□□ -2.09
RTF1-207ENST00000561076 NUDT13Q86X67 352 aa1.98□□□□□ -2.09
RTF1-207ENST00000561076 MEX3DQ86XN8 651 aaKnown RBP1.98□□□□□ -2.09
RTF1-207ENST00000561076 SPATA2LQ8IUW3 424 aaPredicted RBP1.98□□□□□ -2.09
RTF1-207ENST00000561076 SLC35F3Q8IY50 421 aa1.98□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms