RNA–Protein interactions for RNA: ENST00000560562.5

TNFAIP2-207, Transcript of TNF alpha induced protein 2, humanhuman

TSL 1 (best)

Gene TNFAIP2, Length 1,429 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP2-207ENST00000560562 DEFB110Q30KQ9 67 aa13.54□□□□□ -0.24
TNFAIP2-207ENST00000560562 PLEKHS1Q5SXH7 462 aa13.54□□□□□ -0.24
TNFAIP2-207ENST00000560562 TMTC4Q5T4D3 741 aa13.54□□□□□ -0.24
TNFAIP2-207ENST00000560562 CYB5D1Q6P9G0 228 aa13.54□□□□□ -0.24
TNFAIP2-207ENST00000560562 ZNF449Q6P9G9 518 aa13.54□□□□□ -0.24
TNFAIP2-207ENST00000560562 C4orf22Q6V702 233 aa13.54□□□□□ -0.24
TNFAIP2-207ENST00000560562 PRICKLE2Q7Z3G6 844 aa13.54□□□□□ -0.24
TNFAIP2-207ENST00000560562 BPHLQ86WA6 291 aaPredicted RBP13.54□□□□□ -0.24
TNFAIP2-207ENST00000560562 CEP112Q8N8E3 955 aa13.54□□□□□ -0.24
TNFAIP2-207ENST00000560562 OR8K5Q8NH50 307 aa13.54□□□□□ -0.24
TNFAIP2-207ENST00000560562 CPT1BQ92523 772 aa13.54□□□□□ -0.24
TNFAIP2-207ENST00000560562 IL17FQ96PD4 163 aa13.54□□□□□ -0.24
TNFAIP2-207ENST00000560562 TRIM4Q9C037 500 aa13.54□□□□□ -0.24
TNFAIP2-207ENST00000560562 CHST8Q9H2A9 424 aa13.54□□□□□ -0.24
TNFAIP2-207ENST00000560562 ADNPQ9H2P0 1102 aa13.54□□□□□ -0.24
TNFAIP2-207ENST00000560562 MRM3Q9HC36 420 aaKnown RBP13.54□□□□□ -0.24
TNFAIP2-207ENST00000560562 BFARQ9NZS9 450 aa13.54□□□□□ -0.24
TNFAIP2-207ENST00000560562 SOX13Q9UN79 622 aa13.54□□□□□ -0.24
TNFAIP2-207ENST00000560562 RUVBL2Q9Y230 463 aaKnown RBP13.54□□□□□ -0.24
TNFAIP2-207ENST00000560562 CDC14CA4D256 554 aa13.53□□□□□ -0.24
TNFAIP2-207ENST00000560562 J3QKU1 62 aa13.53□□□□□ -0.24
TNFAIP2-207ENST00000560562 SLCO2B1O94956 709 aa13.53□□□□□ -0.24
TNFAIP2-207ENST00000560562 VAPBO95292 243 aa13.53□□□□□ -0.24
TNFAIP2-207ENST00000560562 KRT14P02533 472 aa13.53□□□□□ -0.24
TNFAIP2-207ENST00000560562 MT-ND3P03897 115 aa13.53□□□□□ -0.24
TNFAIP2-207ENST00000560562 CAPN1P07384 714 aa13.53□□□□□ -0.24
TNFAIP2-207ENST00000560562 NR1D1P20393 614 aa13.53□□□□□ -0.24
TNFAIP2-207ENST00000560562 PKLRP30613 574 aa13.53□□□□□ -0.24
TNFAIP2-207ENST00000560562 SHMT2P34897 504 aa13.53□□□□□ -0.24
TNFAIP2-207ENST00000560562 TTPAP49638 278 aa13.53□□□□□ -0.24
TNFAIP2-207ENST00000560562 CDK16Q00536 496 aa13.53□□□□□ -0.24
TNFAIP2-207ENST00000560562 MC1RQ01726 317 aa13.53□□□□□ -0.24
TNFAIP2-207ENST00000560562 CYP1B1Q16678 543 aa13.53□□□□□ -0.24
TNFAIP2-207ENST00000560562 CCSMST1Q4G0I0 132 aa13.53□□□□□ -0.24
TNFAIP2-207ENST00000560562 AARS2Q5JTZ9 985 aaKnown RBP13.53□□□□□ -0.24
TNFAIP2-207ENST00000560562 FAM198BQ6UWH4 519 aa13.53□□□□□ -0.24
TNFAIP2-207ENST00000560562 PTRH1Q86Y79 214 aaKnown RBP13.53□□□□□ -0.24
TNFAIP2-207ENST00000560562 DSELQ8IZU8 1212 aa13.53□□□□□ -0.24
TNFAIP2-207ENST00000560562 C19orf47Q8N9M1 422 aaKnown RBP13.53□□□□□ -0.24
TNFAIP2-207ENST00000560562 LPGAT1Q92604 370 aa13.53□□□□□ -0.24
TNFAIP2-207ENST00000560562 BIRC8Q96P09 236 aa13.53□□□□□ -0.24
TNFAIP2-207ENST00000560562 HOMER3Q9NSC5 361 aa13.53□□□□□ -0.24
TNFAIP2-207ENST00000560562 PCMTD2Q9NV79 361 aa13.53□□□□□ -0.24
TNFAIP2-207ENST00000560562 KLHL20Q9Y2M5 609 aa13.53□□□□□ -0.24
TNFAIP2-207ENST00000560562 PCDHB3Q9Y5E6 796 aa13.53□□□□□ -0.24
TNFAIP2-207ENST00000560562 NFS1Q9Y697 457 aa13.53□□□□□ -0.24
TNFAIP2-207ENST00000560562 SAR1BQ9Y6B6 198 aa13.53□□□□□ -0.24
TNFAIP2-207ENST00000560562 DOCK10Q96BY6 2186 aa13.53□□□□□ -0.24
TNFAIP2-207ENST00000560562 HECTD1Q9ULT8 2610 aa13.52□□□□□ -0.24
TNFAIP2-207ENST00000560562 RP1L1Q8IWN7 2480 aaPredicted RBP13.52□□□□□ -0.24
TNFAIP2-207ENST00000560562 C21orf140B9A014 251 aa13.52□□□□□ -0.25
TNFAIP2-207ENST00000560562 ZNF185O15231 689 aa13.52□□□□□ -0.25
TNFAIP2-207ENST00000560562 SUV39H1O43463 412 aa13.52□□□□□ -0.25
TNFAIP2-207ENST00000560562 TCP1P17987 556 aaKnown RBP13.52□□□□□ -0.25
TNFAIP2-207ENST00000560562 RPS3P23396 243 aaKnown RBP eCLIP13.52□□□□□ -0.25
TNFAIP2-207ENST00000560562 COILP38432 576 aaPredicted RBP13.52□□□□□ -0.25
TNFAIP2-207ENST00000560562 EIF3BP55884 814 aaKnown RBP13.52□□□□□ -0.25
TNFAIP2-207ENST00000560562 PLOD1Q02809 727 aaPredicted RBP13.52□□□□□ -0.25
TNFAIP2-207ENST00000560562 KYNUQ16719 465 aa13.52□□□□□ -0.25
TNFAIP2-207ENST00000560562 ERCC6LQ2NKX8 1250 aa13.52□□□□□ -0.25
TNFAIP2-207ENST00000560562 TYSND1Q2T9J0 566 aa13.52□□□□□ -0.25
TNFAIP2-207ENST00000560562 PTCHD3Q3KNS1 767 aa13.52□□□□□ -0.25
TNFAIP2-207ENST00000560562 DNAJC21Q5F1R6 531 aaKnown RBP13.52□□□□□ -0.25
TNFAIP2-207ENST00000560562 ZNF385CQ66K41 422 aaPredicted RBP13.52□□□□□ -0.25
TNFAIP2-207ENST00000560562 C2orf73Q8N5S3 287 aaPredicted RBP13.52□□□□□ -0.25
TNFAIP2-207ENST00000560562 CFAP61Q8NHU2 1237 aa13.52□□□□□ -0.25
TNFAIP2-207ENST00000560562 APOBEC4Q8WW27 367 aaKnown RBP13.52□□□□□ -0.25
TNFAIP2-207ENST00000560562 ASZ1Q8WWH4 475 aa13.52□□□□□ -0.25
TNFAIP2-207ENST00000560562 MR1Q95460 341 aa13.52□□□□□ -0.25
TNFAIP2-207ENST00000560562 MAGOHBQ96A72 148 aaKnown RBP13.52□□□□□ -0.25
TNFAIP2-207ENST00000560562 ABHD17AQ96GS6 310 aa13.52□□□□□ -0.25
TNFAIP2-207ENST00000560562 PBKQ96KB5 322 aa13.52□□□□□ -0.25
TNFAIP2-207ENST00000560562 LRFN5Q96NI6 719 aa13.52□□□□□ -0.25
TNFAIP2-207ENST00000560562 TTC1Q99614 292 aa13.52□□□□□ -0.25
TNFAIP2-207ENST00000560562 ZNF71Q9NQZ8 489 aaPredicted RBP13.52□□□□□ -0.25
TNFAIP2-207ENST00000560562 OR6C2Q9NZP2 312 aa13.52□□□□□ -0.25
TNFAIP2-207ENST00000560562 GALPQ9UBC7 116 aa13.52□□□□□ -0.25
TNFAIP2-207ENST00000560562 POLG2Q9UHN1 485 aa13.52□□□□□ -0.25
TNFAIP2-207ENST00000560562 TUBD1Q9UJT1 453 aa13.52□□□□□ -0.25
TNFAIP2-207ENST00000560562 ANAPC5Q9UJX4 755 aa13.52□□□□□ -0.25
TNFAIP2-207ENST00000560562 KCND3Q9UK17 655 aa13.52□□□□□ -0.25
TNFAIP2-207ENST00000560562 SNX12Q9UMY4 172 aa13.52□□□□□ -0.25
TNFAIP2-207ENST00000560562 A0A0J9YY10 115 aa13.51□□□□□ -0.25
TNFAIP2-207ENST00000560562 GOLGA8MH3BSY2 632 aa13.51□□□□□ -0.25
TNFAIP2-207ENST00000560562 MEN1O00255 615 aa13.51□□□□□ -0.25
TNFAIP2-207ENST00000560562 NIPSNAP2O75323 286 aa13.51□□□□□ -0.25
TNFAIP2-207ENST00000560562 DNAJB5O75953 348 aa13.51□□□□□ -0.25
TNFAIP2-207ENST00000560562 SFTPCP11686 197 aa13.51□□□□□ -0.25
TNFAIP2-207ENST00000560562 PTPN4P29074 926 aa13.51□□□□□ -0.25
TNFAIP2-207ENST00000560562 BDKRB1P46663 353 aa13.51□□□□□ -0.25
TNFAIP2-207ENST00000560562 COLEC12Q5KU26 742 aa13.51□□□□□ -0.25
TNFAIP2-207ENST00000560562 CPZQ66K79 652 aa13.51□□□□□ -0.25
TNFAIP2-207ENST00000560562 PTRHD1Q6GMV3 140 aaKnown RBP13.51□□□□□ -0.25
TNFAIP2-207ENST00000560562 KIAA0930Q6ICG6 404 aaPredicted RBP13.51□□□□□ -0.25
TNFAIP2-207ENST00000560562 CCDC137Q6PK04 289 aaKnown RBP13.51□□□□□ -0.25
TNFAIP2-207ENST00000560562 CENPUQ71F23 418 aa13.51□□□□□ -0.25
TNFAIP2-207ENST00000560562 ZNF572Q7Z3I7 529 aaPredicted RBP13.51□□□□□ -0.25
TNFAIP2-207ENST00000560562 TAX1BP1Q86VP1 789 aa13.51□□□□□ -0.25
TNFAIP2-207ENST00000560562 TMEM151BQ8IW70 566 aa13.51□□□□□ -0.25
TNFAIP2-207ENST00000560562 FAM136AQ96C01 138 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms